RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 CSF1RP07333 972 aa13.83□□□□□ -0.19
LINC01278-204ENST00000609143 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.19
LINC01278-204ENST00000609143 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.19
LINC01278-204ENST00000609143 TRMT112Q9UI30 125 aaKnown RBP13.83□□□□□ -0.19
LINC01278-204ENST00000609143 USP21Q9UK80 565 aa13.83□□□□□ -0.19
LINC01278-204ENST00000609143 ITPK1Q13572 414 aa13.83□□□□□ -0.2
LINC01278-204ENST00000609143 LRRC24Q50LG9 513 aa13.83□□□□□ -0.2
LINC01278-204ENST00000609143 ZNF609O15014 1411 aa13.83□□□□□ -0.2
LINC01278-204ENST00000609143 KCNQ2O43526 872 aa13.83□□□□□ -0.2
LINC01278-204ENST00000609143 ZNF34Q8IZ26 560 aa13.83□□□□□ -0.2
LINC01278-204ENST00000609143 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.2
LINC01278-204ENST00000609143 CEP126Q9P2H0 1117 aa13.83□□□□□ -0.2
LINC01278-204ENST00000609143 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
LINC01278-204ENST00000609143 RFX7Q2KHR2 1363 aa13.82□□□□□ -0.2
LINC01278-204ENST00000609143 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
LINC01278-204ENST00000609143 IRS4O14654 1257 aaPredicted RBP13.82□□□□□ -0.2
LINC01278-204ENST00000609143 NMIQ13287 307 aaPredicted RBP13.82□□□□□ -0.2
LINC01278-204ENST00000609143 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
LINC01278-204ENST00000609143 HAUS7Q99871 368 aa13.82□□□□□ -0.2
LINC01278-204ENST00000609143 MYH3P11055 1940 aa13.81□□□□□ -0.2
LINC01278-204ENST00000609143 CTSWP56202 376 aa13.81□□□□□ -0.2
LINC01278-204ENST00000609143 PUS3Q9BZE2 481 aaKnown RBP13.81□□□□□ -0.2
LINC01278-204ENST00000609143 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
LINC01278-204ENST00000609143 AKAP2Q9Y2D5 859 aa13.81□□□□□ -0.2
LINC01278-204ENST00000609143 UBN2Q6ZU65 1347 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 SYNE4Q8N205 404 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 TTLL11Q8NHH1 800 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
LINC01278-204ENST00000609143 SNRKQ9NRH2 765 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 COL5A3P25940 1745 aaPredicted RBP13.8□□□□□ -0.2
LINC01278-204ENST00000609143 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 A0A1B0GUL7 405 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 PDE8AO60658 829 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 MEX3CQ5U5Q3 659 aaKnown RBP13.8□□□□□ -0.2
LINC01278-204ENST00000609143 AK7Q96M32 723 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 THSD7AQ9UPZ6 1657 aa13.8□□□□□ -0.2
LINC01278-204ENST00000609143 TIMM10P62072 90 aa13.79□□□□□ -0.2
LINC01278-204ENST00000609143 MYH14Q7Z406 1995 aaKnown RBP13.79□□□□□ -0.2
LINC01278-204ENST00000609143 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
LINC01278-204ENST00000609143 ITGA6P23229 1130 aa13.79□□□□□ -0.2
LINC01278-204ENST00000609143 PARP10Q53GL7 1025 aa13.79□□□□□ -0.2
LINC01278-204ENST00000609143 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
LINC01278-204ENST00000609143 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 PTH1RQ03431 593 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 RAB3GAP1Q15042 981 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 EDC3Q96F86 508 aaKnown RBP13.78□□□□□ -0.2
LINC01278-204ENST00000609143 GREM2Q9H772 168 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 MED23Q9ULK4 1368 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 SH3TC1Q8TE82 1336 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 KCNJ4P48050 445 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 UPF3BQ9BZI7 483 aaKnown RBP13.78□□□□□ -0.2
LINC01278-204ENST00000609143 ZNF652Q9Y2D9 606 aa13.78□□□□□ -0.2
LINC01278-204ENST00000609143 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.77□□□□□ -0.2
LINC01278-204ENST00000609143 UTP14AQ9BVJ6 771 aaKnown RBP13.77□□□□□ -0.2
LINC01278-204ENST00000609143 HSP90B1P14625 803 aaKnown RBP13.77□□□□□ -0.21
LINC01278-204ENST00000609143 MCM4P33991 863 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 GORABQ5T7V8 394 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 LDHAL6AQ6ZMR3 332 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 KBTBD3Q8NAB2 608 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 TMX3Q96JJ7 454 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 PAG1Q9NWQ8 432 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.21
LINC01278-204ENST00000609143 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.21
LINC01278-204ENST00000609143 CCDC158Q5M9N0 1113 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 SUSD4Q5VX71 490 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
LINC01278-204ENST00000609143 DDX46Q7L014 1031 aaKnown RBP13.77□□□□□ -0.21
LINC01278-204ENST00000609143 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 NDUFB9Q9Y6M9 179 aa13.77□□□□□ -0.21
LINC01278-204ENST00000609143 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 NHSQ6T4R5 1651 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 KCNB2Q92953 911 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 GBP4Q96PP9 640 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 RIPOR2Q9Y4F9 1068 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 RBM8AQ9Y5S9 174 aaKnown RBP13.76□□□□□ -0.21
LINC01278-204ENST00000609143 RIC1Q4ADV7 1423 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 NUCB2P80303 420 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 LINC00116Q8NCU8 138 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 TNPO1Q92973 898 aaKnown RBP13.76□□□□□ -0.21
LINC01278-204ENST00000609143 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.76□□□□□ -0.21
LINC01278-204ENST00000609143 BCORQ6W2J9 1755 aa13.76□□□□□ -0.21
LINC01278-204ENST00000609143 CNTNAP4Q9C0A0 1308 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 GOLIM4O00461 696 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 HSPA1LP34931 641 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 XAGE2Q96GT9 111 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 GJD4Q96KN9 370 aaPredicted RBP13.75□□□□□ -0.21
LINC01278-204ENST00000609143 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC01278-204ENST00000609143 BTAF1O14981 1849 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 ATP2B3Q16720 1220 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms