RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
TARDBP-214ENST00000613177 TRPM4Q8TD43 1214 aa8.68□□□□□ -1.02
TARDBP-214ENST00000613177 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
TARDBP-214ENST00000613177 MICAL2O94851 1124 aa8.67□□□□□ -1.02
TARDBP-214ENST00000613177 ARSDP51689 593 aa8.67□□□□□ -1.02
TARDBP-214ENST00000613177 NRG1Q02297 640 aaPredicted RBP8.67□□□□□ -1.02
TARDBP-214ENST00000613177 PCSK7Q16549 785 aa8.67□□□□□ -1.02
TARDBP-214ENST00000613177 PRSS36Q5K4E3 855 aa8.67□□□□□ -1.02
TARDBP-214ENST00000613177 DMRTC2Q8IXT2 367 aaPredicted RBP8.67□□□□□ -1.02
TARDBP-214ENST00000613177 IFT43Q96FT9 208 aa8.67□□□□□ -1.02
TARDBP-214ENST00000613177 FRRS1LQ9P0K9 344 aa8.67□□□□□ -1.02
TARDBP-214ENST00000613177 TARSP26639 723 aaKnown RBP8.66□□□□□ -1.02
TARDBP-214ENST00000613177 PLAURQ03405 335 aa8.66□□□□□ -1.02
TARDBP-214ENST00000613177 PERM1Q5SV97 790 aa8.66□□□□□ -1.02
TARDBP-214ENST00000613177 MSL1Q68DK7 614 aa8.66□□□□□ -1.02
TARDBP-214ENST00000613177 DHX32Q7L7V1 743 aaKnown RBP8.66□□□□□ -1.02
TARDBP-214ENST00000613177 SSBP4Q9BWG4 385 aaPredicted RBP8.66□□□□□ -1.02
TARDBP-214ENST00000613177 CPB1P15086 417 aa8.65□□□□□ -1.02
TARDBP-214ENST00000613177 GPLD1P80108 840 aa8.65□□□□□ -1.02
TARDBP-214ENST00000613177 C11orf91Q3C1V1 193 aa8.65□□□□□ -1.02
TARDBP-214ENST00000613177 DTWD1Q8N5C7 304 aa8.65□□□□□ -1.02
TARDBP-214ENST00000613177 LRFN2Q9ULH4 789 aa8.65□□□□□ -1.02
TARDBP-214ENST00000613177 OPLAHO14841 1288 aa8.64□□□□□ -1.03
TARDBP-214ENST00000613177 KRT25Q7Z3Z0 450 aa8.64□□□□□ -1.03
TARDBP-214ENST00000613177 TTC9Q92623 222 aa8.64□□□□□ -1.03
TARDBP-214ENST00000613177 SASH3O75995 380 aa8.63□□□□□ -1.03
TARDBP-214ENST00000613177 EGFRP00533 1210 aa8.63□□□□□ -1.03
TARDBP-214ENST00000613177 RARAP10276 462 aa8.63□□□□□ -1.03
TARDBP-214ENST00000613177 FBXO11Q86XK2 927 aa8.63□□□□□ -1.03
TARDBP-214ENST00000613177 MLLT1Q03111 559 aaPredicted RBP8.62□□□□□ -1.03
TARDBP-214ENST00000613177 FAM200AQ8TCP9 573 aa8.62□□□□□ -1.03
TARDBP-214ENST00000613177 VTI1AQ96AJ9 217 aa8.62□□□□□ -1.03
TARDBP-214ENST00000613177 RTCBQ9Y3I0 505 aaKnown RBP8.62□□□□□ -1.03
TARDBP-214ENST00000613177 NRLP54845 237 aa8.61□□□□□ -1.03
TARDBP-214ENST00000613177 ARTNQ5T4W7 220 aa8.61□□□□□ -1.03
TARDBP-214ENST00000613177 ELMSAN1Q6PJG2 1045 aa8.61□□□□□ -1.03
TARDBP-214ENST00000613177 USP21Q9UK80 565 aa8.61□□□□□ -1.03
TARDBP-214ENST00000613177 USP20Q9Y2K6 914 aa8.61□□□□□ -1.03
TARDBP-214ENST00000613177 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
TARDBP-214ENST00000613177 FKBP5Q13451 457 aaPredicted RBP8.6□□□□□ -1.03
TARDBP-214ENST00000613177 WFDC8Q8IUA0 241 aa8.6□□□□□ -1.03
TARDBP-214ENST00000613177 TLR7Q9NYK1 1049 aaKnown RBP8.6□□□□□ -1.03
TARDBP-214ENST00000613177 DEAF1O75398 565 aaPredicted RBP8.59□□□□□ -1.03
TARDBP-214ENST00000613177 COX20Q5RI15 118 aa8.59□□□□□ -1.03
TARDBP-214ENST00000613177 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
TARDBP-214ENST00000613177 TP53INP1Q96A56 240 aa8.59□□□□□ -1.03
TARDBP-214ENST00000613177 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
TARDBP-214ENST00000613177 SMG9Q9H0W8 520 aaKnown RBP8.59□□□□□ -1.03
TARDBP-214ENST00000613177 NOVA2Q9UNW9 492 aaKnown RBP8.59□□□□□ -1.03
TARDBP-214ENST00000613177 KCNMB2Q9Y691 235 aa8.59□□□□□ -1.03
TARDBP-214ENST00000613177 XYLBO75191 536 aa8.58□□□□□ -1.04
TARDBP-214ENST00000613177 HOXD8P13378 290 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-214ENST00000613177 OCLNQ16625 522 aa8.58□□□□□ -1.04
TARDBP-214ENST00000613177 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
TARDBP-214ENST00000613177 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
TARDBP-214ENST00000613177 ZFP64Q9NPA5 681 aa8.58□□□□□ -1.04
TARDBP-214ENST00000613177 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.58□□□□□ -1.04
TARDBP-214ENST00000613177 NOS3P29474 1203 aa8.57□□□□□ -1.04
TARDBP-214ENST00000613177 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
TARDBP-214ENST00000613177 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
TARDBP-214ENST00000613177 RGL4Q8IZJ4 473 aa8.57□□□□□ -1.04
TARDBP-214ENST00000613177 ZNF777Q9ULD5 760 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-214ENST00000613177 ZMIZ1Q9ULJ6 1067 aa8.57□□□□□ -1.04
TARDBP-214ENST00000613177 ACIN1Q9UKV3 1341 aaKnown RBP8.56□□□□□ -1.04
TARDBP-214ENST00000613177 DLL1O00548 723 aa8.56□□□□□ -1.04
TARDBP-214ENST00000613177 EIF2AK2P19525 551 aaKnown RBP8.56□□□□□ -1.04
TARDBP-214ENST00000613177 RFX1P22670 979 aa8.56□□□□□ -1.04
TARDBP-214ENST00000613177 ARID4AP29374 1257 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-214ENST00000613177 FAM69CQ0P6D2 419 aa8.56□□□□□ -1.04
TARDBP-214ENST00000613177 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
TARDBP-214ENST00000613177 ETFBKMTQ8IXQ9 262 aa8.56□□□□□ -1.04
TARDBP-214ENST00000613177 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
TARDBP-214ENST00000613177 MMP20O60882 483 aa8.55□□□□□ -1.04
TARDBP-214ENST00000613177 SOX18P35713 384 aa8.55□□□□□ -1.04
TARDBP-214ENST00000613177 IREB2P48200 963 aaKnown RBP8.55□□□□□ -1.04
TARDBP-214ENST00000613177 CMTR1Q8N1G2 835 aaKnown RBP8.55□□□□□ -1.04
TARDBP-214ENST00000613177 PLD4Q96BZ4 506 aa8.55□□□□□ -1.04
TARDBP-214ENST00000613177 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
TARDBP-214ENST00000613177 SAP130Q9H0E3 1048 aa8.55□□□□□ -1.04
TARDBP-214ENST00000613177 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
TARDBP-214ENST00000613177 J3QW42 95 aa8.54□□□□□ -1.04
TARDBP-214ENST00000613177 SIK1P57059 783 aa8.54□□□□□ -1.04
TARDBP-214ENST00000613177 LRP8Q14114 963 aa8.54□□□□□ -1.04
TARDBP-214ENST00000613177 ELOAQ14241 798 aaKnown RBP8.54□□□□□ -1.04
TARDBP-214ENST00000613177 FAM26DQ5JW98 314 aa8.54□□□□□ -1.04
TARDBP-214ENST00000613177 MEGF10Q96KG7 1140 aa8.54□□□□□ -1.04
TARDBP-214ENST00000613177 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.53□□□□□ -1.04
TARDBP-214ENST00000613177 PSAPP07602 524 aa8.53□□□□□ -1.04
TARDBP-214ENST00000613177 TRIP4Q15650 581 aaPredicted RBP8.53□□□□□ -1.04
TARDBP-214ENST00000613177 NSUN5Q96P11 429 aaKnown RBP8.53□□□□□ -1.04
TARDBP-214ENST00000613177 TNFRSF10BO14763 440 aa8.52□□□□□ -1.05
TARDBP-214ENST00000613177 PRMT3O60678 531 aa8.52□□□□□ -1.05
TARDBP-214ENST00000613177 SRPK2P78362 688 aaKnown RBP8.52□□□□□ -1.05
TARDBP-214ENST00000613177 STK32AQ8WU08 396 aa8.52□□□□□ -1.05
TARDBP-214ENST00000613177 COL26A1Q96A83 441 aa8.52□□□□□ -1.05
TARDBP-214ENST00000613177 C16orf46Q6P387 395 aa8.51□□□□□ -1.05
TARDBP-214ENST00000613177 DZIP1LQ8IYY4 767 aaKnown RBP8.51□□□□□ -1.05
TARDBP-214ENST00000613177 HYAL3O43820 417 aaPredicted RBP8.5□□□□□ -1.05
TARDBP-214ENST00000613177 CAPN12Q6ZSI9 719 aa8.5□□□□□ -1.05
TARDBP-214ENST00000613177 NLRP13Q86W25 1043 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms