RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 H7C1D1 291 aa22.83■■□□□ 1.25
CHMP4A-211ENST00000609024 RAD17O75943 681 aa22.83■■□□□ 1.25
CHMP4A-211ENST00000609024 HSP90AB3PQ58FF7 597 aa22.83■■□□□ 1.25
CHMP4A-211ENST00000609024 SLC10A5Q5PT55 438 aa22.83■■□□□ 1.25
CHMP4A-211ENST00000609024 SLC51AQ86UW1 340 aa22.83■■□□□ 1.25
CHMP4A-211ENST00000609024 SP8Q8IXZ3 490 aa22.83■■□□□ 1.25
CHMP4A-211ENST00000609024 THUMPD2Q9BTF0 503 aaKnown RBP22.83■■□□□ 1.25
CHMP4A-211ENST00000609024 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.25
CHMP4A-211ENST00000609024 RTFDC1Q9BY42 306 aaPredicted RBP22.82■■□□□ 1.24
CHMP4A-211ENST00000609024 DLG5Q8TDM6 1919 aa22.82■■□□□ 1.24
CHMP4A-211ENST00000609024 MCOLN1Q9GZU1 580 aa22.81■■□□□ 1.24
CHMP4A-211ENST00000609024 RGS19P49795 217 aa22.8■■□□□ 1.24
CHMP4A-211ENST00000609024 KIAA2012Q0VF49 1180 aa22.8■■□□□ 1.24
CHMP4A-211ENST00000609024 CNOT7Q9UIV1 285 aaKnown RBP22.8■■□□□ 1.24
CHMP4A-211ENST00000609024 NOGQ13253 232 aa22.79■■□□□ 1.24
CHMP4A-211ENST00000609024 DGKZQ13574 1117 aa22.79■■□□□ 1.24
CHMP4A-211ENST00000609024 PGAP2Q9UHJ9 254 aa22.79■■□□□ 1.24
CHMP4A-211ENST00000609024 TRMT112Q9UI30 125 aaKnown RBP22.79■■□□□ 1.24
CHMP4A-211ENST00000609024 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
CHMP4A-211ENST00000609024 HUNKP57058 714 aa22.77■■□□□ 1.24
CHMP4A-211ENST00000609024 AIMP1Q12904 312 aaKnown RBP22.77■■□□□ 1.24
CHMP4A-211ENST00000609024 GRAPQ13588 217 aa22.77■■□□□ 1.24
CHMP4A-211ENST00000609024 TMC4Q7Z404 712 aa22.77■■□□□ 1.24
CHMP4A-211ENST00000609024 GRAPLQ8TC17 118 aaPredicted RBP22.77■■□□□ 1.24
CHMP4A-211ENST00000609024 USP48Q86UV5 1035 aa22.76■■□□□ 1.23
CHMP4A-211ENST00000609024 MICALL2Q8IY33 904 aa22.76■■□□□ 1.23
CHMP4A-211ENST00000609024 PLEKHF1Q96S99 279 aa22.76■■□□□ 1.23
CHMP4A-211ENST00000609024 SH3TC1Q8TE82 1336 aa22.76■■□□□ 1.23
CHMP4A-211ENST00000609024 ANXA1P04083 346 aa22.75■■□□□ 1.23
CHMP4A-211ENST00000609024 HIRAP54198 1017 aaPredicted RBP22.75■■□□□ 1.23
CHMP4A-211ENST00000609024 TRPM4Q8TD43 1214 aa22.75■■□□□ 1.23
CHMP4A-211ENST00000609024 COPS6Q7L5N1 327 aa22.74■■□□□ 1.23
CHMP4A-211ENST00000609024 NLRP10Q86W26 655 aa22.74■■□□□ 1.23
CHMP4A-211ENST00000609024 CASP8AP2Q9UKL3 1982 aa22.74■■□□□ 1.23
CHMP4A-211ENST00000609024 PDIA6Q15084 440 aa22.73■■□□□ 1.23
CHMP4A-211ENST00000609024 WASHC4Q2M389 1173 aa22.73■■□□□ 1.23
CHMP4A-211ENST00000609024 C2orf69Q8N8R5 385 aa22.73■■□□□ 1.23
CHMP4A-211ENST00000609024 NECTIN2Q92692 538 aa22.73■■□□□ 1.23
CHMP4A-211ENST00000609024 DCPSQ96C86 337 aaKnown RBP22.73■■□□□ 1.23
CHMP4A-211ENST00000609024 RIPK4P57078 832 aa22.72■■□□□ 1.23
CHMP4A-211ENST00000609024 LMOD3Q0VAK6 560 aa22.72■■□□□ 1.23
CHMP4A-211ENST00000609024 TCIRG1Q13488 830 aa22.72■■□□□ 1.23
CHMP4A-211ENST00000609024 PROSER3Q2NL68 480 aa22.72■■□□□ 1.23
CHMP4A-211ENST00000609024 XAGE3Q8WTP9 111 aa22.72■■□□□ 1.23
CHMP4A-211ENST00000609024 NSFL1CQ9UNZ2 370 aaKnown RBP22.72■■□□□ 1.23
CHMP4A-211ENST00000609024 ANKRD36CQ5JPF3 1778 aa22.71■■□□□ 1.23
CHMP4A-211ENST00000609024 RGMBQ6NW40 437 aa22.71■■□□□ 1.23
CHMP4A-211ENST00000609024 KRT26Q7Z3Y9 468 aa22.71■■□□□ 1.23
CHMP4A-211ENST00000609024 DPF2Q92785 391 aa22.71■■□□□ 1.23
CHMP4A-211ENST00000609024 CCDC102AQ96A19 550 aa22.71■■□□□ 1.23
CHMP4A-211ENST00000609024 BABAM1Q9NWV8 329 aa22.71■■□□□ 1.23
CHMP4A-211ENST00000609024 ZBTB12Q9Y330 459 aaPredicted RBP22.71■■□□□ 1.23
CHMP4A-211ENST00000609024 YDJCA8MPS7 323 aa22.7■■□□□ 1.22
CHMP4A-211ENST00000609024 C6orf229H3BNL8 230 aa22.7■■□□□ 1.22
CHMP4A-211ENST00000609024 TBC1D10BQ4KMP7 808 aaPredicted RBP22.7■■□□□ 1.22
CHMP4A-211ENST00000609024 SAMD7Q7Z3H4 446 aa22.7■■□□□ 1.22
CHMP4A-211ENST00000609024 LRP10Q7Z4F1 713 aa22.7■■□□□ 1.22
CHMP4A-211ENST00000609024 EYA3Q99504 573 aa22.7■■□□□ 1.22
CHMP4A-211ENST00000609024 GBA2Q9HCG7 927 aaPredicted RBP22.7■■□□□ 1.22
CHMP4A-211ENST00000609024 LAMB2P55268 1798 aa22.69■■□□□ 1.22
CHMP4A-211ENST00000609024 SHTN1A0MZ66 631 aa22.69■■□□□ 1.22
CHMP4A-211ENST00000609024 G3V3G9 751 aa22.69■■□□□ 1.22
CHMP4A-211ENST00000609024 RIMBP2O15034 1052 aa22.69■■□□□ 1.22
CHMP4A-211ENST00000609024 RBM26Q5T8P6 1007 aaKnown RBP22.69■■□□□ 1.22
CHMP4A-211ENST00000609024 DCAF8Q5TAQ9 597 aa22.69■■□□□ 1.22
CHMP4A-211ENST00000609024 DBNDD1Q9H9R9 158 aa22.69■■□□□ 1.22
CHMP4A-211ENST00000609024 PSMD14O00487 310 aa22.68■■□□□ 1.22
CHMP4A-211ENST00000609024 RPS12P25398 132 aaKnown RBP22.68■■□□□ 1.22
CHMP4A-211ENST00000609024 ZNF157P51786 506 aaPredicted RBP22.68■■□□□ 1.22
CHMP4A-211ENST00000609024 SAGE1Q9NXZ1 904 aa22.67■■□□□ 1.22
CHMP4A-211ENST00000609024 SULF1Q8IWU6 871 aa22.66■■□□□ 1.22
CHMP4A-211ENST00000609024 ZNF428Q96B54 188 aa22.66■■□□□ 1.22
CHMP4A-211ENST00000609024 ZIC5Q96T25 663 aa22.66■■□□□ 1.22
CHMP4A-211ENST00000609024 PCDH10Q9P2E7 1040 aa22.66■■□□□ 1.22
CHMP4A-211ENST00000609024 KIF23Q02241 960 aaPredicted RBP22.65■■□□□ 1.22
CHMP4A-211ENST00000609024 ECE2O60344 883 aa22.64■■□□□ 1.21
CHMP4A-211ENST00000609024 DLK2Q6UY11 383 aa22.64■■□□□ 1.21
CHMP4A-211ENST00000609024 LAS1LQ9Y4W2 734 aaKnown RBP22.64■■□□□ 1.21
CHMP4A-211ENST00000609024 ADM5C9JUS6 153 aa22.63■■□□□ 1.21
CHMP4A-211ENST00000609024 TRPA1O75762 1119 aa22.63■■□□□ 1.21
CHMP4A-211ENST00000609024 DOK7Q18PE1 504 aa22.63■■□□□ 1.21
CHMP4A-211ENST00000609024 KIF4BQ2VIQ3 1234 aa22.63■■□□□ 1.21
CHMP4A-211ENST00000609024 ZC3H12CQ9C0D7 883 aaKnown RBP22.63■■□□□ 1.21
CHMP4A-211ENST00000609024 TAF1P21675 1872 aa22.62■■□□□ 1.21
CHMP4A-211ENST00000609024 ANKRD13DQ6ZTN6 518 aa22.62■■□□□ 1.21
CHMP4A-211ENST00000609024 PLBD2Q8NHP8 589 aa22.62■■□□□ 1.21
CHMP4A-211ENST00000609024 CELF1Q92879 486 aaKnown RBP22.62■■□□□ 1.21
CHMP4A-211ENST00000609024 FAM89AQ96GI7 184 aa22.62■■□□□ 1.21
CHMP4A-211ENST00000609024 FAM155AB1AL88 458 aaPredicted RBP22.61■■□□□ 1.21
CHMP4A-211ENST00000609024 TMPOP42166 694 aaKnown RBP22.61■■□□□ 1.21
CHMP4A-211ENST00000609024 GPSM2P81274 684 aa22.61■■□□□ 1.21
CHMP4A-211ENST00000609024 SF3B3Q15393 1217 aaKnown RBP22.61■■□□□ 1.21
CHMP4A-211ENST00000609024 HDGFL1Q5TGJ6 251 aa22.61■■□□□ 1.21
CHMP4A-211ENST00000609024 RNF186Q9NXI6 227 aa22.61■■□□□ 1.21
CHMP4A-211ENST00000609024 CHPF2Q9P2E5 772 aa22.61■■□□□ 1.21
CHMP4A-211ENST00000609024 POLLQ9UGP5 575 aa22.61■■□□□ 1.21
CHMP4A-211ENST00000609024 DUOX1Q9NRD9 1551 aa22.6■■□□□ 1.21
CHMP4A-211ENST00000609024 SOX10P56693 466 aa22.6■■□□□ 1.21
CHMP4A-211ENST00000609024 NEUROD2Q15784 382 aa22.6■■□□□ 1.21
CHMP4A-211ENST00000609024 RTL5Q5HYW3 569 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms