RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 AK2P54819 239 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 NEXNQ0ZGT2 675 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 POLA2Q14181 598 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 BARGINQ6ZT62 677 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
ATF3-211ENST00000613954 DDB1Q16531 1140 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 RHPN1Q8TCX5 695 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 RUFY2Q8WXA3 655 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 FUCA2Q9BTY2 467 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 METTL22Q9BUU2 404 aaPredicted RBP13.35□□□□□ -0.27
ATF3-211ENST00000613954 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
ATF3-211ENST00000613954 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 C9orf78Q9NZ63 289 aaPredicted RBP13.35□□□□□ -0.27
ATF3-211ENST00000613954 KIF3AQ9Y496 699 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 BCL9O00512 1426 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 SURF6O75683 361 aaKnown RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 CHAF1AQ13111 956 aaPredicted RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 CWF19L2Q2TBE0 894 aaKnown RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 IL25Q9H293 177 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 IL1RAPL2Q9NP60 686 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 PRDM4Q9UKN5 801 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 CCDC9Q9Y3X0 531 aaKnown RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 RUFY3Q7L099 469 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 PPP1R42Q7Z4L9 355 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 TM6SF1Q9BZW5 370 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 ATG3Q9NT62 314 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 ASAP1Q9ULH1 1129 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 UTYO14607 1347 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
ATF3-211ENST00000613954 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
ATF3-211ENST00000613954 VPS53Q5VIR6 699 aa13.33□□□□□ -0.28
ATF3-211ENST00000613954 ZNF830Q96NB3 372 aaPredicted RBP13.33□□□□□ -0.28
ATF3-211ENST00000613954 GRM8O00222 908 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 FIBPO43427 364 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 IGKV5-2P06315 115 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 PLBD2Q8NHP8 589 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 NGLY1Q96IV0 654 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 C8orf37Q96NL8 207 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 MYD88Q99836 296 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 NEURL1BA8MQ27 555 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 GLRX3O76003 335 aaKnown RBP13.32□□□□□ -0.28
ATF3-211ENST00000613954 A1BGP04217 495 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 MTX1Q13505 466 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 VPS72Q15906 364 aa13.32□□□□□ -0.28
ATF3-211ENST00000613954 UTP14CQ5TAP6 766 aaKnown RBP13.32□□□□□ -0.28
ATF3-211ENST00000613954 ARFGEF2Q9Y6D5 1785 aa13.31□□□□□ -0.28
ATF3-211ENST00000613954 BCL9LQ86UU0 1499 aa13.31□□□□□ -0.28
ATF3-211ENST00000613954 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
ATF3-211ENST00000613954 CASTP20810 708 aaKnown RBP13.31□□□□□ -0.28
ATF3-211ENST00000613954 GJB2P29033 226 aa13.31□□□□□ -0.28
ATF3-211ENST00000613954 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
ATF3-211ENST00000613954 KIAA1524Q8TCG1 905 aa13.31□□□□□ -0.28
ATF3-211ENST00000613954 DOT1LQ8TEK3 1739 aa13.31□□□□□ -0.28
ATF3-211ENST00000613954 GCKRQ14397 625 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 KCNB2Q92953 911 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 PDRG1Q9NUG6 133 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 MTMR6Q9Y217 621 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 CCDC171Q6TFL3 1326 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 STARD3NLO95772 234 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 GIMAP6Q6P9H5 292 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 CWC27Q6UX04 472 aaKnown RBP13.3□□□□□ -0.28
ATF3-211ENST00000613954 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
ATF3-211ENST00000613954 FNBP4Q8N3X1 1017 aaPredicted RBP13.3□□□□□ -0.28
ATF3-211ENST00000613954 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
ATF3-211ENST00000613954 SYTL4Q96C24 671 aaPredicted RBP13.3□□□□□ -0.28
ATF3-211ENST00000613954 ELP1O95163 1332 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 MAP4K4O95819 1239 aaPredicted RBP13.29□□□□□ -0.28
ATF3-211ENST00000613954 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 FAM200AQ8TCP9 573 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 GPATCH3Q96I76 525 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 ZSWIM6Q9HCJ5 1215 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
ATF3-211ENST00000613954 PDCP20941 246 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 KRT85P78386 507 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 DNM1Q05193 864 aaKnown RBP13.29□□□□□ -0.28
ATF3-211ENST00000613954 CCDC83Q8IWF9 413 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 SUCLG2Q96I99 432 aa13.29□□□□□ -0.28
ATF3-211ENST00000613954 NUP188Q5SRE5 1749 aa13.28□□□□□ -0.28
ATF3-211ENST00000613954 TTLL7Q6ZT98 887 aa13.28□□□□□ -0.28
ATF3-211ENST00000613954 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
ATF3-211ENST00000613954 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.28□□□□□ -0.28
ATF3-211ENST00000613954 HIP1O00291 1037 aa13.27□□□□□ -0.28
ATF3-211ENST00000613954 DMTNQ08495 405 aa13.27□□□□□ -0.28
ATF3-211ENST00000613954 MAP3K11Q16584 847 aa13.27□□□□□ -0.28
ATF3-211ENST00000613954 ERC1Q8IUD2 1116 aa13.27□□□□□ -0.28
ATF3-211ENST00000613954 CLASRPQ8N2M8 674 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms