RNA–Protein interactions for RNA: ENST00000613217.4

NCAM1-220, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-220ENST00000613217 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
NCAM1-220ENST00000613217 H7C1D1 291 aa16.09■□□□□ 0.17
NCAM1-220ENST00000613217 HSPA8P11142 646 aaKnown RBP16.09■□□□□ 0.17
NCAM1-220ENST00000613217 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
NCAM1-220ENST00000613217 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
NCAM1-220ENST00000613217 GMPSP49915 693 aaPredicted RBP16.08■□□□□ 0.16
NCAM1-220ENST00000613217 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.16
NCAM1-220ENST00000613217 CDC37L1Q7L3B6 337 aa16.08■□□□□ 0.16
NCAM1-220ENST00000613217 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.16
NCAM1-220ENST00000613217 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.16
NCAM1-220ENST00000613217 PGAP2Q9UHJ9 254 aa16.08■□□□□ 0.16
NCAM1-220ENST00000613217 CHL1O00533 1208 aa16.07■□□□□ 0.16
NCAM1-220ENST00000613217 C3orf67Q6ZVT6 689 aa16.07■□□□□ 0.16
NCAM1-220ENST00000613217 EYA3Q99504 573 aa16.07■□□□□ 0.16
NCAM1-220ENST00000613217 COL4A5P29400 1685 aa16.07■□□□□ 0.16
NCAM1-220ENST00000613217 MYBBP1AQ9BQG0 1328 aaKnown RBP16.06■□□□□ 0.16
NCAM1-220ENST00000613217 CELF2O95319 508 aaKnown RBP16.06■□□□□ 0.16
NCAM1-220ENST00000613217 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
NCAM1-220ENST00000613217 PROSER3Q2NL68 480 aa16.06■□□□□ 0.16
NCAM1-220ENST00000613217 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
NCAM1-220ENST00000613217 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
NCAM1-220ENST00000613217 DPF2Q92785 391 aa16.06■□□□□ 0.16
NCAM1-220ENST00000613217 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
NCAM1-220ENST00000613217 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
NCAM1-220ENST00000613217 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
NCAM1-220ENST00000613217 RPS12P25398 132 aaKnown RBP16.05■□□□□ 0.16
NCAM1-220ENST00000613217 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
NCAM1-220ENST00000613217 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
NCAM1-220ENST00000613217 CST9Q5W186 159 aa16.05■□□□□ 0.16
NCAM1-220ENST00000613217 CYP4F22Q6NT55 531 aa16.05■□□□□ 0.16
NCAM1-220ENST00000613217 SAPCD2Q86UD0 394 aa16.05■□□□□ 0.16
NCAM1-220ENST00000613217 TRPM7Q96QT4 1865 aa16.05■□□□□ 0.16
NCAM1-220ENST00000613217 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
NCAM1-220ENST00000613217 THSD7BQ9C0I4 1608 aa16.05■□□□□ 0.16
NCAM1-220ENST00000613217 RAD17O75943 681 aa16.04■□□□□ 0.16
NCAM1-220ENST00000613217 ANXA1P04083 346 aa16.04■□□□□ 0.16
NCAM1-220ENST00000613217 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
NCAM1-220ENST00000613217 GRM1Q13255 1194 aa16.04■□□□□ 0.16
NCAM1-220ENST00000613217 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
NCAM1-220ENST00000613217 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
NCAM1-220ENST00000613217 ABHD8Q96I13 439 aa16.04■□□□□ 0.16
NCAM1-220ENST00000613217 CNOT7Q9UIV1 285 aaKnown RBP16.04■□□□□ 0.16
NCAM1-220ENST00000613217 TRAF5O00463 557 aa16.03■□□□□ 0.16
NCAM1-220ENST00000613217 NOGQ13253 232 aa16.03■□□□□ 0.16
NCAM1-220ENST00000613217 TRIM28Q13263 835 aaKnown RBP16.03■□□□□ 0.16
NCAM1-220ENST00000613217 NEUROD2Q15784 382 aa16.03■□□□□ 0.16
NCAM1-220ENST00000613217 CHPF2Q9P2E5 772 aa16.03■□□□□ 0.16
NCAM1-220ENST00000613217 LAS1LQ9Y4W2 734 aaKnown RBP16.03■□□□□ 0.16
NCAM1-220ENST00000613217 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
NCAM1-220ENST00000613217 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.16
NCAM1-220ENST00000613217 NSFL1CQ9UNZ2 370 aaKnown RBP16.02■□□□□ 0.16
NCAM1-220ENST00000613217 G3V3G9 751 aa16.01■□□□□ 0.15
NCAM1-220ENST00000613217 C6orf229H3BNL8 230 aa16.01■□□□□ 0.15
NCAM1-220ENST00000613217 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
NCAM1-220ENST00000613217 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
NCAM1-220ENST00000613217 GLIS2Q9BZE0 524 aaPredicted RBP16.01■□□□□ 0.15
NCAM1-220ENST00000613217 MICALL2Q8IY33 904 aa16■□□□□ 0.15
NCAM1-220ENST00000613217 DCPSQ96C86 337 aaKnown RBP16■□□□□ 0.15
NCAM1-220ENST00000613217 ZC3H12CQ9C0D7 883 aaKnown RBP16■□□□□ 0.15
NCAM1-220ENST00000613217 ZNF408Q9H9D4 720 aa16■□□□□ 0.15
NCAM1-220ENST00000613217 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
NCAM1-220ENST00000613217 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
NCAM1-220ENST00000613217 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
NCAM1-220ENST00000613217 C2orf69Q8N8R5 385 aa15.99■□□□□ 0.15
NCAM1-220ENST00000613217 CCDC102AQ96A19 550 aa15.99■□□□□ 0.15
NCAM1-220ENST00000613217 FAM89AQ96GI7 184 aa15.99■□□□□ 0.15
NCAM1-220ENST00000613217 FMR1Q06787 632 aaKnown RBP eCLIP15.98■□□□□ 0.15
NCAM1-220ENST00000613217 DUSP27Q5VZP5 1158 aa15.98■□□□□ 0.15
NCAM1-220ENST00000613217 KRT26Q7Z3Y9 468 aa15.98■□□□□ 0.15
NCAM1-220ENST00000613217 CCDC146Q8IYE0 955 aa15.98■□□□□ 0.15
NCAM1-220ENST00000613217 ZBTB38Q8NAP3 1195 aaPredicted RBP15.98■□□□□ 0.15
NCAM1-220ENST00000613217 TRIM35Q9UPQ4 493 aa15.98■□□□□ 0.15
NCAM1-220ENST00000613217 LAMB2P55268 1798 aa15.98■□□□□ 0.15
NCAM1-220ENST00000613217 LRRC37AA6NMS7 1700 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 YDJCA8MPS7 323 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 PSMD14O00487 310 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 AOC2O75106 756 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 DDX58O95786 925 aaKnown RBP15.97■□□□□ 0.15
NCAM1-220ENST00000613217 HUNKP57058 714 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 GNAI1P63096 354 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 CCDC152Q4G0S7 254 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
NCAM1-220ENST00000613217 TRPM4Q8TD43 1214 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 PODXL2Q9NZ53 605 aa15.97■□□□□ 0.15
NCAM1-220ENST00000613217 ATP5J2-PTCD1G3V325 749 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 ECE2O60344 883 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 HIRAP54198 1017 aaPredicted RBP15.96■□□□□ 0.15
NCAM1-220ENST00000613217 USP48Q86UV5 1035 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 SULF1Q8IWU6 871 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 CCDC191Q8NCU4 936 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 CELF1Q92879 486 aaKnown RBP15.96■□□□□ 0.15
NCAM1-220ENST00000613217 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 GBA2Q9HCG7 927 aaPredicted RBP15.96■□□□□ 0.15
NCAM1-220ENST00000613217 IFT57Q9NWB7 429 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 SAGE1Q9NXZ1 904 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
NCAM1-220ENST00000613217 CCDC85CA6NKD9 419 aa15.95■□□□□ 0.14
NCAM1-220ENST00000613217 RIMBP2O15034 1052 aa15.95■□□□□ 0.14
NCAM1-220ENST00000613217 MLLT1Q03111 559 aaPredicted RBP15.95■□□□□ 0.14
NCAM1-220ENST00000613217 SLC51AQ86UW1 340 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms