RNA–Protein interactions for RNA: ENST00000614860.1

USPL1-203, Transcript of ubiquitin specific peptidase like 1, humanhuman

TSL 1 (best) BASIC

Gene USPL1, Length 4,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-203ENST00000614860 USP54Q70EL1 1684 aa8.55□□□□□ -1.04
USPL1-203ENST00000614860 CASTP20810 708 aaKnown RBP8.54□□□□□ -1.04
USPL1-203ENST00000614860 PTPN12Q05209 780 aaKnown RBP8.54□□□□□ -1.04
USPL1-203ENST00000614860 RRP12Q5JTH9 1297 aaKnown RBP8.54□□□□□ -1.04
USPL1-203ENST00000614860 CCDC158Q5M9N0 1113 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 RASSF8Q8NHQ8 419 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 LRRC2Q9BYS8 371 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 USP21Q9UK80 565 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 ALS2Q96Q42 1657 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 KCNQ4P56696 695 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 ST3GAL1Q11201 340 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 METTL24Q5JXM2 366 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 TTC39AQ5SRH9 613 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 DDX46Q7L014 1031 aaKnown RBP8.54□□□□□ -1.04
USPL1-203ENST00000614860 SNAP23O00161 211 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 MARCH6O60337 910 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 HSPA4P34932 840 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 SYNE3Q6ZMZ3 975 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 GBP4Q96PP9 640 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 METTL22Q9BUU2 404 aaPredicted RBP8.54□□□□□ -1.04
USPL1-203ENST00000614860 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 TCHHQ07283 1943 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 CPLX1O14810 134 aa8.54□□□□□ -1.04
USPL1-203ENST00000614860 IGHMBP2P38935 993 aaKnown RBP8.54□□□□□ -1.04
USPL1-203ENST00000614860 PRIM1P49642 420 aaKnown RBP8.54□□□□□ -1.04
USPL1-203ENST00000614860 AKAP17AQ02040 695 aaKnown RBP8.54□□□□□ -1.04
USPL1-203ENST00000614860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.53□□□□□ -1.04
USPL1-203ENST00000614860 IDH1O75874 414 aaKnown RBP8.53□□□□□ -1.04
USPL1-203ENST00000614860 HOXB7P09629 217 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 RFX5P48382 616 aaPredicted RBP8.53□□□□□ -1.04
USPL1-203ENST00000614860 PI16Q6UXB8 463 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 FAM184AQ8NB25 1140 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 DCAF5Q96JK2 942 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 ARID3AQ99856 593 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 ECHDC1Q9NTX5 307 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 TFCP2L1Q9NZI6 479 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 ANKIB1Q9P2G1 1089 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 COL18A1P39060 1754 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 CACNA1FO60840 1977 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 STK3Q13188 491 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 RALYLQ86SE5 291 aaKnown RBP8.53□□□□□ -1.04
USPL1-203ENST00000614860 FAM89AQ96GI7 184 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 RAB11FIP3O75154 756 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 ATP2B2Q01814 1243 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 JAKMIP1Q96N16 626 aaKnown RBP8.53□□□□□ -1.04
USPL1-203ENST00000614860 GRPEL1Q9HAV7 217 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 SNRKQ9NRH2 765 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 TMEM63CQ9P1W3 806 aa8.53□□□□□ -1.04
USPL1-203ENST00000614860 IFIT5Q13325 482 aaKnown RBP8.52□□□□□ -1.05
USPL1-203ENST00000614860 CCDC83Q8IWF9 413 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 ZNF622Q969S3 477 aaKnown RBP eCLIP8.52□□□□□ -1.05
USPL1-203ENST00000614860 SLC4A9Q96Q91 983 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 TNS3Q68CZ2 1445 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 MTX1Q13505 466 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 CHST3Q7LGC8 479 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 CNTROBQ8N137 903 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 SIPA1L3O60292 1781 aaPredicted RBP8.52□□□□□ -1.05
USPL1-203ENST00000614860 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 H3BQV1 296 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 HLFQ16534 295 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 RNF214Q8ND24 703 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 GNL3LQ9NVN8 582 aaKnown RBP8.52□□□□□ -1.05
USPL1-203ENST00000614860 LRP2BPQ9P2M1 347 aa8.52□□□□□ -1.05
USPL1-203ENST00000614860 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.05
USPL1-203ENST00000614860 RAD50Q92878 1312 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 ALDH1L1O75891 902 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 FOXO4P98177 505 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
USPL1-203ENST00000614860 RNF20Q5VTR2 975 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 NBPF5PQ86XG9 351 aaPredicted RBP8.51□□□□□ -1.05
USPL1-203ENST00000614860 DNAJC10Q8IXB1 793 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 PIGBQ92521 554 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 RAI14Q9P0K7 980 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 DDX11L8A8MPP1 907 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 CASP7P55210 303 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 LDHAL6AQ6ZMR3 332 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 ZSCAN29Q8IWY8 852 aaPredicted RBP8.51□□□□□ -1.05
USPL1-203ENST00000614860 NKX2-3Q8TAU0 364 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 TTC14Q96N46 770 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 CTDP1Q9Y5B0 961 aaPredicted RBP8.51□□□□□ -1.05
USPL1-203ENST00000614860 RBM8AQ9Y5S9 174 aaKnown RBP8.51□□□□□ -1.05
USPL1-203ENST00000614860 PXDNLA1KZ92 1463 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 SYCE3A1L190 88 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 WTIPA6NIX2 430 aaPredicted RBP8.51□□□□□ -1.05
USPL1-203ENST00000614860 IKQ13123 557 aaPredicted RBP8.51□□□□□ -1.05
USPL1-203ENST00000614860 ME3Q16798 604 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 FERMT3Q86UX7 667 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 ERC1Q8IUD2 1116 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 CCDC24Q8N4L8 307 aa8.51□□□□□ -1.05
USPL1-203ENST00000614860 GLRX3O76003 335 aaKnown RBP8.5□□□□□ -1.05
USPL1-203ENST00000614860 CPLX2Q6PUV4 134 aaKnown RBP8.5□□□□□ -1.05
USPL1-203ENST00000614860 RBSNQ9H1K0 784 aa8.5□□□□□ -1.05
USPL1-203ENST00000614860 TPCN1Q9ULQ1 816 aa8.5□□□□□ -1.05
USPL1-203ENST00000614860 CNPY2Q9Y2B0 182 aa8.5□□□□□ -1.05
USPL1-203ENST00000614860 ZSCAN23Q3MJ62 389 aa8.5□□□□□ -1.05
USPL1-203ENST00000614860 CREBRFQ8IUR6 639 aa8.5□□□□□ -1.05
USPL1-203ENST00000614860 RPGRQ92834 1020 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms