RNA–Protein interactions for RNA: ENST00000613776.1

ACACA-229, Transcript of acetyl-CoA carboxylase alpha, human

TSL 2

Gene ACACA, Length 1,372 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-229	ENST00000613776	PRAMEF22	A3QJZ6	481 aa		14.03	□□□□□ -0.16
ACACA-229	ENST00000613776	ZEB1	P37275	1124 aa	Predicted RBP	14.03	□□□□□ -0.16
ACACA-229	ENST00000613776	SULT6B1	Q6IMI4	303 aa		14.03	□□□□□ -0.16
ACACA-229	ENST00000613776	MOB2	Q70IA6	237 aa		14.03	□□□□□ -0.16
ACACA-229	ENST00000613776	DPF3	Q92784	378 aa		14.03	□□□□□ -0.16
ACACA-229	ENST00000613776	CFHR5	Q9BXR6	569 aa		14.03	□□□□□ -0.16
ACACA-229	ENST00000613776	TEX13A	Q9BXU3	409 aa	Predicted RBP	14.03	□□□□□ -0.16
ACACA-229	ENST00000613776	ABCC12	Q96J65	1359 aa		14.02	□□□□□ -0.17
ACACA-229	ENST00000613776	HEG1	Q9ULI3	1381 aa		14.02	□□□□□ -0.17
ACACA-229	ENST00000613776	COL9A1	P20849	921 aa		14.01	□□□□□ -0.17
ACACA-229	ENST00000613776	SLC4A8	Q2Y0W8	1093 aa		14.01	□□□□□ -0.17
ACACA-229	ENST00000613776	NUTM1	Q86Y26	1132 aa		14.01	□□□□□ -0.17
ACACA-229	ENST00000613776	GGA3	Q9NZ52	723 aa		14.01	□□□□□ -0.17
ACACA-229	ENST00000613776	YDJC	A8MPS7	323 aa		14	□□□□□ -0.17
ACACA-229	ENST00000613776	UBE2Q2L	H0YL09	131 aa		14	□□□□□ -0.17
ACACA-229	ENST00000613776	HOXA10	P31260	410 aa	Predicted RBP	14	□□□□□ -0.17
ACACA-229	ENST00000613776	FKBP1B	P68106	108 aa		14	□□□□□ -0.17
ACACA-229	ENST00000613776	SREBF2	Q12772	1141 aa		14	□□□□□ -0.17
ACACA-229	ENST00000613776	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	14	□□□□□ -0.17
ACACA-229	ENST00000613776	SUPT20H	Q8NEM7	779 aa		14	□□□□□ -0.17
ACACA-229	ENST00000613776	ZNF333	Q96JL9	665 aa		14	□□□□□ -0.17
ACACA-229	ENST00000613776	TMX4	Q9H1E5	349 aa	Predicted RBP	14	□□□□□ -0.17
ACACA-229	ENST00000613776	STXBP5L	Q9Y2K9	1186 aa		14	□□□□□ -0.17
ACACA-229	ENST00000613776	ASTN2	O75129	1339 aa	Predicted RBP	14	□□□□□ -0.17
ACACA-229	ENST00000613776	UNC80	Q8N2C7	3258 aa		14	□□□□□ -0.17
ACACA-229	ENST00000613776	SLC24A1	O60721	1099 aa		13.99	□□□□□ -0.17
ACACA-229	ENST00000613776	MYC	P01106	439 aa	Predicted RBP	13.99	□□□□□ -0.17
ACACA-229	ENST00000613776	DEFB123	Q8N688	67 aa		13.99	□□□□□ -0.17
ACACA-229	ENST00000613776	DPF2	Q92785	391 aa		13.99	□□□□□ -0.17
ACACA-229	ENST00000613776	RBM17	Q96I25	401 aa	Known RBP	13.99	□□□□□ -0.17
ACACA-229	ENST00000613776	WTIP	A6NIX2	430 aa	Predicted RBP	13.98	□□□□□ -0.17
ACACA-229	ENST00000613776	KIAA2012	Q0VF49	1180 aa		13.98	□□□□□ -0.17
ACACA-229	ENST00000613776	CD99L2	Q8TCZ2	262 aa		13.98	□□□□□ -0.17
ACACA-229	ENST00000613776	CRAMP1	Q96RY5	1269 aa		13.98	□□□□□ -0.17
ACACA-229	ENST00000613776	KIF7	Q2M1P5	1343 aa		13.98	□□□□□ -0.17
ACACA-229	ENST00000613776	PSMD14	O00487	310 aa		13.97	□□□□□ -0.17
ACACA-229	ENST00000613776	KIF4B	Q2VIQ3	1234 aa		13.97	□□□□□ -0.17
ACACA-229	ENST00000613776	ANKRD13D	Q6ZTN6	518 aa		13.97	□□□□□ -0.17
ACACA-229	ENST00000613776		Q7L0L9	218 aa		13.97	□□□□□ -0.17
ACACA-229	ENST00000613776	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.97	□□□□□ -0.17
ACACA-229	ENST00000613776	ZNF790	Q6PG37	636 aa		13.96	□□□□□ -0.17
ACACA-229	ENST00000613776	ERO1A	Q96HE7	468 aa		13.96	□□□□□ -0.17
ACACA-229	ENST00000613776	EFCC1	Q9HA90	598 aa		13.96	□□□□□ -0.17
ACACA-229	ENST00000613776	RAPGEFL1	Q9UHV5	662 aa		13.96	□□□□□ -0.17
ACACA-229	ENST00000613776	ATP6V0A2	Q9Y487	856 aa		13.96	□□□□□ -0.17
ACACA-229	ENST00000613776		A0A1W2PPC1	479 aa		13.96	□□□□□ -0.18
ACACA-229	ENST00000613776	DPP8	Q6V1X1	898 aa	Predicted RBP	13.96	□□□□□ -0.18
ACACA-229	ENST00000613776	RIC1	Q4ADV7	1423 aa		13.96	□□□□□ -0.18
ACACA-229	ENST00000613776	ZNF609	O15014	1411 aa		13.95	□□□□□ -0.18
ACACA-229	ENST00000613776	ERBB4	Q15303	1308 aa		13.95	□□□□□ -0.18
ACACA-229	ENST00000613776	ALDH1A1	P00352	501 aa		13.95	□□□□□ -0.18
ACACA-229	ENST00000613776	HLF	Q16534	295 aa		13.95	□□□□□ -0.18
ACACA-229	ENST00000613776	SLC9C1	Q4G0N8	1177 aa		13.95	□□□□□ -0.18
ACACA-229	ENST00000613776	TTLL12	Q14166	644 aa	Predicted RBP	13.94	□□□□□ -0.18
ACACA-229	ENST00000613776	ANGEL2	Q5VTE6	544 aa	Known RBP	13.94	□□□□□ -0.18
ACACA-229	ENST00000613776	NBPF11	Q86T75	865 aa		13.94	□□□□□ -0.18
ACACA-229	ENST00000613776	FMNL2	Q96PY5	1086 aa		13.94	□□□□□ -0.18
ACACA-229	ENST00000613776	NYX	Q9GZU5	481 aa		13.94	□□□□□ -0.18
ACACA-229	ENST00000613776	USP16	Q9Y5T5	823 aa		13.94	□□□□□ -0.18
ACACA-229	ENST00000613776	CAP1	Q01518	475 aa		13.93	□□□□□ -0.18
ACACA-229	ENST00000613776	C3orf67	Q6ZVT6	689 aa		13.93	□□□□□ -0.18
ACACA-229	ENST00000613776	SCAF8	Q9UPN6	1271 aa	Known RBP	13.93	□□□□□ -0.18
ACACA-229	ENST00000613776	LAMA3	Q16787	3333 aa		13.92	□□□□□ -0.18
ACACA-229	ENST00000613776	PRAMEF18	Q5VWM3	479 aa		13.92	□□□□□ -0.18
ACACA-229	ENST00000613776	MTMR10	Q9NXD2	777 aa		13.92	□□□□□ -0.18
ACACA-229	ENST00000613776	NR2E3	Q9Y5X4	410 aa		13.92	□□□□□ -0.18
ACACA-229	ENST00000613776	RPS12	P25398	132 aa	Known RBP	13.91	□□□□□ -0.18
ACACA-229	ENST00000613776	PLA2G5	P39877	138 aa		13.91	□□□□□ -0.18
ACACA-229	ENST00000613776	GPR153	Q6NV75	609 aa		13.91	□□□□□ -0.18
ACACA-229	ENST00000613776	PTCH2	Q9Y6C5	1203 aa		13.91	□□□□□ -0.18
ACACA-229	ENST00000613776	ZBTB7B	O15156	539 aa	Predicted RBP	13.9	□□□□□ -0.18
ACACA-229	ENST00000613776	RGL2	O15211	777 aa		13.9	□□□□□ -0.18
ACACA-229	ENST00000613776	SCARF1	Q14162	830 aa		13.9	□□□□□ -0.18
ACACA-229	ENST00000613776	MTHFSD	Q2M296	383 aa	Known RBP	13.9	□□□□□ -0.18
ACACA-229	ENST00000613776	IFNL1	Q8IU54	200 aa		13.9	□□□□□ -0.18
ACACA-229	ENST00000613776	DBNDD1	Q9H9R9	158 aa		13.9	□□□□□ -0.18
ACACA-229	ENST00000613776	KCNQ5	Q9NR82	932 aa		13.9	□□□□□ -0.18
ACACA-229	ENST00000613776	STAP2	Q9UGK3	403 aa		13.9	□□□□□ -0.18
ACACA-229	ENST00000613776	TEF	Q10587	303 aa		13.89	□□□□□ -0.19
ACACA-229	ENST00000613776	TCIRG1	Q13488	830 aa		13.89	□□□□□ -0.19
ACACA-229	ENST00000613776	SPRYD7	Q5W111	196 aa		13.89	□□□□□ -0.19
ACACA-229	ENST00000613776	HTATIP2	Q9BUP3	242 aa		13.89	□□□□□ -0.19
ACACA-229	ENST00000613776	VCAN	P13611	3396 aa		13.89	□□□□□ -0.19
ACACA-229	ENST00000613776	KCNQ3	O43525	872 aa		13.88	□□□□□ -0.19
ACACA-229	ENST00000613776	SP3	Q02447	781 aa		13.88	□□□□□ -0.19
ACACA-229	ENST00000613776	PTPN12	Q05209	780 aa	Known RBP	13.88	□□□□□ -0.19
ACACA-229	ENST00000613776	SP8	Q8IXZ3	490 aa		13.88	□□□□□ -0.19
ACACA-229	ENST00000613776	SHISA4	Q96DD7	197 aa		13.88	□□□□□ -0.19
ACACA-229	ENST00000613776	FAM122A	Q96E09	287 aa		13.88	□□□□□ -0.19
ACACA-229	ENST00000613776	ABCC4	O15439	1325 aa		13.88	□□□□□ -0.19
ACACA-229	ENST00000613776	LAMB4	A4D0S4	1761 aa		13.87	□□□□□ -0.19
ACACA-229	ENST00000613776	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
ACACA-229	ENST00000613776	IL13	P35225	146 aa		13.87	□□□□□ -0.19
ACACA-229	ENST00000613776	SH3TC2	Q8TF17	1288 aa		13.87	□□□□□ -0.19
ACACA-229	ENST00000613776	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.87	□□□□□ -0.19
ACACA-229	ENST00000613776	MANSC4	A6NHS7	340 aa	Predicted RBP	13.86	□□□□□ -0.19
ACACA-229	ENST00000613776	NBPF26	B4DH59	902 aa		13.86	□□□□□ -0.19
ACACA-229	ENST00000613776	HMOX1	P09601	288 aa		13.86	□□□□□ -0.19
ACACA-229	ENST00000613776	GPT	P24298	496 aa		13.86	□□□□□ -0.19
ACACA-229	ENST00000613776	CRHR2	Q13324	411 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms