RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 ROBO1Q9Y6N7 1651 aa21.2■□□□□ 0.98
TNIP1-221ENST00000610874 A0A0G2JS52 829 aa21.2■□□□□ 0.98
TNIP1-221ENST00000610874 LARGE1O95461 756 aa21.2■□□□□ 0.98
TNIP1-221ENST00000610874 F13A1P00488 732 aa21.2■□□□□ 0.98
TNIP1-221ENST00000610874 SYTL4Q96C24 671 aaPredicted RBP21.2■□□□□ 0.98
TNIP1-221ENST00000610874 MTX1Q13505 466 aa21.19■□□□□ 0.98
TNIP1-221ENST00000610874 CCDC83Q8IWF9 413 aa21.19■□□□□ 0.98
TNIP1-221ENST00000610874 PIGBQ92521 554 aa21.19■□□□□ 0.98
TNIP1-221ENST00000610874 GIMAP6Q6P9H5 292 aa21.19■□□□□ 0.98
TNIP1-221ENST00000610874 PIBF1Q8WXW3 757 aa21.18■□□□□ 0.98
TNIP1-221ENST00000610874 A0A087WZG4 1122 aa21.18■□□□□ 0.98
TNIP1-221ENST00000610874 NOLC1Q14978 699 aaKnown RBP eCLIP21.18■□□□□ 0.98
TNIP1-221ENST00000610874 LETM1O95202 739 aaPredicted RBP21.17■□□□□ 0.98
TNIP1-221ENST00000610874 GJB2P29033 226 aa21.17■□□□□ 0.98
TNIP1-221ENST00000610874 DNM1Q05193 864 aaKnown RBP21.17■□□□□ 0.98
TNIP1-221ENST00000610874 DIAPH3Q9NSV4 1193 aa21.17■□□□□ 0.98
TNIP1-221ENST00000610874 ATP6V1DQ9Y5K8 247 aa21.17■□□□□ 0.98
TNIP1-221ENST00000610874 UTYO14607 1347 aa21.16■□□□□ 0.98
TNIP1-221ENST00000610874 TSC1Q92574 1164 aa21.16■□□□□ 0.98
TNIP1-221ENST00000610874 CLASRPQ8N2M8 674 aaKnown RBP21.16■□□□□ 0.98
TNIP1-221ENST00000610874 JAKMIP1Q96N16 626 aaKnown RBP21.16■□□□□ 0.98
TNIP1-221ENST00000610874 SASH1O94885 1247 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 HSP90AB4PQ58FF6 505 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 AACSQ86V21 672 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 PLBD2Q8NHP8 589 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 CCDC8Q9H0W5 538 aaPredicted RBP21.15■□□□□ 0.98
TNIP1-221ENST00000610874 GLI3P10071 1580 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 SHANK3Q9BYB0 1731 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 KDM4AO75164 1064 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 ADCK5Q3MIX3 580 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 PRPF40BQ6NWY9 871 aaKnown RBP21.15■□□□□ 0.98
TNIP1-221ENST00000610874 MTERF4Q7Z6M4 381 aaKnown RBP21.15■□□□□ 0.98
TNIP1-221ENST00000610874 MYRIPQ8NFW9 859 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 PLEKHG2Q9H7P9 1386 aa21.15■□□□□ 0.98
TNIP1-221ENST00000610874 VPS37CA5D8V6 355 aaPredicted RBP21.14■□□□□ 0.98
TNIP1-221ENST00000610874 PTH1RQ03431 593 aa21.14■□□□□ 0.98
TNIP1-221ENST00000610874 G3BP1Q13283 466 aaKnown RBP eCLIP21.14■□□□□ 0.98
TNIP1-221ENST00000610874 DNAJC10Q8IXB1 793 aa21.14■□□□□ 0.98
TNIP1-221ENST00000610874 PDRG1Q9NUG6 133 aa21.14■□□□□ 0.97
TNIP1-221ENST00000610874 CHMP3Q9Y3E7 222 aa21.14■□□□□ 0.97
TNIP1-221ENST00000610874 IFIT2P09913 472 aaKnown RBP21.13■□□□□ 0.97
TNIP1-221ENST00000610874 TLR7Q9NYK1 1049 aaKnown RBP21.13■□□□□ 0.97
TNIP1-221ENST00000610874 KCPQ6ZWJ8 1503 aa21.13■□□□□ 0.97
TNIP1-221ENST00000610874 HDAC5Q9UQL6 1122 aa21.13■□□□□ 0.97
TNIP1-221ENST00000610874 MTMR6Q9Y217 621 aa21.13■□□□□ 0.97
TNIP1-221ENST00000610874 GLRX3O76003 335 aaKnown RBP21.12■□□□□ 0.97
TNIP1-221ENST00000610874 EAF2Q96CJ1 260 aaPredicted RBP21.12■□□□□ 0.97
TNIP1-221ENST00000610874 ATG3Q9NT62 314 aa21.12■□□□□ 0.97
TNIP1-221ENST00000610874 EXOC5O00471 708 aa21.11■□□□□ 0.97
TNIP1-221ENST00000610874 NECAB1Q8N987 351 aa21.11■□□□□ 0.97
TNIP1-221ENST00000610874 RUFY2Q8WXA3 655 aa21.11■□□□□ 0.97
TNIP1-221ENST00000610874 FUCA2Q9BTY2 467 aa21.11■□□□□ 0.97
TNIP1-221ENST00000610874 CCDC9Q9Y3X0 531 aaKnown RBP21.1■□□□□ 0.97
TNIP1-221ENST00000610874 TOGARAM1Q9Y4F4 1720 aa21.1■□□□□ 0.97
TNIP1-221ENST00000610874 FAM177BA6PVY3 158 aa21.1■□□□□ 0.97
TNIP1-221ENST00000610874 AP5Z1O43299 807 aa21.1■□□□□ 0.97
TNIP1-221ENST00000610874 SPC24Q8NBT2 197 aa21.1■□□□□ 0.97
TNIP1-221ENST00000610874 PRIMPOLQ96LW4 560 aa21.1■□□□□ 0.97
TNIP1-221ENST00000610874 CYP46A1Q9Y6A2 500 aa21.1■□□□□ 0.97
TNIP1-221ENST00000610874 VPS53Q5VIR6 699 aa21.09■□□□□ 0.97
TNIP1-221ENST00000610874 LMBR1LQ6UX01 489 aa21.09■□□□□ 0.97
TNIP1-221ENST00000610874 TTC41PQ6P2S7 1318 aa21.09■□□□□ 0.97
TNIP1-221ENST00000610874 ME3Q16798 604 aa21.08■□□□□ 0.97
TNIP1-221ENST00000610874 KCNJ4P48050 445 aa21.08■□□□□ 0.97
TNIP1-221ENST00000610874 HMGN5P82970 282 aaKnown RBP21.08■□□□□ 0.97
TNIP1-221ENST00000610874 ST3GAL1Q11201 340 aa21.08■□□□□ 0.97
TNIP1-221ENST00000610874 ERC1Q8IUD2 1116 aa21.08■□□□□ 0.97
TNIP1-221ENST00000610874 ECHDC1Q9NTX5 307 aa21.08■□□□□ 0.97
TNIP1-221ENST00000610874 FERMT3Q86UX7 667 aa21.08■□□□□ 0.96
TNIP1-221ENST00000610874 ACSBG1Q96GR2 724 aa21.08■□□□□ 0.96
TNIP1-221ENST00000610874 SLC4A9Q96Q91 983 aa21.07■□□□□ 0.96
TNIP1-221ENST00000610874 ZSWIM6Q9HCJ5 1215 aa21.07■□□□□ 0.96
TNIP1-221ENST00000610874 ARFGEF2Q9Y6D5 1785 aa21.07■□□□□ 0.96
TNIP1-221ENST00000610874 AFDNP55196 1824 aaKnown RBP21.07■□□□□ 0.96
TNIP1-221ENST00000610874 CASP7P55210 303 aa21.07■□□□□ 0.96
TNIP1-221ENST00000610874 PTPN12Q05209 780 aaKnown RBP21.07■□□□□ 0.96
TNIP1-221ENST00000610874 ZSCAN31Q96LW9 406 aaPredicted RBP21.07■□□□□ 0.96
TNIP1-221ENST00000610874 CCDC85AQ96PX6 553 aaPredicted RBP21.07■□□□□ 0.96
TNIP1-221ENST00000610874 SH2B1Q9NRF2 756 aaPredicted RBP21.07■□□□□ 0.96
TNIP1-221ENST00000610874 CWC25Q9NXE8 425 aaPredicted RBP21.07■□□□□ 0.96
TNIP1-221ENST00000610874 FAM173BQ6P4H8 233 aa21.06■□□□□ 0.96
TNIP1-221ENST00000610874 SPTLC3Q9NUV7 552 aa21.06■□□□□ 0.96
TNIP1-221ENST00000610874 NDUFB9Q9Y6M9 179 aa21.06■□□□□ 0.96
TNIP1-221ENST00000610874 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
TNIP1-221ENST00000610874 ZKSCAN1P17029 563 aaPredicted RBP21.06■□□□□ 0.96
TNIP1-221ENST00000610874 COL16A1Q07092 1604 aaPredicted RBP21.06■□□□□ 0.96
TNIP1-221ENST00000610874 TNS2Q63HR2 1409 aa21.06■□□□□ 0.96
TNIP1-221ENST00000610874 LTBP4Q8N2S1 1624 aa21.06■□□□□ 0.96
TNIP1-221ENST00000610874 BOLA2Q9H3K6 86 aa21.06■□□□□ 0.96
TNIP1-221ENST00000610874 UBR2Q8IWV8 1755 aa21.05■□□□□ 0.96
TNIP1-221ENST00000610874 CCDC192P0DO97 292 aa21.05■□□□□ 0.96
TNIP1-221ENST00000610874 RFX5P48382 616 aaPredicted RBP21.05■□□□□ 0.96
TNIP1-221ENST00000610874 TFCP2Q12800 502 aa21.05■□□□□ 0.96
TNIP1-221ENST00000610874 CAMK4Q16566 473 aa21.05■□□□□ 0.96
TNIP1-221ENST00000610874 LARP1BQ659C4 914 aaKnown RBP21.05■□□□□ 0.96
TNIP1-221ENST00000610874 KCNF1Q9H3M0 494 aa21.05■□□□□ 0.96
TNIP1-221ENST00000610874 PRDM10Q9NQV6 1147 aa21.05■□□□□ 0.96
TNIP1-221ENST00000610874 PYCARDQ9ULZ3 195 aa21.05■□□□□ 0.96
TNIP1-221ENST00000610874 ZNF710Q8N1W2 664 aa21.05■□□□□ 0.96
TNIP1-221ENST00000610874 GPATCH3Q96I76 525 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms