RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 SAGE1Q9NXZ1 904 aa9.75□□□□□ -0.85
FAM228B-209ENST00000615135 CACNA1SQ13698 1873 aa9.74□□□□□ -0.85
FAM228B-209ENST00000615135 G3V3G9 751 aa9.74□□□□□ -0.85
FAM228B-209ENST00000615135 TRAF5O00463 557 aa9.74□□□□□ -0.85
FAM228B-209ENST00000615135 C7P10643 843 aa9.74□□□□□ -0.85
FAM228B-209ENST00000615135 MTHFSP49914 203 aa9.74□□□□□ -0.85
FAM228B-209ENST00000615135 NOGQ13253 232 aa9.74□□□□□ -0.85
FAM228B-209ENST00000615135 AMOTQ4VCS5 1084 aa9.74□□□□□ -0.85
FAM228B-209ENST00000615135 CC2D1BQ5T0F9 858 aaKnown RBP9.74□□□□□ -0.85
FAM228B-209ENST00000615135 USP50Q70EL3 339 aaPredicted RBP9.74□□□□□ -0.85
FAM228B-209ENST00000615135 ZNF277Q9NRM2 450 aaPredicted RBP9.74□□□□□ -0.85
FAM228B-209ENST00000615135 ZBTB1Q9Y2K1 713 aa9.74□□□□□ -0.85
FAM228B-209ENST00000615135 FXR1P51114 621 aaKnown RBP eCLIP9.73□□□□□ -0.85
FAM228B-209ENST00000615135 EIF5P55010 431 aaKnown RBP9.73□□□□□ -0.85
FAM228B-209ENST00000615135 TBC1D9BQ66K14 1250 aa9.73□□□□□ -0.85
FAM228B-209ENST00000615135 RTKN2Q8IZC4 609 aa9.73□□□□□ -0.85
FAM228B-209ENST00000615135 KNSTRNQ9Y448 316 aa9.73□□□□□ -0.85
FAM228B-209ENST00000615135 A0A087WZG4 1122 aa9.72□□□□□ -0.85
FAM228B-209ENST00000615135 KLRG2A4D1S0 409 aaPredicted RBP9.72□□□□□ -0.85
FAM228B-209ENST00000615135 IARSP41252 1262 aaKnown RBP9.72□□□□□ -0.85
FAM228B-209ENST00000615135 EPS15P42566 896 aa9.72□□□□□ -0.85
FAM228B-209ENST00000615135 SCNN1DP51172 638 aa9.72□□□□□ -0.85
FAM228B-209ENST00000615135 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
FAM228B-209ENST00000615135 BICDL1Q6ZP65 573 aa9.72□□□□□ -0.85
FAM228B-209ENST00000615135 ZIC5Q96T25 663 aa9.72□□□□□ -0.85
FAM228B-209ENST00000615135 PANK3Q9H999 370 aa9.72□□□□□ -0.85
FAM228B-209ENST00000615135 PGAP2Q9UHJ9 254 aa9.72□□□□□ -0.85
FAM228B-209ENST00000615135 PPM1GO15355 546 aaPredicted RBP9.71□□□□□ -0.86
FAM228B-209ENST00000615135 CELF2O95319 508 aaKnown RBP9.71□□□□□ -0.86
FAM228B-209ENST00000615135 LMOD1P29536 600 aaPredicted RBP9.71□□□□□ -0.86
FAM228B-209ENST00000615135 EIF4A2Q14240 407 aaKnown RBP9.71□□□□□ -0.86
FAM228B-209ENST00000615135 CTU1Q7Z7A3 348 aaKnown RBP9.71□□□□□ -0.86
FAM228B-209ENST00000615135 SLC24A3Q9HC58 644 aa9.71□□□□□ -0.86
FAM228B-209ENST00000615135 POLKQ9UBT6 870 aa9.71□□□□□ -0.86
FAM228B-209ENST00000615135 SNED1Q8TER0 1413 aa9.71□□□□□ -0.86
FAM228B-209ENST00000615135 CUL9Q8IWT3 2517 aa9.71□□□□□ -0.86
FAM228B-209ENST00000615135 TULP1O00294 542 aaPredicted RBP9.7□□□□□ -0.86
FAM228B-209ENST00000615135 PKN2Q16513 984 aaKnown RBP9.7□□□□□ -0.86
FAM228B-209ENST00000615135 AKAP4Q5JQC9 854 aa9.7□□□□□ -0.86
FAM228B-209ENST00000615135 SYNE4Q8N205 404 aa9.7□□□□□ -0.86
FAM228B-209ENST00000615135 CCDC24Q8N4L8 307 aa9.7□□□□□ -0.86
FAM228B-209ENST00000615135 CNBD1Q8NA66 436 aa9.7□□□□□ -0.86
FAM228B-209ENST00000615135 PSMD1Q99460 953 aa9.7□□□□□ -0.86
FAM228B-209ENST00000615135 HPS5Q9UPZ3 1129 aa9.7□□□□□ -0.86
FAM228B-209ENST00000615135 BCORQ6W2J9 1755 aa9.7□□□□□ -0.86
FAM228B-209ENST00000615135 SCN11AQ9UI33 1791 aa9.7□□□□□ -0.86
FAM228B-209ENST00000615135 POTEB2H3BUK9 544 aa9.69□□□□□ -0.86
FAM228B-209ENST00000615135 DLL1O00548 723 aa9.69□□□□□ -0.86
FAM228B-209ENST00000615135 NPR1P16066 1061 aa9.69□□□□□ -0.86
FAM228B-209ENST00000615135 EIF6P56537 245 aaKnown RBP9.69□□□□□ -0.86
FAM228B-209ENST00000615135 WDR43Q15061 677 aaKnown RBP eCLIP9.69□□□□□ -0.86
FAM228B-209ENST00000615135 JDP2Q8WYK2 163 aa9.69□□□□□ -0.86
FAM228B-209ENST00000615135 CARD14Q9BXL6 1004 aa9.69□□□□□ -0.86
FAM228B-209ENST00000615135 NPC1L1Q9UHC9 1359 aa9.68□□□□□ -0.86
FAM228B-209ENST00000615135 FAM155AB1AL88 458 aaPredicted RBP9.68□□□□□ -0.86
FAM228B-209ENST00000615135 ST5P78524 1137 aa9.68□□□□□ -0.86
FAM228B-209ENST00000615135 PDIA6Q15084 440 aa9.68□□□□□ -0.86
FAM228B-209ENST00000615135 C1orf141Q5JVX7 400 aa9.68□□□□□ -0.86
FAM228B-209ENST00000615135 SETDB2Q96T68 719 aa9.68□□□□□ -0.86
FAM228B-209ENST00000615135 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
FAM228B-209ENST00000615135 RNF186Q9NXI6 227 aa9.68□□□□□ -0.86
FAM228B-209ENST00000615135 COL4A5P29400 1685 aa9.67□□□□□ -0.86
FAM228B-209ENST00000615135 SCN7AQ01118 1682 aa9.67□□□□□ -0.86
FAM228B-209ENST00000615135 AKAP11Q9UKA4 1901 aa9.67□□□□□ -0.86
FAM228B-209ENST00000615135 CANXP27824 592 aaKnown RBP9.67□□□□□ -0.86
FAM228B-209ENST00000615135 OLFM4Q6UX06 510 aa9.67□□□□□ -0.86
FAM228B-209ENST00000615135 ADARB2Q9NS39 739 aaKnown RBP9.67□□□□□ -0.86
FAM228B-209ENST00000615135 NUDCQ9Y266 331 aa9.67□□□□□ -0.86
FAM228B-209ENST00000615135 GJA3Q9Y6H8 435 aa9.67□□□□□ -0.86
FAM228B-209ENST00000615135 STARD3NLO95772 234 aa9.66□□□□□ -0.86
FAM228B-209ENST00000615135 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
FAM228B-209ENST00000615135 GLIS2Q9BZE0 524 aaPredicted RBP9.66□□□□□ -0.86
FAM228B-209ENST00000615135 GPRC5DQ9NZD1 345 aa9.66□□□□□ -0.86
FAM228B-209ENST00000615135 MRC1P22897 1456 aa9.66□□□□□ -0.86
FAM228B-209ENST00000615135 TRPA1O75762 1119 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 ZMYND10O75800 440 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 CAMTA2O94983 1202 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 ALDH1B1P30837 517 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 IL6STP40189 918 aaPredicted RBP9.65□□□□□ -0.86
FAM228B-209ENST00000615135 IRX6P78412 446 aaPredicted RBP9.65□□□□□ -0.86
FAM228B-209ENST00000615135 MAP3K9P80192 1104 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 KIF23Q02241 960 aaPredicted RBP9.65□□□□□ -0.86
FAM228B-209ENST00000615135 SLC39A6Q13433 755 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 GRIPAP1Q4V328 841 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 CC2D2BQ6DHV5 1058 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 RGMBQ6NW40 437 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 CDC37L1Q7L3B6 337 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 PNISRQ8TF01 805 aaKnown RBP9.65□□□□□ -0.86
FAM228B-209ENST00000615135 CCDC102AQ96A19 550 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.86
FAM228B-209ENST00000615135 TRIOBPQ9H2D6 2365 aa9.64□□□□□ -0.87
FAM228B-209ENST00000615135 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
FAM228B-209ENST00000615135 HUNKP57058 714 aa9.64□□□□□ -0.87
FAM228B-209ENST00000615135 OXER1Q8TDS5 423 aa9.64□□□□□ -0.87
FAM228B-209ENST00000615135 LGR6Q9HBX8 967 aa9.64□□□□□ -0.87
FAM228B-209ENST00000615135 UBR2Q8IWV8 1755 aa9.64□□□□□ -0.87
FAM228B-209ENST00000615135 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
FAM228B-209ENST00000615135 PER1O15534 1290 aaPredicted RBP9.63□□□□□ -0.87
FAM228B-209ENST00000615135 CLEC4GQ6UXB4 293 aa9.63□□□□□ -0.87
FAM228B-209ENST00000615135 CSRNP1Q96S65 589 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms