RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ZFYVE27Q5T4F4 411 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 ADGRB3O60242 1522 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 PDE4CQ08493 712 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 GPR162Q16538 588 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 BRDTQ58F21 947 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 LARP1BQ659C4 914 aaKnown RBP11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 DPP8Q6V1X1 898 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 KIF4AO95239 1232 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 LTKP29376 864 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 ZNF790Q6PG37 636 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 TTC41PQ6P2S7 1318 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 PARD3Q8TEW0 1356 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 WDR66Q8TBY9 1149 aa11.34□□□□□ -0.59
TNFRSF9-204ENST00000615230 ATP2B1P20020 1258 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 KIF22Q14807 665 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 SLC5A4Q9NY91 659 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 EXOC6BQ9Y2D4 811 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 SPATA31A6Q5VVP1 1343 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 NLRP5P59047 1200 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 K7ELQ4 463 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 ACBD3Q9H3P7 528 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 VEZTQ9HBM0 779 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 MROH5Q6ZUA9 1318 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 H7C1D1 291 aa11.33□□□□□ -0.6
TNFRSF9-204ENST00000615230 NCBP1Q09161 790 aaKnown RBP11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 CERKQ8TCT0 537 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 LARGE2Q8N3Y3 721 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 CALML4Q96GE6 196 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 DRC1Q96MC2 740 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 AS3MTQ9HBK9 375 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 INSRP06213 1382 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 UFL1O94874 794 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 SLC39A6Q13433 755 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 USP37Q86T82 979 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 CCDC8Q9H0W5 538 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 AATKQ6ZMQ8 1374 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 IQGAP3Q86VI3 1631 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 GOLIM4O00461 696 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 FERMT2Q96AC1 680 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 GLT8D2Q9H1C3 349 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 ARHGEF10LQ9HCE6 1279 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 CASTP20810 708 aaKnown RBP11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 PABPC4Q13310 644 aaKnown RBP eCLIP11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
TNFRSF9-204ENST00000615230 NEBLO76041 1014 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 ATP8B2P98198 1209 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 NSFL1CQ9UNZ2 370 aaKnown RBP11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 JCADQ9P266 1359 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 F6X3S4 739 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 TMEM67Q5HYA8 995 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 ME1P48163 572 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 STK3Q13188 491 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 PTPRTO14522 1441 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 OTUD7BQ6GQQ9 843 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 TANGO6Q9C0B7 1094 aa11.31□□□□□ -0.6
TNFRSF9-204ENST00000615230 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 CETN2P41208 172 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 RAD50Q92878 1312 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 ATP2B4P23634 1241 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 CETN1Q12798 172 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 CC2D2BQ6DHV5 1058 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 MCM5P33992 734 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 FOXD4L6Q3SYB3 417 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 FOXD4L3Q6VB84 417 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 HIBADHP31937 336 aaKnown RBP11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 RSPH6AQ9H0K4 717 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 AGLP35573 1532 aa11.3□□□□□ -0.6
TNFRSF9-204ENST00000615230 LAMC1P11047 1609 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 KDM4AO75164 1064 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 RBM28Q9NW13 759 aaKnown RBP11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 IL13P35225 146 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 WTAPQ15007 396 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 TCP11L1Q9NUJ3 509 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 PRPF40BQ6NWY9 871 aaKnown RBP11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 PPFIBP1Q86W92 1011 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 MPNDQ8N594 471 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 ZNF397Q8NF99 534 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 SPATA32Q96LK8 384 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 ERLIN2O94905 339 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 IFIT1BQ5T764 474 aaKnown RBP11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 HOMER1Q86YM7 354 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 RHPN1Q8TCX5 695 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 C8orf76Q96K31 380 aa11.29□□□□□ -0.6
TNFRSF9-204ENST00000615230 ADGRL3Q9HAR2 1447 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms