RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 KIF13BQ9NQT8 1826 aa19.5■□□□□ 0.71
GRIA3-205ENST00000611689 DDX60Q8IY21 1712 aaKnown RBP19.5■□□□□ 0.71
GRIA3-205ENST00000611689 GNAI2P04899 355 aa19.49■□□□□ 0.71
GRIA3-205ENST00000611689 NPR1P16066 1061 aa19.49■□□□□ 0.71
GRIA3-205ENST00000611689 HOXA10P31260 410 aaPredicted RBP19.49■□□□□ 0.71
GRIA3-205ENST00000611689 CCDC152Q4G0S7 254 aa19.49■□□□□ 0.71
GRIA3-205ENST00000611689 LMBR1LQ6UX01 489 aa19.49■□□□□ 0.71
GRIA3-205ENST00000611689 ANKRD44Q8N8A2 993 aa19.49■□□□□ 0.71
GRIA3-205ENST00000611689 MASTLQ96GX5 879 aa19.49■□□□□ 0.71
GRIA3-205ENST00000611689 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
GRIA3-205ENST00000611689 ZBTB40Q9NUA8 1239 aa19.49■□□□□ 0.71
GRIA3-205ENST00000611689 RABL6Q3YEC7 729 aaPredicted RBP19.48■□□□□ 0.71
GRIA3-205ENST00000611689 STYK1Q6J9G0 422 aa19.48■□□□□ 0.71
GRIA3-205ENST00000611689 RPGRQ92834 1020 aaKnown RBP19.48■□□□□ 0.71
GRIA3-205ENST00000611689 CCDC85AQ96PX6 553 aaPredicted RBP19.48■□□□□ 0.71
GRIA3-205ENST00000611689 ZNF622Q969S3 477 aaKnown RBP eCLIP19.47■□□□□ 0.71
GRIA3-205ENST00000611689 RBM17Q96I25 401 aaKnown RBP19.47■□□□□ 0.71
GRIA3-205ENST00000611689 GREM2Q9H772 168 aa19.47■□□□□ 0.71
GRIA3-205ENST00000611689 LAMB2P55268 1798 aa19.47■□□□□ 0.71
GRIA3-205ENST00000611689 DDX46Q7L014 1031 aaKnown RBP19.46■□□□□ 0.71
GRIA3-205ENST00000611689 CRAMP1Q96RY5 1269 aa19.46■□□□□ 0.71
GRIA3-205ENST00000611689 C1orf115Q9H7X2 142 aa19.46■□□□□ 0.71
GRIA3-205ENST00000611689 RTL9Q8NET4 1388 aa19.45■□□□□ 0.7
GRIA3-205ENST00000611689 KIAA1551Q9HCM1 1747 aa19.45■□□□□ 0.7
GRIA3-205ENST00000611689 ALDH1B1P30837 517 aa19.45■□□□□ 0.7
GRIA3-205ENST00000611689 IRX6P78412 446 aaPredicted RBP19.45■□□□□ 0.7
GRIA3-205ENST00000611689 FAM161AQ3B820 660 aa19.45■□□□□ 0.7
GRIA3-205ENST00000611689 SEC31BQ9NQW1 1179 aa19.45■□□□□ 0.7
GRIA3-205ENST00000611689 PIM2Q9P1W9 311 aa19.45■□□□□ 0.7
GRIA3-205ENST00000611689 CHMP3Q9Y3E7 222 aa19.45■□□□□ 0.7
GRIA3-205ENST00000611689 EXOC6Q8TAG9 804 aa19.44■□□□□ 0.7
GRIA3-205ENST00000611689 CNKSR1Q969H4 720 aa19.44■□□□□ 0.7
GRIA3-205ENST00000611689 COL11A2P13942 1736 aaPredicted RBP19.43■□□□□ 0.7
GRIA3-205ENST00000611689 ITGA6P23229 1130 aa19.43■□□□□ 0.7
GRIA3-205ENST00000611689 MTX1Q13505 466 aa19.43■□□□□ 0.7
GRIA3-205ENST00000611689 TTLL6Q8N841 843 aa19.43■□□□□ 0.7
GRIA3-205ENST00000611689 ANKRD18BA2A2Z9 1011 aa19.42■□□□□ 0.7
GRIA3-205ENST00000611689 IFIT5Q13325 482 aaKnown RBP19.42■□□□□ 0.7
GRIA3-205ENST00000611689 GRAPQ13588 217 aa19.42■□□□□ 0.7
GRIA3-205ENST00000611689 GRAPLQ8TC17 118 aaPredicted RBP19.42■□□□□ 0.7
GRIA3-205ENST00000611689 CELF1Q92879 486 aaKnown RBP19.42■□□□□ 0.7
GRIA3-205ENST00000611689 BBOX1O75936 387 aa19.41■□□□□ 0.7
GRIA3-205ENST00000611689 RPS8P62241 208 aaKnown RBP19.41■□□□□ 0.7
GRIA3-205ENST00000611689 ATP8B2P98198 1209 aa19.41■□□□□ 0.7
GRIA3-205ENST00000611689 CCDC57Q2TAC2 916 aa19.41■□□□□ 0.7
GRIA3-205ENST00000611689 DALRD3Q5D0E6 543 aaKnown RBP19.41■□□□□ 0.7
GRIA3-205ENST00000611689 PRPF40BQ6NWY9 871 aaKnown RBP19.4■□□□□ 0.7
GRIA3-205ENST00000611689 CEP85Q6P2H3 762 aa19.4■□□□□ 0.7
GRIA3-205ENST00000611689 CDC5LQ99459 802 aaKnown RBP19.4■□□□□ 0.7
GRIA3-205ENST00000611689 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
GRIA3-205ENST00000611689 PNMA6EA0A0J9YXQ4 647 aa19.39■□□□□ 0.69
GRIA3-205ENST00000611689 SRGAP3O43295 1099 aa19.39■□□□□ 0.69
GRIA3-205ENST00000611689 RFX5P48382 616 aaPredicted RBP19.39■□□□□ 0.69
GRIA3-205ENST00000611689 ANKRD18AQ8IVF6 992 aa19.39■□□□□ 0.69
GRIA3-205ENST00000611689 RPAP2Q8IXW5 612 aaPredicted RBP19.39■□□□□ 0.69
GRIA3-205ENST00000611689 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.69
GRIA3-205ENST00000611689 SRCAPQ6ZRS2 3230 aa19.39■□□□□ 0.69
GRIA3-205ENST00000611689 MYH3P11055 1940 aa19.39■□□□□ 0.69
GRIA3-205ENST00000611689 PPEF1O14829 653 aaPredicted RBP19.38■□□□□ 0.69
GRIA3-205ENST00000611689 COL4A1P02462 1669 aa19.38■□□□□ 0.69
GRIA3-205ENST00000611689 AAMPQ13685 434 aa19.38■□□□□ 0.69
GRIA3-205ENST00000611689 C7orf43Q8WVR3 580 aa19.38■□□□□ 0.69
GRIA3-205ENST00000611689 DLEC1Q9Y238 1755 aa19.38■□□□□ 0.69
GRIA3-205ENST00000611689 BCS1LQ9Y276 419 aa19.38■□□□□ 0.69
GRIA3-205ENST00000611689 IGHMBP2P38935 993 aaKnown RBP19.37■□□□□ 0.69
GRIA3-205ENST00000611689 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
GRIA3-205ENST00000611689 SIRT2Q8IXJ6 389 aa19.37■□□□□ 0.69
GRIA3-205ENST00000611689 SSH3Q8TE77 659 aa19.37■□□□□ 0.69
GRIA3-205ENST00000611689 PTPN12Q05209 780 aaKnown RBP19.36■□□□□ 0.69
GRIA3-205ENST00000611689 POLA2Q14181 598 aa19.36■□□□□ 0.69
GRIA3-205ENST00000611689 TMC4Q7Z404 712 aa19.36■□□□□ 0.69
GRIA3-205ENST00000611689 SP8Q8IXZ3 490 aa19.36■□□□□ 0.69
GRIA3-205ENST00000611689 KLHDC4Q8TBB5 520 aa19.36■□□□□ 0.69
GRIA3-205ENST00000611689 BSDC1Q9NW68 430 aaPredicted RBP19.36■□□□□ 0.69
GRIA3-205ENST00000611689 ATP6V0A2Q9Y487 856 aa19.36■□□□□ 0.69
GRIA3-205ENST00000611689 PCDHB15Q9Y5E8 787 aa19.36■□□□□ 0.69
GRIA3-205ENST00000611689 C21orf2O43822 256 aa19.35■□□□□ 0.69
GRIA3-205ENST00000611689 SLC51AQ86UW1 340 aa19.35■□□□□ 0.69
GRIA3-205ENST00000611689 MPHOSPH8Q99549 860 aa19.35■□□□□ 0.69
GRIA3-205ENST00000611689 COPRSQ9NQ92 184 aa19.35■□□□□ 0.69
GRIA3-205ENST00000611689 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
GRIA3-205ENST00000611689 OLFM4Q6UX06 510 aa19.34■□□□□ 0.69
GRIA3-205ENST00000611689 LDHAL6AQ6ZMR3 332 aa19.34■□□□□ 0.69
GRIA3-205ENST00000611689 PUS3Q9BZE2 481 aaKnown RBP19.34■□□□□ 0.69
GRIA3-205ENST00000611689 PA2G4Q9UQ80 394 aaKnown RBP19.34■□□□□ 0.69
GRIA3-205ENST00000611689 SLX4Q8IY92 1834 aa19.34■□□□□ 0.69
GRIA3-205ENST00000611689 TAF1P21675 1872 aa19.33■□□□□ 0.69
GRIA3-205ENST00000611689 BRCA1P38398 1863 aaKnown RBP19.33■□□□□ 0.69
GRIA3-205ENST00000611689 YBX3P16989 372 aaKnown RBP eCLIP19.33■□□□□ 0.68
GRIA3-205ENST00000611689 PELP1Q8IZL8 1130 aaKnown RBP19.33■□□□□ 0.68
GRIA3-205ENST00000611689 EYA2O00167 538 aa19.32■□□□□ 0.68
GRIA3-205ENST00000611689 HMMRO75330 724 aa19.32■□□□□ 0.68
GRIA3-205ENST00000611689 NEFLP07196 543 aa19.32■□□□□ 0.68
GRIA3-205ENST00000611689 CC2D2BQ6DHV5 1058 aa19.32■□□□□ 0.68
GRIA3-205ENST00000611689 CNNM1Q9NRU3 951 aa19.32■□□□□ 0.68
GRIA3-205ENST00000611689 MINPP1Q9UNW1 487 aa19.32■□□□□ 0.68
GRIA3-205ENST00000611689 RIPOR2Q9Y4F9 1068 aa19.32■□□□□ 0.68
GRIA3-205ENST00000611689 LRRC24Q50LG9 513 aa19.31■□□□□ 0.68
GRIA3-205ENST00000611689 SOGA3Q5TF21 947 aa19.31■□□□□ 0.68
GRIA3-205ENST00000611689 SIL1Q9H173 461 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms