RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 LRRC59Q96AG4 307 aaKnown RBP17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 SNRKQ9NRH2 765 aa17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 EID1Q9Y6B2 187 aa17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 MED23Q9ULK4 1368 aa17.89■□□□□ 0.45
PCDHGB1-202ENST00000611598 HIP1O00291 1037 aa17.89■□□□□ 0.45
PCDHGB1-202ENST00000611598 CACTINQ8WUQ7 758 aaKnown RBP17.89■□□□□ 0.45
PCDHGB1-202ENST00000611598 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
PCDHGB1-202ENST00000611598 ANKRD1Q15327 319 aa17.88■□□□□ 0.45
PCDHGB1-202ENST00000611598 RNF20Q5VTR2 975 aa17.88■□□□□ 0.45
PCDHGB1-202ENST00000611598 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
PCDHGB1-202ENST00000611598 GRM8O00222 908 aa17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 TNNT1P13805 278 aa17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 CLIP2Q9UDT6 1046 aa17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 ADGRL3Q9HAR2 1447 aa17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 GIGYF1O75420 1035 aaPredicted RBP17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 CHGBP05060 677 aa17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 IP6K1Q92551 441 aa17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 BRF1Q92994 677 aa17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 COL15A1P39059 1388 aa17.87■□□□□ 0.45
PCDHGB1-202ENST00000611598 PDIA4P13667 645 aaKnown RBP17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 AIMP1Q12904 312 aaKnown RBP17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 RESTQ13127 1097 aa17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 TBX22Q9Y458 520 aa17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 NDUFB9Q9Y6M9 179 aa17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 IGSF3O75054 1194 aa17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 ARID5BQ14865 1188 aa17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 TAF5LO75529 589 aa17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 CEBPZQ03701 1054 aaKnown RBP17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 AKAP4Q5JQC9 854 aa17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 GTF3C6Q969F1 213 aa17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 ALDH8A1Q9H2A2 487 aaPredicted RBP17.86■□□□□ 0.45
PCDHGB1-202ENST00000611598 LTN1O94822 1766 aa17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 SMTNL1A8MU46 457 aa17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 GTPBP4Q9BZE4 634 aaKnown RBP17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 PXDNQ92626 1479 aa17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 A0A087WWV3 80 aa17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 C11orf57Q6ZUT1 292 aaPredicted RBP17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
PCDHGB1-202ENST00000611598 JCADQ9P266 1359 aa17.84■□□□□ 0.45
PCDHGB1-202ENST00000611598 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
PCDHGB1-202ENST00000611598 KCNA6P17658 529 aa17.84■□□□□ 0.45
PCDHGB1-202ENST00000611598 FOSBP53539 338 aa17.84■□□□□ 0.45
PCDHGB1-202ENST00000611598 LRRC2Q9BYS8 371 aa17.84■□□□□ 0.45
PCDHGB1-202ENST00000611598 FTOQ9C0B1 505 aaKnown RBP eCLIP17.84■□□□□ 0.45
PCDHGB1-202ENST00000611598 TPD52L1Q16890 204 aaPredicted RBP17.84■□□□□ 0.45
PCDHGB1-202ENST00000611598 CCDC129Q6ZRS4 1044 aa17.84■□□□□ 0.45
PCDHGB1-202ENST00000611598 USP27XA6NNY8 438 aa17.83■□□□□ 0.44
PCDHGB1-202ENST00000611598 TSGA10IPQ3SY00 556 aa17.83■□□□□ 0.44
PCDHGB1-202ENST00000611598 HMG20BQ9P0W2 317 aa17.83■□□□□ 0.44
PCDHGB1-202ENST00000611598 RGPD2P0DJD1 1756 aa17.83■□□□□ 0.44
PCDHGB1-202ENST00000611598 ANKARQ7Z5J8 1434 aa17.83■□□□□ 0.44
PCDHGB1-202ENST00000611598 IQCB1Q15051 598 aa17.83■□□□□ 0.44
PCDHGB1-202ENST00000611598 Q6ZUG5 572 aa17.83■□□□□ 0.44
PCDHGB1-202ENST00000611598 IGKV5-2P06315 115 aa17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 ZNF592Q92610 1267 aa17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 SEC62Q99442 399 aaKnown RBP17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 UTYO14607 1347 aa17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 USP54Q70EL1 1684 aa17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 H3BQV1 296 aa17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 HSP90B1P14625 803 aaKnown RBP17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 IFFO2Q5TF58 517 aa17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 NEK1Q96PY6 1258 aa17.82■□□□□ 0.44
PCDHGB1-202ENST00000611598 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
PCDHGB1-202ENST00000611598 CCDC112Q8NEF3 446 aa17.81■□□□□ 0.44
PCDHGB1-202ENST00000611598 CTNNA3Q9UI47 895 aa17.81■□□□□ 0.44
PCDHGB1-202ENST00000611598 HDAC5Q9UQL6 1122 aa17.81■□□□□ 0.44
PCDHGB1-202ENST00000611598 LMO7Q8WWI1 1683 aa17.81■□□□□ 0.44
PCDHGB1-202ENST00000611598 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
PCDHGB1-202ENST00000611598 LRRC8AQ8IWT6 810 aa17.81■□□□□ 0.44
PCDHGB1-202ENST00000611598 GOLPH3LQ9H4A5 285 aa17.81■□□□□ 0.44
PCDHGB1-202ENST00000611598 SLIT1O75093 1534 aa17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 HEG1Q9ULI3 1381 aa17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 SCRN1Q12765 414 aa17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 NFAT5O94916 1531 aa17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 CDC25BP30305 580 aa17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 ADD1P35611 737 aaKnown RBP17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 CEP135Q66GS9 1140 aa17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 DBNLQ9UJU6 430 aaKnown RBP17.8■□□□□ 0.44
PCDHGB1-202ENST00000611598 GOLGA6L19H0YKK7 550 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 CYP21A2P08686 494 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 PDIA6Q15084 440 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 SYCP1Q15431 976 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 C1orf141Q5JVX7 400 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 FEZ1Q99689 392 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 PAXBP1Q9Y5B6 917 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 ZNF609O15014 1411 aa17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 ERCC4Q92889 916 aaPredicted RBP17.79■□□□□ 0.44
PCDHGB1-202ENST00000611598 KRT32Q14532 448 aa17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 CCAR1Q8IX12 1150 aaKnown RBP17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 OGFRQ9NZT2 677 aa17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 PHF8Q9UPP1 1060 aa17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 SARM1Q6SZW1 724 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms