RNA–Protein interactions for RNA: ENST00000610023.1

PDE4C-217, Transcript of phosphodiesterase 4C, humanhuman

TSL 4

Gene PDE4C, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-217ENST00000610023 CDHR2Q9BYE9 1310 aa27.21■■□□□ 1.95
PDE4C-217ENST00000610023 NEURL1BA8MQ27 555 aa27.21■■□□□ 1.95
PDE4C-217ENST00000610023 BBOX1O75936 387 aa27.21■■□□□ 1.95
PDE4C-217ENST00000610023 IARSP41252 1262 aaKnown RBP27.21■■□□□ 1.95
PDE4C-217ENST00000610023 SLFN5Q08AF3 891 aa27.21■■□□□ 1.95
PDE4C-217ENST00000610023 CWF19L2Q2TBE0 894 aaKnown RBP27.21■■□□□ 1.95
PDE4C-217ENST00000610023 DPY19L2Q6NUT2 758 aa27.2■■□□□ 1.94
PDE4C-217ENST00000610023 TMC4Q7Z404 712 aa27.2■■□□□ 1.94
PDE4C-217ENST00000610023 PDE8AO60658 829 aa27.19■■□□□ 1.94
PDE4C-217ENST00000610023 COL4A1P02462 1669 aa27.19■■□□□ 1.94
PDE4C-217ENST00000610023 JARID2Q92833 1246 aaPredicted RBP27.18■■□□□ 1.94
PDE4C-217ENST00000610023 SP8Q8IXZ3 490 aa27.17■■□□□ 1.94
PDE4C-217ENST00000610023 LINS1Q8NG48 757 aa27.17■■□□□ 1.94
PDE4C-217ENST00000610023 CDCA7LQ96GN5 454 aa27.17■■□□□ 1.94
PDE4C-217ENST00000610023 RRAGCQ9HB90 399 aa27.17■■□□□ 1.94
PDE4C-217ENST00000610023 CCDC152Q4G0S7 254 aa27.16■■□□□ 1.94
PDE4C-217ENST00000610023 C16orf71Q8IYS4 520 aaPredicted RBP27.16■■□□□ 1.94
PDE4C-217ENST00000610023 CELF1Q92879 486 aaKnown RBP27.16■■□□□ 1.94
PDE4C-217ENST00000610023 COL4A5P29400 1685 aa27.15■■□□□ 1.94
PDE4C-217ENST00000610023 DUOX1Q9NRD9 1551 aa27.15■■□□□ 1.94
PDE4C-217ENST00000610023 DPP8Q6V1X1 898 aaPredicted RBP27.15■■□□□ 1.94
PDE4C-217ENST00000610023 F6X3S4 739 aa27.14■■□□□ 1.94
PDE4C-217ENST00000610023 TOMM70O94826 608 aa27.14■■□□□ 1.94
PDE4C-217ENST00000610023 CTSWP56202 376 aa27.14■■□□□ 1.94
PDE4C-217ENST00000610023 GCKRQ14397 625 aa27.14■■□□□ 1.94
PDE4C-217ENST00000610023 UBE3BQ7Z3V4 1068 aa27.14■■□□□ 1.94
PDE4C-217ENST00000610023 SUPT20HQ8NEM7 779 aa27.14■■□□□ 1.94
PDE4C-217ENST00000610023 JDP2Q8WYK2 163 aa27.14■■□□□ 1.94
PDE4C-217ENST00000610023 LARGE2Q8N3Y3 721 aa27.13■■□□□ 1.93
PDE4C-217ENST00000610023 MPNDQ8N594 471 aa27.13■■□□□ 1.93
PDE4C-217ENST00000610023 ZNF541Q9H0D2 1346 aa27.13■■□□□ 1.93
PDE4C-217ENST00000610023 VEGFAP15692 232 aaPredicted RBP27.12■■□□□ 1.93
PDE4C-217ENST00000610023 RTFDC1Q9BY42 306 aaPredicted RBP27.12■■□□□ 1.93
PDE4C-217ENST00000610023 LTBP1Q14766 1721 aa27.11■■□□□ 1.93
PDE4C-217ENST00000610023 H7C1W4 665 aa27.11■■□□□ 1.93
PDE4C-217ENST00000610023 PPIP5K2O43314 1243 aa27.11■■□□□ 1.93
PDE4C-217ENST00000610023 DDNO94850 711 aaPredicted RBP27.11■■□□□ 1.93
PDE4C-217ENST00000610023 TRMT2AQ8IZ69 625 aaKnown RBP27.11■■□□□ 1.93
PDE4C-217ENST00000610023 SEC31BQ9NQW1 1179 aa27.11■■□□□ 1.93
PDE4C-217ENST00000610023 FZD9O00144 591 aa27.1■■□□□ 1.93
PDE4C-217ENST00000610023 RPS8P62241 208 aaKnown RBP27.1■■□□□ 1.93
PDE4C-217ENST00000610023 AOC3Q16853 763 aa27.1■■□□□ 1.93
PDE4C-217ENST00000610023 BEND3Q5T5X7 828 aa27.1■■□□□ 1.93
PDE4C-217ENST00000610023 RBM46Q8TBY0 533 aaKnown RBP27.1■■□□□ 1.93
PDE4C-217ENST00000610023 CCDC85AQ96PX6 553 aaPredicted RBP27.1■■□□□ 1.93
PDE4C-217ENST00000610023 VPS33BQ9H267 617 aa27.1■■□□□ 1.93
PDE4C-217ENST00000610023 SPEF2Q9C093 1822 aa27.09■■□□□ 1.93
PDE4C-217ENST00000610023 MRPL50Q8N5N7 158 aaKnown RBP27.09■■□□□ 1.93
PDE4C-217ENST00000610023 SCN4AP35499 1836 aa27.09■■□□□ 1.93
PDE4C-217ENST00000610023 NIM1KQ8IY84 436 aa27.08■■□□□ 1.93
PDE4C-217ENST00000610023 RTL9Q8NET4 1388 aa27.08■■□□□ 1.93
PDE4C-217ENST00000610023 CASP7P55210 303 aa27.07■■□□□ 1.92
PDE4C-217ENST00000610023 EIF6P56537 245 aaKnown RBP27.07■■□□□ 1.92
PDE4C-217ENST00000610023 TTLL11Q8NHH1 800 aa27.07■■□□□ 1.92
PDE4C-217ENST00000610023 SSH1Q8WYL5 1049 aa27.07■■□□□ 1.92
PDE4C-217ENST00000610023 L3MBTL3Q96JM7 780 aaPredicted RBP27.07■■□□□ 1.92
PDE4C-217ENST00000610023 CDC5LQ99459 802 aaKnown RBP27.07■■□□□ 1.92
PDE4C-217ENST00000610023 POTECB2RU33 542 aa27.06■■□□□ 1.92
PDE4C-217ENST00000610023 CT47B1P0C2W7 299 aaPredicted RBP27.06■■□□□ 1.92
PDE4C-217ENST00000610023 ALDH1L2Q3SY69 923 aa27.06■■□□□ 1.92
PDE4C-217ENST00000610023 SLC4A10Q6U841 1118 aa27.06■■□□□ 1.92
PDE4C-217ENST00000610023 ANKRD18AQ8IVF6 992 aa27.06■■□□□ 1.92
PDE4C-217ENST00000610023 PLA2G12BQ9BX93 195 aa27.06■■□□□ 1.92
PDE4C-217ENST00000610023 BCL2L13Q9BXK5 485 aa27.06■■□□□ 1.92
PDE4C-217ENST00000610023 PTPRCP08575 1304 aa27.06■■□□□ 1.92
PDE4C-217ENST00000610023 KIAA2012Q0VF49 1180 aa27.05■■□□□ 1.92
PDE4C-217ENST00000610023 IQCA1LA6NCM1 817 aa27.04■■□□□ 1.92
PDE4C-217ENST00000610023 GREM2Q9H772 168 aa27.04■■□□□ 1.92
PDE4C-217ENST00000610023 SMC4Q9NTJ3 1288 aa27.04■■□□□ 1.92
PDE4C-217ENST00000610023 NSFL1CQ9UNZ2 370 aaKnown RBP27.04■■□□□ 1.92
PDE4C-217ENST00000610023 ALDH1L1O75891 902 aa27.03■■□□□ 1.92
PDE4C-217ENST00000610023 GPSM2P81274 684 aa27.03■■□□□ 1.92
PDE4C-217ENST00000610023 GPC2Q8N158 579 aa27.03■■□□□ 1.92
PDE4C-217ENST00000610023 SRCIN1Q9C0H9 1055 aa27.03■■□□□ 1.92
PDE4C-217ENST00000610023 HSPA6P17066 643 aa27.02■■□□□ 1.92
PDE4C-217ENST00000610023 HNRNPUQ00839 825 aaKnown RBP eCLIP27.02■■□□□ 1.92
PDE4C-217ENST00000610023 FSTL1Q12841 308 aa27.02■■□□□ 1.92
PDE4C-217ENST00000610023 GRM8O00222 908 aa27.01■■□□□ 1.91
PDE4C-217ENST00000610023 SMC1BQ8NDV3 1235 aa27.01■■□□□ 1.91
PDE4C-217ENST00000610023 C6orf229H3BNL8 230 aa27■■□□□ 1.91
PDE4C-217ENST00000610023 FAM161AQ3B820 660 aa27■■□□□ 1.91
PDE4C-217ENST00000610023 EYA3Q99504 573 aa27■■□□□ 1.91
PDE4C-217ENST00000610023 PODXL2Q9NZ53 605 aa27■■□□□ 1.91
PDE4C-217ENST00000610023 GJA3Q9Y6H8 435 aa27■■□□□ 1.91
PDE4C-217ENST00000610023 C9orf78Q9NZ63 289 aaPredicted RBP26.99■■□□□ 1.91
PDE4C-217ENST00000610023 ANKIB1Q9P2G1 1089 aa26.99■■□□□ 1.91
PDE4C-217ENST00000610023 POLLQ9UGP5 575 aa26.99■■□□□ 1.91
PDE4C-217ENST00000610023 ZNRF3Q9ULT6 936 aa26.99■■□□□ 1.91
PDE4C-217ENST00000610023 CSF1RP07333 972 aa26.98■■□□□ 1.91
PDE4C-217ENST00000610023 ITGA6P23229 1130 aa26.98■■□□□ 1.91
PDE4C-217ENST00000610023 WASHC4Q2M389 1173 aa26.98■■□□□ 1.91
PDE4C-217ENST00000610023 HACL1Q9UJ83 578 aa26.98■■□□□ 1.91
PDE4C-217ENST00000610023 XDHP47989 1333 aa26.97■■□□□ 1.91
PDE4C-217ENST00000610023 UFL1O94874 794 aa26.97■■□□□ 1.91
PDE4C-217ENST00000610023 IGHMBP2P38935 993 aaKnown RBP26.97■■□□□ 1.91
PDE4C-217ENST00000610023 TBC1D16Q8TBP0 767 aa26.97■■□□□ 1.91
PDE4C-217ENST00000610023 TAF1DQ9H5J8 278 aaPredicted RBP26.97■■□□□ 1.91
PDE4C-217ENST00000610023 BSDC1Q9NW68 430 aaPredicted RBP26.97■■□□□ 1.91
PDE4C-217ENST00000610023 GGA1Q9UJY5 639 aa26.97■■□□□ 1.91
PDE4C-217ENST00000610023 ADAMTSL1Q8N6G6 1762 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms