RNA–Protein interactions for RNA: ENST00000609429.5

LINC00635-222, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 743 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-222	ENST00000609429	GTF2E1	P29083	439 aa	Predicted RBP	11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	PTGER2	P43116	358 aa		11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	ATF7IP	Q6VMQ6	1270 aa		11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	SMIM5	Q71RC9	77 aa		11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	NLRP10	Q86W26	655 aa		11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	MYD88	Q99836	296 aa		11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	UTP14A	Q9BVJ6	771 aa	Known RBP	11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	BCL2L13	Q9BXK5	485 aa		11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	SRCIN1	Q9C0H9	1055 aa		11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	CD2AP	Q9Y5K6	639 aa		11.35	□□□□□ -0.59
LINC00635-222	ENST00000609429	DDR1	Q08345	913 aa		11.34	□□□□□ -0.59
LINC00635-222	ENST00000609429	FTSJ3	Q8IY81	847 aa	Known RBP	11.34	□□□□□ -0.59
LINC00635-222	ENST00000609429	CHMP4B	Q9H444	224 aa	Known RBP	11.34	□□□□□ -0.59
LINC00635-222	ENST00000609429	NOB1	Q9ULX3	412 aa	Known RBP	11.34	□□□□□ -0.59
LINC00635-222	ENST00000609429	ABCC4	O15439	1325 aa		11.34	□□□□□ -0.59
LINC00635-222	ENST00000609429	UBN2	Q6ZU65	1347 aa		11.34	□□□□□ -0.59
LINC00635-222	ENST00000609429	SH3TC1	Q8TE82	1336 aa		11.34	□□□□□ -0.59
LINC00635-222	ENST00000609429	CDHR2	Q9BYE9	1310 aa		11.34	□□□□□ -0.59
LINC00635-222	ENST00000609429	DLEC1	Q9Y238	1755 aa		11.33	□□□□□ -0.59
LINC00635-222	ENST00000609429	POTEB3	A0JP26	581 aa		11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	NEURL1B	A8MQ27	555 aa		11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	NTSR2	O95665	410 aa		11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	PCCA	P05165	728 aa	Predicted RBP	11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	GPT	P24298	496 aa		11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	PDE6B	P35913	854 aa		11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	POTEB	Q6S5H4	581 aa		11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	BICDL1	Q6ZP65	573 aa		11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	PDCD7	Q8N8D1	485 aa	Known RBP	11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	FRAT1	Q92837	279 aa	Predicted RBP	11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	TRMT112	Q9UI30	125 aa	Known RBP	11.33	□□□□□ -0.6
LINC00635-222	ENST00000609429	BCAR3	O75815	825 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	PYGB	P11216	843 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	TGFB2	P61812	414 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	BEND3	Q5T5X7	828 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	PRR5L	Q6MZQ0	368 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	SLC4A10	Q6U841	1118 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	BRIP1	Q9BX63	1249 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	KRTAP3-3	Q9BYR6	98 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	KRTAP3-2	Q9BYR7	98 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	PCDHB8	Q9UN66	801 aa		11.32	□□□□□ -0.6
LINC00635-222	ENST00000609429	MYH3	P11055	1940 aa		11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	IGKV5-2	P06315	115 aa		11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	CENPB	P07199	599 aa	Predicted RBP	11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	TRIM27	P14373	513 aa		11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	GCKR	Q14397	625 aa		11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	PDE3A	Q14432	1141 aa		11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	INTS3	Q68E01	1043 aa	Known RBP	11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	DZIP1L	Q8IYY4	767 aa	Known RBP	11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	DDX60	Q8IY21	1712 aa	Known RBP	11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	ANKRD31	Q8N7Z5	1873 aa		11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429	SRCAP	Q6ZRS2	3230 aa		11.31	□□□□□ -0.6
LINC00635-222	ENST00000609429		F6X3S4	739 aa		11.3	□□□□□ -0.6
LINC00635-222	ENST00000609429	ATP5J2-PTCD1	G3V325	749 aa		11.3	□□□□□ -0.6
LINC00635-222	ENST00000609429	GRM8	O00222	908 aa		11.3	□□□□□ -0.6
LINC00635-222	ENST00000609429	SLC10A5	Q5PT55	438 aa		11.3	□□□□□ -0.6
LINC00635-222	ENST00000609429	SUSD4	Q5VX71	490 aa		11.3	□□□□□ -0.6
LINC00635-222	ENST00000609429	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.3	□□□□□ -0.6
LINC00635-222	ENST00000609429	KIAA1551	Q9HCM1	1747 aa		11.29	□□□□□ -0.6
LINC00635-222	ENST00000609429	GNAI3	P08754	354 aa		11.29	□□□□□ -0.6
LINC00635-222	ENST00000609429	EMP3	P54852	163 aa		11.29	□□□□□ -0.6
LINC00635-222	ENST00000609429	CWF19L2	Q2TBE0	894 aa	Known RBP	11.29	□□□□□ -0.6
LINC00635-222	ENST00000609429	NLRP3	Q96P20	1036 aa		11.29	□□□□□ -0.6
LINC00635-222	ENST00000609429	UTY	O14607	1347 aa		11.29	□□□□□ -0.6
LINC00635-222	ENST00000609429	ABCC12	Q96J65	1359 aa		11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	KLRG2	A4D1S0	409 aa	Predicted RBP	11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429		H0YIN7	160 aa		11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	PDE8A	O60658	829 aa		11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	RRP1	P56182	461 aa	Known RBP	11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	CRY2	Q49AN0	593 aa		11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	PLA2G12B	Q9BX93	195 aa		11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	COL11A2	P13942	1736 aa	Predicted RBP	11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	RTL9	Q8NET4	1388 aa		11.28	□□□□□ -0.6
LINC00635-222	ENST00000609429	BRCA1	P38398	1863 aa	Known RBP	11.27	□□□□□ -0.6
LINC00635-222	ENST00000609429	FAM177B	A6PVY3	158 aa		11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429		H7C1W4	665 aa		11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	IRS4	O14654	1257 aa	Predicted RBP	11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	NPR1	P16066	1061 aa		11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	ERFE	Q4G0M1	354 aa		11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	CCDC152	Q4G0S7	254 aa		11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	STYK1	Q6J9G0	422 aa		11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	TMC4	Q7Z404	712 aa		11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	RPGR	Q92834	1020 aa	Known RBP	11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	DDX19B	Q9UMR2	479 aa		11.27	□□□□□ -0.61
LINC00635-222	ENST00000609429	UBTFL1	P0CB47	393 aa	Predicted RBP	11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	ALDH1B1	P30837	517 aa		11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	AAMP	Q13685	434 aa		11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	SF3B3	Q15393	1217 aa	Known RBP	11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	DCAF8	Q5TAQ9	597 aa		11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	UBE3B	Q7Z3V4	1068 aa		11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	NUTM1	Q86Y26	1132 aa		11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	KLHL34	Q8N239	644 aa		11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	FAM89A	Q96GI7	184 aa		11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	MASTL	Q96GX5	879 aa		11.26	□□□□□ -0.61
LINC00635-222	ENST00000609429	ARFGEF1	Q9Y6D6	1849 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	SRGN	P10124	158 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	HOXA10	P31260	410 aa	Predicted RBP	11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	CTSW	P56202	376 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms