RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 CGNQ9P2M7 1197 aaKnown RBP11.73□□□□□ -0.53
RDM1-218ENST00000615288 C5P01031 1676 aa11.72□□□□□ -0.53
RDM1-218ENST00000615288 RNMTO43148 476 aaKnown RBP11.72□□□□□ -0.53
RDM1-218ENST00000615288 GABPB1Q06547 395 aaPredicted RBP11.72□□□□□ -0.53
RDM1-218ENST00000615288 TOB2Q14106 344 aaPredicted RBP11.72□□□□□ -0.53
RDM1-218ENST00000615288 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
RDM1-218ENST00000615288 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
RDM1-218ENST00000615288 PYCARDQ9ULZ3 195 aa11.72□□□□□ -0.53
RDM1-218ENST00000615288 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
RDM1-218ENST00000615288 MAP3K2Q9Y2U5 619 aa11.72□□□□□ -0.53
RDM1-218ENST00000615288 RIOK3O14730 519 aaKnown RBP11.71□□□□□ -0.53
RDM1-218ENST00000615288 SOX12O15370 315 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 AP5Z1O43299 807 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 TAF5LO75529 589 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 SASH1O94885 1247 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 MAP4K4O95819 1239 aaPredicted RBP11.71□□□□□ -0.53
RDM1-218ENST00000615288 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.53
RDM1-218ENST00000615288 LIG1P18858 919 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 GSDMDP57764 484 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 NEXNQ0ZGT2 675 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 ANO6Q4KMQ2 910 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 ZSCAN25Q6NSZ9 544 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 ZNF396Q96N95 335 aaPredicted RBP11.71□□□□□ -0.53
RDM1-218ENST00000615288 SLC26A8Q96RN1 970 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 BPIFA3Q9BQP9 254 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 FSD1Q9BTV5 496 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 AGXT2Q9BYV1 514 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 DACT1Q9NYF0 836 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 OGFRQ9NZT2 677 aa11.71□□□□□ -0.53
RDM1-218ENST00000615288 PKD1L3Q7Z443 1732 aa11.71□□□□□ -0.54
RDM1-218ENST00000615288 DDX60Q8IY21 1712 aaKnown RBP11.71□□□□□ -0.54
RDM1-218ENST00000615288 RGPD2P0DJD1 1756 aa11.7□□□□□ -0.54
RDM1-218ENST00000615288 NUTM2FA1L443 756 aa11.7□□□□□ -0.54
RDM1-218ENST00000615288 PFKFB2O60825 505 aa11.7□□□□□ -0.54
RDM1-218ENST00000615288 ZNF165P49910 485 aa11.7□□□□□ -0.54
RDM1-218ENST00000615288 RABL6Q3YEC7 729 aaPredicted RBP11.7□□□□□ -0.54
RDM1-218ENST00000615288 NUTM2GQ5VZR2 741 aa11.7□□□□□ -0.54
RDM1-218ENST00000615288 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
RDM1-218ENST00000615288 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
RDM1-218ENST00000615288 GPR108Q9NPR9 543 aa11.7□□□□□ -0.54
RDM1-218ENST00000615288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.7□□□□□ -0.54
RDM1-218ENST00000615288 IMPACTQ9P2X3 320 aa11.7□□□□□ -0.54
RDM1-218ENST00000615288 RCOR1Q9UKL0 485 aa11.7□□□□□ -0.54
RDM1-218ENST00000615288 ARFGEF2Q9Y6D5 1785 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 ABCC12Q96J65 1359 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 A0A0D9SFI3 127 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 GOLGA6L19H0YKK7 550 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 MYO1BO43795 1136 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 EIF2S2P20042 333 aaKnown RBP11.69□□□□□ -0.54
RDM1-218ENST00000615288 PTGS1P23219 599 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 FOXD4L6Q3SYB3 417 aaPredicted RBP11.69□□□□□ -0.54
RDM1-218ENST00000615288 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 FOXD4L3Q6VB84 417 aaPredicted RBP11.69□□□□□ -0.54
RDM1-218ENST00000615288 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 DSCC1Q9BVC3 393 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
RDM1-218ENST00000615288 A0A1W2PQ27 194 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 A0A1W2PQ64 194 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 A0A1W2PQD8 194 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 IQCB1Q15051 598 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 CCDC73Q6ZRK6 1079 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 NECAB1Q8N987 351 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 CCDC112Q8NEF3 446 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 KAZALD1Q96I82 304 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 SUCLG2Q96I99 432 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 FAM227BQ96M60 508 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 ZNF830Q96NB3 372 aaPredicted RBP11.68□□□□□ -0.54
RDM1-218ENST00000615288 TRIM5Q9C035 493 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 BICC1Q9H694 974 aaKnown RBP11.68□□□□□ -0.54
RDM1-218ENST00000615288 ALS2Q96Q42 1657 aa11.68□□□□□ -0.54
RDM1-218ENST00000615288 GLI3P10071 1580 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 WDR19Q8NEZ3 1342 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 SALL1Q9NSC2 1324 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 NEURL1BA8MQ27 555 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 CCP110O43303 1012 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 NRDCO43847 1150 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 CPA1P15085 419 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 EVCP57679 992 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 FAM160A1Q05DH4 1040 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 NCBP1Q09161 790 aaKnown RBP11.67□□□□□ -0.54
RDM1-218ENST00000615288 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
RDM1-218ENST00000615288 CCDC186Q7Z3E2 898 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 LUZP1Q86V48 1076 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 ARHGEF25Q86VW2 580 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 CEP57L1Q8IYX8 460 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 CCDC150Q8NCX0 1101 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.67□□□□□ -0.54
RDM1-218ENST00000615288 BRF1Q92994 677 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 HAUS7Q99871 368 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
RDM1-218ENST00000615288 LGR6Q9HBX8 967 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 HELLSQ9NRZ9 838 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 ZNF609O15014 1411 aa11.67□□□□□ -0.54
RDM1-218ENST00000615288 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms