RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CIAO1O76071 339 aa12.48□□□□□ -0.41
PABPC1-224ENST00000610907 SYT1P21579 422 aa12.48□□□□□ -0.41
PABPC1-224ENST00000610907 PIP4K2AP48426 406 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-224ENST00000610907 EVA1CP58658 441 aa12.48□□□□□ -0.41
PABPC1-224ENST00000610907 TRIM28Q13263 835 aaKnown RBP12.48□□□□□ -0.41
PABPC1-224ENST00000610907 BLOC1S2Q6QNY1 142 aa12.48□□□□□ -0.41
PABPC1-224ENST00000610907 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-224ENST00000610907 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
PABPC1-224ENST00000610907 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
PABPC1-224ENST00000610907 PDCP20941 246 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 CLCN1P35523 988 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 FOXD4L5Q5VV16 416 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-224ENST00000610907 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 FOXD4L4Q8WXT5 416 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-224ENST00000610907 TMEM63CQ9P1W3 806 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 LETM1O95202 739 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-224ENST00000610907 F13A1P00488 732 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 A1BGP04217 495 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 RPS6KB1P23443 525 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 MCMDC2Q4G0Z9 681 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 HS1BP3Q53T59 392 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 USP48Q86UV5 1035 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.47□□□□□ -0.41
PABPC1-224ENST00000610907 ISCA1Q9BUE6 129 aa12.47□□□□□ -0.41
PABPC1-224ENST00000610907 RRAGDQ9NQL2 400 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-224ENST00000610907 PALLDQ8WX93 1383 aa12.46□□□□□ -0.41
PABPC1-224ENST00000610907 EYA2O00167 538 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 GJB2P29033 226 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.42
PABPC1-224ENST00000610907 ATG9AQ7Z3C6 839 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 CCDC83Q8IWF9 413 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 KBTBD3Q8NAB2 608 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.42
PABPC1-224ENST00000610907 JARID2Q92833 1246 aaPredicted RBP12.46□□□□□ -0.42
PABPC1-224ENST00000610907 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 TMOD3Q9NYL9 352 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 SHANK3Q9BYB0 1731 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 SH3TC1Q8TE82 1336 aa12.46□□□□□ -0.42
PABPC1-224ENST00000610907 ESPNB1AK53 854 aa12.45□□□□□ -0.42
PABPC1-224ENST00000610907 CPA1P15085 419 aa12.45□□□□□ -0.42
PABPC1-224ENST00000610907 UBE2HP62256 183 aa12.45□□□□□ -0.42
PABPC1-224ENST00000610907 TCIRG1Q13488 830 aa12.45□□□□□ -0.42
PABPC1-224ENST00000610907 ME3Q16798 604 aa12.45□□□□□ -0.42
PABPC1-224ENST00000610907 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
PABPC1-224ENST00000610907 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
PABPC1-224ENST00000610907 LARGE1O95461 756 aa12.44□□□□□ -0.42
PABPC1-224ENST00000610907 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
PABPC1-224ENST00000610907 LRRFIP1Q32MZ4 808 aaKnown RBP12.44□□□□□ -0.42
PABPC1-224ENST00000610907 ZNF589Q86UQ0 364 aaPredicted RBP12.44□□□□□ -0.42
PABPC1-224ENST00000610907 PLA2G12BQ9BX93 195 aa12.44□□□□□ -0.42
PABPC1-224ENST00000610907 RBSNQ9H1K0 784 aa12.44□□□□□ -0.42
PABPC1-224ENST00000610907 TPCN1Q9ULQ1 816 aa12.44□□□□□ -0.42
PABPC1-224ENST00000610907 NSFL1CQ9UNZ2 370 aaKnown RBP12.44□□□□□ -0.42
PABPC1-224ENST00000610907 MTMR6Q9Y217 621 aa12.44□□□□□ -0.42
PABPC1-224ENST00000610907 TJP1Q07157 1748 aa12.44□□□□□ -0.42
PABPC1-224ENST00000610907 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
PABPC1-224ENST00000610907 SYCE3A1L190 88 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 STARD3NLO95772 234 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 CHAMP1Q96JM3 812 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 PDLIM2Q96JY6 352 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 STRN4Q9NRL3 753 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 ZNF335Q9H4Z2 1342 aaPredicted RBP12.43□□□□□ -0.42
PABPC1-224ENST00000610907 PCCAP05165 728 aaPredicted RBP12.43□□□□□ -0.42
PABPC1-224ENST00000610907 KIF6Q6ZMV9 814 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 FAM184AQ8NB25 1140 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 CHMP4CQ96CF2 233 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 NEUROD6Q96NK8 337 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 NEK1Q96PY6 1258 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 DNAJC2Q99543 621 aaKnown RBP12.43□□□□□ -0.42
PABPC1-224ENST00000610907 DSCC1Q9BVC3 393 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 TSPY26PQ9H489 355 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 PAG1Q9NWQ8 432 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 CEP126Q9P2H0 1117 aa12.43□□□□□ -0.42
PABPC1-224ENST00000610907 ZNF609O15014 1411 aa12.42□□□□□ -0.42
PABPC1-224ENST00000610907 ST3GAL1Q11201 340 aa12.42□□□□□ -0.42
PABPC1-224ENST00000610907 TOB2Q14106 344 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-224ENST00000610907 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
PABPC1-224ENST00000610907 HSP90AB3PQ58FF7 597 aa12.42□□□□□ -0.42
PABPC1-224ENST00000610907 CCDC183Q5T5S1 534 aa12.42□□□□□ -0.42
PABPC1-224ENST00000610907 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
PABPC1-224ENST00000610907 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-224ENST00000610907 EDC3Q96F86 508 aaKnown RBP12.42□□□□□ -0.42
PABPC1-224ENST00000610907 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
PABPC1-224ENST00000610907 GADD45BO75293 160 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-224ENST00000610907 CSF1RP07333 972 aa12.41□□□□□ -0.42
PABPC1-224ENST00000610907 UVSSAQ2YD98 709 aa12.41□□□□□ -0.42
PABPC1-224ENST00000610907 ZMYM1Q5SVZ6 1142 aa12.41□□□□□ -0.42
PABPC1-224ENST00000610907 ZBTB38Q8NAP3 1195 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-224ENST00000610907 CNPY2Q9Y2B0 182 aa12.41□□□□□ -0.42
PABPC1-224ENST00000610907 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
PABPC1-224ENST00000610907 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
PABPC1-224ENST00000610907 TIMM10P62072 90 aa12.4□□□□□ -0.42
PABPC1-224ENST00000610907 DDX46Q7L014 1031 aaKnown RBP12.4□□□□□ -0.42
PABPC1-224ENST00000610907 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
PABPC1-224ENST00000610907 PIGBQ92521 554 aa12.4□□□□□ -0.42
PABPC1-224ENST00000610907 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms