RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, human

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCUBE1-208	ENST00000615096	CSF1R	P07333	972 aa		27.88	■■■□□ 2.05
SCUBE1-208	ENST00000615096	NPR1	P16066	1061 aa		27.87	■■■□□ 2.05
SCUBE1-208	ENST00000615096	HOXA10	P31260	410 aa	Predicted RBP	27.87	■■■□□ 2.05
SCUBE1-208	ENST00000615096	MASTL	Q96GX5	879 aa		27.87	■■■□□ 2.05
SCUBE1-208	ENST00000615096	DLEC1	Q9Y238	1755 aa		27.86	■■■□□ 2.05
SCUBE1-208	ENST00000615096	STYK1	Q6J9G0	422 aa		27.86	■■■□□ 2.05
SCUBE1-208	ENST00000615096	BICC1	Q9H694	974 aa	Known RBP	27.86	■■■□□ 2.05
SCUBE1-208	ENST00000615096	HDAC5	Q9UQL6	1122 aa		27.86	■■■□□ 2.05
SCUBE1-208	ENST00000615096	RABL6	Q3YEC7	729 aa	Predicted RBP	27.85	■■■□□ 2.05
SCUBE1-208	ENST00000615096	CCDC152	Q4G0S7	254 aa		27.85	■■■□□ 2.05
SCUBE1-208	ENST00000615096	ANKRD44	Q8N8A2	993 aa		27.85	■■■□□ 2.05
SCUBE1-208	ENST00000615096	RPGR	Q92834	1020 aa	Known RBP	27.85	■■■□□ 2.05
SCUBE1-208	ENST00000615096	LRRFIP2	Q9Y608	721 aa	Known RBP	27.85	■■■□□ 2.05
SCUBE1-208	ENST00000615096	LMBR1L	Q6UX01	489 aa		27.84	■■■□□ 2.05
SCUBE1-208	ENST00000615096	RTL9	Q8NET4	1388 aa		27.84	■■■□□ 2.05
SCUBE1-208	ENST00000615096	MYH3	P11055	1940 aa		27.83	■■■□□ 2.05
SCUBE1-208	ENST00000615096	GNAI2	P04899	355 aa		27.83	■■■□□ 2.05
SCUBE1-208	ENST00000615096	ZNF622	Q969S3	477 aa	Known RBP eCLIP	27.83	■■■□□ 2.05
SCUBE1-208	ENST00000615096	RBM17	Q96I25	401 aa	Known RBP	27.83	■■■□□ 2.05
SCUBE1-208	ENST00000615096	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.83	■■■□□ 2.05
SCUBE1-208	ENST00000615096	CRAMP1	Q96RY5	1269 aa		27.83	■■■□□ 2.05
SCUBE1-208	ENST00000615096	GREM2	Q9H772	168 aa		27.83	■■■□□ 2.05
SCUBE1-208	ENST00000615096	ZBTB40	Q9NUA8	1239 aa		27.83	■■■□□ 2.05
SCUBE1-208	ENST00000615096	CRBN	Q96SW2	442 aa		27.82	■■■□□ 2.04
SCUBE1-208	ENST00000615096	PIM2	Q9P1W9	311 aa		27.82	■■■□□ 2.04
SCUBE1-208	ENST00000615096	DDX46	Q7L014	1031 aa	Known RBP	27.81	■■■□□ 2.04
SCUBE1-208	ENST00000615096	CHMP4B	Q9H444	224 aa	Known RBP	27.81	■■■□□ 2.04
SCUBE1-208	ENST00000615096	SEC31B	Q9NQW1	1179 aa		27.81	■■■□□ 2.04
SCUBE1-208	ENST00000615096	ALDH1B1	P30837	517 aa		27.8	■■■□□ 2.04
SCUBE1-208	ENST00000615096	FAM161A	Q3B820	660 aa		27.8	■■■□□ 2.04
SCUBE1-208	ENST00000615096	CNKSR1	Q969H4	720 aa		27.8	■■■□□ 2.04
SCUBE1-208	ENST00000615096	BRCA1	P38398	1863 aa	Known RBP	27.8	■■■□□ 2.04
SCUBE1-208	ENST00000615096	TTLL6	Q8N841	843 aa		27.79	■■■□□ 2.04
SCUBE1-208	ENST00000615096	COL4A1	P02462	1669 aa		27.78	■■■□□ 2.04
SCUBE1-208	ENST00000615096	ITGA6	P23229	1130 aa		27.78	■■■□□ 2.04
SCUBE1-208	ENST00000615096	GRAP	Q13588	217 aa		27.78	■■■□□ 2.04
SCUBE1-208	ENST00000615096	GRAPL	Q8TC17	118 aa	Predicted RBP	27.78	■■■□□ 2.04
SCUBE1-208	ENST00000615096	C1orf115	Q9H7X2	142 aa		27.78	■■■□□ 2.04
SCUBE1-208	ENST00000615096	MTX1	Q13505	466 aa		27.77	■■■□□ 2.04
SCUBE1-208	ENST00000615096	CELF1	Q92879	486 aa	Known RBP	27.77	■■■□□ 2.04
SCUBE1-208	ENST00000615096	CHMP3	Q9Y3E7	222 aa		27.77	■■■□□ 2.04
SCUBE1-208	ENST00000615096	PRPF40B	Q6NWY9	871 aa	Known RBP	27.76	■■■□□ 2.03
SCUBE1-208	ENST00000615096	WWC3	Q9ULE0	1092 aa		27.76	■■■□□ 2.03
SCUBE1-208	ENST00000615096	IFIT5	Q13325	482 aa	Known RBP	27.75	■■■□□ 2.03
SCUBE1-208	ENST00000615096	DALRD3	Q5D0E6	543 aa	Known RBP	27.75	■■■□□ 2.03
SCUBE1-208	ENST00000615096	ANKRD18B	A2A2Z9	1011 aa		27.74	■■■□□ 2.03
SCUBE1-208	ENST00000615096	BBOX1	O75936	387 aa		27.74	■■■□□ 2.03
SCUBE1-208	ENST00000615096	RPS8	P62241	208 aa	Known RBP	27.74	■■■□□ 2.03
SCUBE1-208	ENST00000615096	CCDC57	Q2TAC2	916 aa		27.74	■■■□□ 2.03
SCUBE1-208	ENST00000615096	CDC5L	Q99459	802 aa	Known RBP	27.74	■■■□□ 2.03
SCUBE1-208	ENST00000615096	TAF1	P21675	1872 aa		27.73	■■■□□ 2.03
SCUBE1-208	ENST00000615096	IRX6	P78412	446 aa	Predicted RBP	27.73	■■■□□ 2.03
SCUBE1-208	ENST00000615096	C7orf43	Q8WVR3	580 aa		27.73	■■■□□ 2.03
SCUBE1-208	ENST00000615096	SLX4	Q8IY92	1834 aa		27.73	■■■□□ 2.03
SCUBE1-208	ENST00000615096	SRCAP	Q6ZRS2	3230 aa		27.72	■■■□□ 2.03
SCUBE1-208	ENST00000615096	RFX5	P48382	616 aa	Predicted RBP	27.72	■■■□□ 2.03
SCUBE1-208	ENST00000615096	ANKRD18A	Q8IVF6	992 aa		27.72	■■■□□ 2.03
SCUBE1-208	ENST00000615096	BCS1L	Q9Y276	419 aa		27.72	■■■□□ 2.03
SCUBE1-208	ENST00000615096	PPEF1	O14829	653 aa	Predicted RBP	27.71	■■■□□ 2.03
SCUBE1-208	ENST00000615096	ATP8B2	P98198	1209 aa		27.71	■■■□□ 2.03
SCUBE1-208	ENST00000615096	CEP85	Q6P2H3	762 aa		27.71	■■■□□ 2.03
SCUBE1-208	ENST00000615096	EXOC6	Q8TAG9	804 aa		27.71	■■■□□ 2.03
SCUBE1-208	ENST00000615096	PNMA6E	A0A0J9YXQ4	647 aa		27.7	■■■□□ 2.02
SCUBE1-208	ENST00000615096	CACNA1S	Q13698	1873 aa		27.7	■■■□□ 2.02
SCUBE1-208	ENST00000615096	SRGAP3	O43295	1099 aa		27.69	■■■□□ 2.02
SCUBE1-208	ENST00000615096	TMC4	Q7Z404	712 aa		27.69	■■■□□ 2.02
SCUBE1-208	ENST00000615096	SLC51A	Q86UW1	340 aa		27.69	■■■□□ 2.02
SCUBE1-208	ENST00000615096	ZNF594	Q96JF6	807 aa	Predicted RBP	27.69	■■■□□ 2.02
SCUBE1-208	ENST00000615096	YBX3	P16989	372 aa	Known RBP eCLIP	27.68	■■■□□ 2.02
SCUBE1-208	ENST00000615096	IGHMBP2	P38935	993 aa	Known RBP	27.68	■■■□□ 2.02
SCUBE1-208	ENST00000615096	PTPN12	Q05209	780 aa	Known RBP	27.68	■■■□□ 2.02
SCUBE1-208	ENST00000615096	POLA2	Q14181	598 aa		27.68	■■■□□ 2.02
SCUBE1-208	ENST00000615096	RPAP2	Q8IXW5	612 aa	Predicted RBP	27.68	■■■□□ 2.02
SCUBE1-208	ENST00000615096	BSDC1	Q9NW68	430 aa	Predicted RBP	27.68	■■■□□ 2.02
SCUBE1-208	ENST00000615096	ATP6V0A2	Q9Y487	856 aa		27.68	■■■□□ 2.02
SCUBE1-208	ENST00000615096	C21orf2	O43822	256 aa		27.67	■■■□□ 2.02
SCUBE1-208	ENST00000615096	AAMP	Q13685	434 aa		27.67	■■■□□ 2.02
SCUBE1-208	ENST00000615096	SP8	Q8IXZ3	490 aa		27.67	■■■□□ 2.02
SCUBE1-208	ENST00000615096	SSH3	Q8TE77	659 aa		27.67	■■■□□ 2.02
SCUBE1-208	ENST00000615096	TAF7L	Q5H9L4	462 aa		27.66	■■■□□ 2.02
SCUBE1-208	ENST00000615096	OLFM4	Q6UX06	510 aa		27.66	■■■□□ 2.02
SCUBE1-208	ENST00000615096	SIRT2	Q8IXJ6	389 aa		27.66	■■■□□ 2.02
SCUBE1-208	ENST00000615096	KLHDC4	Q8TBB5	520 aa		27.66	■■■□□ 2.02
SCUBE1-208	ENST00000615096	ZNF219	Q9P2Y4	722 aa	Predicted RBP	27.66	■■■□□ 2.02
SCUBE1-208	ENST00000615096	ARFGEF1	Q9Y6D6	1849 aa		27.66	■■■□□ 2.02
SCUBE1-208	ENST00000615096	MPHOSPH8	Q99549	860 aa		27.65	■■■□□ 2.02
SCUBE1-208	ENST00000615096	LRRC37A	A6NMS7	1700 aa		27.64	■■■□□ 2.02
SCUBE1-208	ENST00000615096	LDHAL6A	Q6ZMR3	332 aa		27.64	■■■□□ 2.02
SCUBE1-208	ENST00000615096	PELP1	Q8IZL8	1130 aa	Known RBP	27.64	■■■□□ 2.02
SCUBE1-208	ENST00000615096	COPRS	Q9NQ92	184 aa		27.64	■■■□□ 2.02
SCUBE1-208	ENST00000615096	SNED1	Q8TER0	1413 aa		27.64	■■■□□ 2.02
SCUBE1-208	ENST00000615096	CC2D2B	Q6DHV5	1058 aa		27.63	■■■□□ 2.01
SCUBE1-208	ENST00000615096	PUS3	Q9BZE2	481 aa	Known RBP	27.63	■■■□□ 2.01
SCUBE1-208	ENST00000615096	PA2G4	Q9UQ80	394 aa	Known RBP	27.63	■■■□□ 2.01
SCUBE1-208	ENST00000615096	PCDHB15	Q9Y5E8	787 aa		27.63	■■■□□ 2.01
SCUBE1-208	ENST00000615096	SPEF2	Q9C093	1822 aa		27.62	■■■□□ 2.01
SCUBE1-208	ENST00000615096	GPR162	Q16538	588 aa		27.62	■■■□□ 2.01
SCUBE1-208	ENST00000615096	SOGA3	Q5TF21	947 aa		27.62	■■■□□ 2.01
SCUBE1-208	ENST00000615096	MINPP1	Q9UNW1	487 aa		27.62	■■■□□ 2.01
SCUBE1-208	ENST00000615096	LRRC24	Q50LG9	513 aa		27.61	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms