RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 GTF2E1P29083 439 aaPredicted RBP19.93■□□□□ 0.78
CLTCL1-207ENST00000611723 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
CLTCL1-207ENST00000611723 HMMRO75330 724 aa19.92■□□□□ 0.78
CLTCL1-207ENST00000611723 IGHDP01880 384 aa19.92■□□□□ 0.78
CLTCL1-207ENST00000611723 HCLS1P14317 486 aaPredicted RBP19.92■□□□□ 0.78
CLTCL1-207ENST00000611723 PRR5LQ6MZQ0 368 aa19.92■□□□□ 0.78
CLTCL1-207ENST00000611723 LMBR1LQ6UX01 489 aa19.92■□□□□ 0.78
CLTCL1-207ENST00000611723 CNBD1Q8NA66 436 aa19.92■□□□□ 0.78
CLTCL1-207ENST00000611723 PARP3Q9Y6F1 533 aa19.92■□□□□ 0.78
CLTCL1-207ENST00000611723 PNMA6EA0A0J9YXQ4 647 aa19.91■□□□□ 0.78
CLTCL1-207ENST00000611723 SF3B3Q15393 1217 aaKnown RBP19.91■□□□□ 0.78
CLTCL1-207ENST00000611723 MSL1Q68DK7 614 aa19.91■□□□□ 0.78
CLTCL1-207ENST00000611723 B4GALNT3Q6L9W6 998 aa19.91■□□□□ 0.78
CLTCL1-207ENST00000611723 TTLL11Q8NHH1 800 aa19.91■□□□□ 0.78
CLTCL1-207ENST00000611723 RIC1Q4ADV7 1423 aa19.91■□□□□ 0.78
CLTCL1-207ENST00000611723 SRGAP3O43295 1099 aa19.9■□□□□ 0.78
CLTCL1-207ENST00000611723 CTSWP56202 376 aa19.9■□□□□ 0.78
CLTCL1-207ENST00000611723 ST5P78524 1137 aa19.89■□□□□ 0.77
CLTCL1-207ENST00000611723 ABCC12Q96J65 1359 aa19.89■□□□□ 0.77
CLTCL1-207ENST00000611723 NLRP3Q96P20 1036 aa19.89■□□□□ 0.77
CLTCL1-207ENST00000611723 DCTPP1Q9H773 170 aa19.89■□□□□ 0.77
CLTCL1-207ENST00000611723 NRXN2Q9P2S2 1712 aa19.89■□□□□ 0.77
CLTCL1-207ENST00000611723 RTL9Q8NET4 1388 aa19.88■□□□□ 0.77
CLTCL1-207ENST00000611723 KDM2BQ8NHM5 1336 aa19.88■□□□□ 0.77
CLTCL1-207ENST00000611723 RFX5P48382 616 aaPredicted RBP19.88■□□□□ 0.77
CLTCL1-207ENST00000611723 DDX60Q8IY21 1712 aaKnown RBP19.88■□□□□ 0.77
CLTCL1-207ENST00000611723 KLRG2A4D1S0 409 aaPredicted RBP19.87■□□□□ 0.77
CLTCL1-207ENST00000611723 CCDC152Q4G0S7 254 aa19.87■□□□□ 0.77
CLTCL1-207ENST00000611723 CENPQQ7L2Z9 268 aaPredicted RBP19.87■□□□□ 0.77
CLTCL1-207ENST00000611723 NOP58Q9Y2X3 529 aaKnown RBP19.87■□□□□ 0.77
CLTCL1-207ENST00000611723 LAMB2P55268 1798 aa19.87■□□□□ 0.77
CLTCL1-207ENST00000611723 MYH3P11055 1940 aa19.86■□□□□ 0.77
CLTCL1-207ENST00000611723 NPHP1O15259 732 aa19.86■□□□□ 0.77
CLTCL1-207ENST00000611723 SMC5Q8IY18 1101 aa19.86■□□□□ 0.77
CLTCL1-207ENST00000611723 GCC1Q96CN9 775 aa19.86■□□□□ 0.77
CLTCL1-207ENST00000611723 BRIP1Q9BX63 1249 aa19.86■□□□□ 0.77
CLTCL1-207ENST00000611723 COPRSQ9NQ92 184 aa19.86■□□□□ 0.77
CLTCL1-207ENST00000611723 PTPN12Q05209 780 aaKnown RBP19.85■□□□□ 0.77
CLTCL1-207ENST00000611723 CCDC57Q2TAC2 916 aa19.85■□□□□ 0.77
CLTCL1-207ENST00000611723 C3orf67Q6ZVT6 689 aa19.85■□□□□ 0.77
CLTCL1-207ENST00000611723 CCDC24Q8N4L8 307 aa19.85■□□□□ 0.77
CLTCL1-207ENST00000611723 GREM2Q9H772 168 aa19.85■□□□□ 0.77
CLTCL1-207ENST00000611723 IFIT5Q13325 482 aaKnown RBP19.84■□□□□ 0.77
CLTCL1-207ENST00000611723 FAM161AQ3B820 660 aa19.84■□□□□ 0.77
CLTCL1-207ENST00000611723 CRY2Q49AN0 593 aa19.84■□□□□ 0.77
CLTCL1-207ENST00000611723 CHMP3Q9Y3E7 222 aa19.84■□□□□ 0.77
CLTCL1-207ENST00000611723 ANKRD18BA2A2Z9 1011 aa19.83■□□□□ 0.77
CLTCL1-207ENST00000611723 ITGA6P23229 1130 aa19.83■□□□□ 0.77
CLTCL1-207ENST00000611723 FBXO3Q9UK99 471 aa19.83■□□□□ 0.77
CLTCL1-207ENST00000611723 HSP90AB4PQ58FF6 505 aa19.82■□□□□ 0.76
CLTCL1-207ENST00000611723 RAB11FIP3O75154 756 aa19.81■□□□□ 0.76
CLTCL1-207ENST00000611723 SURF6O75683 361 aaKnown RBP19.81■□□□□ 0.76
CLTCL1-207ENST00000611723 PDE6BP35913 854 aa19.81■□□□□ 0.76
CLTCL1-207ENST00000611723 CCDC85AQ96PX6 553 aaPredicted RBP19.81■□□□□ 0.76
CLTCL1-207ENST00000611723 PDZRN3Q9UPQ7 1066 aa19.81■□□□□ 0.76
CLTCL1-207ENST00000611723 PA2G4Q9UQ80 394 aaKnown RBP19.81■□□□□ 0.76
CLTCL1-207ENST00000611723 GRIN3BO60391 1043 aa19.8■□□□□ 0.76
CLTCL1-207ENST00000611723 HOXA10P31260 410 aaPredicted RBP19.8■□□□□ 0.76
CLTCL1-207ENST00000611723 CIAO1O76071 339 aa19.79■□□□□ 0.76
CLTCL1-207ENST00000611723 G3BP1Q13283 466 aaKnown RBP eCLIP19.79■□□□□ 0.76
CLTCL1-207ENST00000611723 KLHDC4Q8TBB5 520 aa19.79■□□□□ 0.76
CLTCL1-207ENST00000611723 ZNF526Q8TF50 670 aaPredicted RBP19.79■□□□□ 0.76
CLTCL1-207ENST00000611723 CDC5LQ99459 802 aaKnown RBP19.79■□□□□ 0.76
CLTCL1-207ENST00000611723 SEC31BQ9NQW1 1179 aa19.79■□□□□ 0.76
CLTCL1-207ENST00000611723 EYA2O00167 538 aa19.78■□□□□ 0.76
CLTCL1-207ENST00000611723 DDX46Q7L014 1031 aaKnown RBP19.78■□□□□ 0.76
CLTCL1-207ENST00000611723 ERC1Q8IUD2 1116 aa19.78■□□□□ 0.76
CLTCL1-207ENST00000611723 ZNF594Q96JF6 807 aaPredicted RBP19.78■□□□□ 0.76
CLTCL1-207ENST00000611723 WWC3Q9ULE0 1092 aa19.78■□□□□ 0.76
CLTCL1-207ENST00000611723 EXOC6BQ9Y2D4 811 aa19.78■□□□□ 0.76
CLTCL1-207ENST00000611723 TNRC6CQ9HCJ0 1690 aaKnown RBP19.78■□□□□ 0.76
CLTCL1-207ENST00000611723 ANKRD31Q8N7Z5 1873 aa19.77■□□□□ 0.76
CLTCL1-207ENST00000611723 SRGNP10124 158 aa19.77■□□□□ 0.76
CLTCL1-207ENST00000611723 TAF7LQ5H9L4 462 aa19.77■□□□□ 0.76
CLTCL1-207ENST00000611723 RBM17Q96I25 401 aaKnown RBP19.77■□□□□ 0.76
CLTCL1-207ENST00000611723 CRAMP1Q96RY5 1269 aa19.77■□□□□ 0.76
CLTCL1-207ENST00000611723 RIPOR2Q9Y4F9 1068 aa19.77■□□□□ 0.76
CLTCL1-207ENST00000611723 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
CLTCL1-207ENST00000611723 NPR1P16066 1061 aa19.76■□□□□ 0.75
CLTCL1-207ENST00000611723 IGHMBP2P38935 993 aaKnown RBP19.76■□□□□ 0.75
CLTCL1-207ENST00000611723 IL15P40933 162 aaPredicted RBP19.76■□□□□ 0.75
CLTCL1-207ENST00000611723 RPS8P62241 208 aaKnown RBP19.76■□□□□ 0.75
CLTCL1-207ENST00000611723 NUCB1Q02818 461 aa19.76■□□□□ 0.75
CLTCL1-207ENST00000611723 ATG9AQ7Z3C6 839 aa19.76■□□□□ 0.75
CLTCL1-207ENST00000611723 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
CLTCL1-207ENST00000611723 GOLGB1Q14789 3259 aaKnown RBP19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 GRAPQ13588 217 aa19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 LRRC24Q50LG9 513 aa19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 ANKRD45Q5TZF3 282 aa19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 LDHAL6AQ6ZMR3 332 aa19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 ANKRD18AQ8IVF6 992 aa19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 GRAPLQ8TC17 118 aaPredicted RBP19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 RHPN1Q8TCX5 695 aa19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 KIF1BPQ96EK5 621 aa19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 PUS3Q9BZE2 481 aaKnown RBP19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 BSDC1Q9NW68 430 aaPredicted RBP19.75■□□□□ 0.75
CLTCL1-207ENST00000611723 BBOX1O75936 387 aa19.74■□□□□ 0.75
CLTCL1-207ENST00000611723 SASH1O94885 1247 aa19.74■□□□□ 0.75
CLTCL1-207ENST00000611723 C2CD5Q86YS7 1000 aa19.74■□□□□ 0.75
CLTCL1-207ENST00000611723 CELF1Q92879 486 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms