RNA–Protein interactions for RNA: ENST00000613723.4

TMC4-207, Transcript of transmembrane channel like 4, humanhuman

TSL 1 (best)

Gene TMC4, Length 1,560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-207ENST00000613723 USP44Q9H0E7 712 aa25.73■■□□□ 1.71
TMC4-207ENST00000613723 HOXA10P31260 410 aaPredicted RBP25.72■■□□□ 1.71
TMC4-207ENST00000613723 CTSWP56202 376 aa25.72■■□□□ 1.71
TMC4-207ENST00000613723 TMEM57Q8N5G2 664 aa25.72■■□□□ 1.71
TMC4-207ENST00000613723 UTYO14607 1347 aa25.71■■□□□ 1.71
TMC4-207ENST00000613723 MS4A1P11836 297 aa25.71■■□□□ 1.71
TMC4-207ENST00000613723 YBX3P16989 372 aaKnown RBP eCLIP25.71■■□□□ 1.71
TMC4-207ENST00000613723 CCDC152Q4G0S7 254 aa25.71■■□□□ 1.71
TMC4-207ENST00000613723 DDX46Q7L014 1031 aaKnown RBP25.71■■□□□ 1.71
TMC4-207ENST00000613723 CCDC85AQ96PX6 553 aaPredicted RBP25.71■■□□□ 1.71
TMC4-207ENST00000613723 PLA2G12BQ9BX93 195 aa25.71■■□□□ 1.71
TMC4-207ENST00000613723 RLBP1P12271 317 aa25.7■■□□□ 1.71
TMC4-207ENST00000613723 PRPF40BQ6NWY9 871 aaKnown RBP25.7■■□□□ 1.71
TMC4-207ENST00000613723 CRAMP1Q96RY5 1269 aa25.69■■□□□ 1.7
TMC4-207ENST00000613723 TTLL11Q8NHH1 800 aa25.69■■□□□ 1.7
TMC4-207ENST00000613723 PANK1Q8TE04 598 aa25.69■■□□□ 1.7
TMC4-207ENST00000613723 ITPRIPQ8IWB1 547 aa25.68■■□□□ 1.7
TMC4-207ENST00000613723 SPEF2Q9C093 1822 aa25.68■■□□□ 1.7
TMC4-207ENST00000613723 UBTFL1P0CB47 393 aaPredicted RBP25.67■■□□□ 1.7
TMC4-207ENST00000613723 SUCLG2Q96I99 432 aa25.67■■□□□ 1.7
TMC4-207ENST00000613723 ZNF219Q9P2Y4 722 aaPredicted RBP25.67■■□□□ 1.7
TMC4-207ENST00000613723 FOXO4P98177 505 aa25.66■■□□□ 1.7
TMC4-207ENST00000613723 MEIS3Q99687 375 aa25.66■■□□□ 1.7
TMC4-207ENST00000613723 EPHA10Q5JZY3 1008 aa25.65■■□□□ 1.7
TMC4-207ENST00000613723 GREM2Q9H772 168 aa25.65■■□□□ 1.7
TMC4-207ENST00000613723 CHMP3Q9Y3E7 222 aa25.65■■□□□ 1.7
TMC4-207ENST00000613723 C21orf2O43822 256 aa25.65■■□□□ 1.7
TMC4-207ENST00000613723 GRIN3BO60391 1043 aa25.65■■□□□ 1.7
TMC4-207ENST00000613723 GRAPQ13588 217 aa25.65■■□□□ 1.7
TMC4-207ENST00000613723 GRAPLQ8TC17 118 aaPredicted RBP25.65■■□□□ 1.7
TMC4-207ENST00000613723 KAZALD1Q96I82 304 aa25.65■■□□□ 1.7
TMC4-207ENST00000613723 SEC31BQ9NQW1 1179 aa25.65■■□□□ 1.7
TMC4-207ENST00000613723 CSF1RP07333 972 aa25.64■■□□□ 1.69
TMC4-207ENST00000613723 GNAI3P08754 354 aa25.64■■□□□ 1.69
TMC4-207ENST00000613723 LMBR1LQ6UX01 489 aa25.64■■□□□ 1.69
TMC4-207ENST00000613723 BICC1Q9H694 974 aaKnown RBP25.64■■□□□ 1.69
TMC4-207ENST00000613723 PPEF1O14829 653 aaPredicted RBP25.63■■□□□ 1.69
TMC4-207ENST00000613723 FAM161AQ3B820 660 aa25.63■■□□□ 1.69
TMC4-207ENST00000613723 CELF1Q92879 486 aaKnown RBP25.63■■□□□ 1.69
TMC4-207ENST00000613723 HDAC5Q9UQL6 1122 aa25.63■■□□□ 1.69
TMC4-207ENST00000613723 COL4A1P02462 1669 aa25.63■■□□□ 1.69
TMC4-207ENST00000613723 BBOX1O75936 387 aa25.62■■□□□ 1.69
TMC4-207ENST00000613723 RRP1P56182 461 aaKnown RBP25.62■■□□□ 1.69
TMC4-207ENST00000613723 PDE3AQ14432 1141 aa25.62■■□□□ 1.69
TMC4-207ENST00000613723 RTL9Q8NET4 1388 aa25.62■■□□□ 1.69
TMC4-207ENST00000613723 FER1L6Q2WGJ9 1857 aa25.62■■□□□ 1.69
TMC4-207ENST00000613723 ITGA6P23229 1130 aa25.61■■□□□ 1.69
TMC4-207ENST00000613723 C20orf194Q5TEA3 1177 aa25.61■■□□□ 1.69
TMC4-207ENST00000613723 RPS8P62241 208 aaKnown RBP25.61■■□□□ 1.69
TMC4-207ENST00000613723 CDC5LQ99459 802 aaKnown RBP25.61■■□□□ 1.69
TMC4-207ENST00000613723 COG6Q9Y2V7 657 aa25.61■■□□□ 1.69
TMC4-207ENST00000613723 LRRFIP2Q9Y608 721 aaKnown RBP25.61■■□□□ 1.69
TMC4-207ENST00000613723 CCDC88AQ3V6T2 1871 aa25.6■■□□□ 1.69
TMC4-207ENST00000613723 MVPQ14764 893 aaKnown RBP25.6■■□□□ 1.69
TMC4-207ENST00000613723 CHD4Q14839 1912 aa25.6■■□□□ 1.69
TMC4-207ENST00000613723 SOGA3Q5TF21 947 aa25.6■■□□□ 1.69
TMC4-207ENST00000613723 ARHGAP27Q6ZUM4 889 aa25.6■■□□□ 1.69
TMC4-207ENST00000613723 C7orf43Q8WVR3 580 aa25.6■■□□□ 1.69
TMC4-207ENST00000613723 TMX4Q9H1E5 349 aaPredicted RBP25.6■■□□□ 1.69
TMC4-207ENST00000613723 IFIT5Q13325 482 aaKnown RBP25.59■■□□□ 1.69
TMC4-207ENST00000613723 OLFM4Q6UX06 510 aa25.59■■□□□ 1.69
TMC4-207ENST00000613723 ANKRD18AQ8IVF6 992 aa25.59■■□□□ 1.69
TMC4-207ENST00000613723 ANKRD18BA2A2Z9 1011 aa25.58■■□□□ 1.69
TMC4-207ENST00000613723 CCDC57Q2TAC2 916 aa25.58■■□□□ 1.69
TMC4-207ENST00000613723 RABL6Q3YEC7 729 aaPredicted RBP25.58■■□□□ 1.69
TMC4-207ENST00000613723 ANKRD44Q8N8A2 993 aa25.58■■□□□ 1.69
TMC4-207ENST00000613723 LRRC37AA6NMS7 1700 aa25.58■■□□□ 1.69
TMC4-207ENST00000613723 ZBTB7BO15156 539 aaPredicted RBP25.57■■□□□ 1.68
TMC4-207ENST00000613723 CCDC93Q567U6 631 aa25.57■■□□□ 1.68
TMC4-207ENST00000613723 TMC4Q7Z404 712 aa25.57■■□□□ 1.68
TMC4-207ENST00000613723 DDX19BQ9UMR2 479 aa25.57■■□□□ 1.68
TMC4-207ENST00000613723 ATP6V0A2Q9Y487 856 aa25.57■■□□□ 1.68
TMC4-207ENST00000613723 GNAI2P04899 355 aa25.56■■□□□ 1.68
TMC4-207ENST00000613723 SBF1O95248 1867 aa25.56■■□□□ 1.68
TMC4-207ENST00000613723 IGHMBP2P38935 993 aaKnown RBP25.56■■□□□ 1.68
TMC4-207ENST00000613723 CC2D2BQ6DHV5 1058 aa25.56■■□□□ 1.68
TMC4-207ENST00000613723 SLC51AQ86UW1 340 aa25.56■■□□□ 1.68
TMC4-207ENST00000613723 SP8Q8IXZ3 490 aa25.56■■□□□ 1.68
TMC4-207ENST00000613723 TAF7LQ5H9L4 462 aa25.54■■□□□ 1.68
TMC4-207ENST00000613723 MPHOSPH8Q99549 860 aa25.54■■□□□ 1.68
TMC4-207ENST00000613723 SUPT16HQ9Y5B9 1047 aaKnown RBP25.54■■□□□ 1.68
TMC4-207ENST00000613723 RTKN2Q8IZC4 609 aa25.53■■□□□ 1.68
TMC4-207ENST00000613723 ZNF594Q96JF6 807 aaPredicted RBP25.52■■□□□ 1.68
TMC4-207ENST00000613723 TAOK3Q9H2K8 898 aa25.52■■□□□ 1.68
TMC4-207ENST00000613723 CHMP4BQ9H444 224 aaKnown RBP25.52■■□□□ 1.68
TMC4-207ENST00000613723 C1orf115Q9H7X2 142 aa25.52■■□□□ 1.68
TMC4-207ENST00000613723 BSDC1Q9NW68 430 aaPredicted RBP25.52■■□□□ 1.68
TMC4-207ENST00000613723 NFKBIEO00221 500 aa25.51■■□□□ 1.67
TMC4-207ENST00000613723 RASSF7Q02833 373 aa25.51■■□□□ 1.67
TMC4-207ENST00000613723 GRIPAP1Q4V328 841 aa25.51■■□□□ 1.67
TMC4-207ENST00000613723 SNED1Q8TER0 1413 aa25.5■■□□□ 1.67
TMC4-207ENST00000613723 MPNDQ8N594 471 aa25.49■■□□□ 1.67
TMC4-207ENST00000613723 NSFL1CQ9UNZ2 370 aaKnown RBP25.49■■□□□ 1.67
TMC4-207ENST00000613723 DICER1Q9UPY3 1922 aaKnown RBP25.48■■□□□ 1.67
TMC4-207ENST00000613723 DPP8Q6V1X1 898 aaPredicted RBP25.48■■□□□ 1.67
TMC4-207ENST00000613723 LDHAL6AQ6ZMR3 332 aa25.48■■□□□ 1.67
TMC4-207ENST00000613723 A0A1B0GUL6 1792 aa25.48■■□□□ 1.67
TMC4-207ENST00000613723 LTBP1Q14766 1721 aa25.48■■□□□ 1.67
TMC4-207ENST00000613723 SRGAP3O43295 1099 aa25.48■■□□□ 1.67
TMC4-207ENST00000613723 FKBP4Q02790 459 aaKnown RBP eCLIP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms