RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 CNGB1Q14028 1251 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-220ENST00000608858 TNIP1Q15025 636 aa12.54□□□□□ -0.4
CTCFL-220ENST00000608858 PKN2Q16513 984 aaKnown RBP12.54□□□□□ -0.4
CTCFL-220ENST00000608858 DCPSQ96C86 337 aaKnown RBP12.54□□□□□ -0.4
CTCFL-220ENST00000608858 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-220ENST00000608858 SLC10A3P09131 477 aa12.53□□□□□ -0.4
CTCFL-220ENST00000608858 SUSD4Q5VX71 490 aa12.53□□□□□ -0.4
CTCFL-220ENST00000608858 MOB2Q70IA6 237 aa12.53□□□□□ -0.4
CTCFL-220ENST00000608858 CRAMP1Q96RY5 1269 aa12.53□□□□□ -0.4
CTCFL-220ENST00000608858 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
CTCFL-220ENST00000608858 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
CTCFL-220ENST00000608858 YDJCA8MPS7 323 aa12.52□□□□□ -0.41
CTCFL-220ENST00000608858 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
CTCFL-220ENST00000608858 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
CTCFL-220ENST00000608858 GRIPAP1Q4V328 841 aa12.52□□□□□ -0.41
CTCFL-220ENST00000608858 DPP8Q6V1X1 898 aaPredicted RBP12.52□□□□□ -0.41
CTCFL-220ENST00000608858 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.41
CTCFL-220ENST00000608858 NYXQ9GZU5 481 aa12.52□□□□□ -0.41
CTCFL-220ENST00000608858 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
CTCFL-220ENST00000608858 KCNQ5Q9NR82 932 aa12.52□□□□□ -0.41
CTCFL-220ENST00000608858 ASTN2O75129 1339 aaPredicted RBP12.52□□□□□ -0.41
CTCFL-220ENST00000608858 U2SURPO15042 1029 aaKnown RBP12.51□□□□□ -0.41
CTCFL-220ENST00000608858 DIAPH1O60610 1272 aaKnown RBP12.51□□□□□ -0.41
CTCFL-220ENST00000608858 MPNDQ8N594 471 aa12.51□□□□□ -0.41
CTCFL-220ENST00000608858 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
CTCFL-220ENST00000608858 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
CTCFL-220ENST00000608858 ATP6V0A2Q9Y487 856 aa12.51□□□□□ -0.41
CTCFL-220ENST00000608858 UBE2Q2LH0YL09 131 aa12.5□□□□□ -0.41
CTCFL-220ENST00000608858 GPR25O00155 361 aa12.5□□□□□ -0.41
CTCFL-220ENST00000608858 PSMD14O00487 310 aa12.5□□□□□ -0.41
CTCFL-220ENST00000608858 RIMBP2O15034 1052 aa12.5□□□□□ -0.41
CTCFL-220ENST00000608858 EN2P19622 333 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-220ENST00000608858 FBXO46Q6PJ61 603 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-220ENST00000608858 RASAL3Q86YV0 1011 aa12.5□□□□□ -0.41
CTCFL-220ENST00000608858 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
CTCFL-220ENST00000608858 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
CTCFL-220ENST00000608858 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
CTCFL-220ENST00000608858 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
CTCFL-220ENST00000608858 CDCA5Q96FF9 252 aa12.49□□□□□ -0.41
CTCFL-220ENST00000608858 PHACTR3Q96KR7 559 aa12.49□□□□□ -0.41
CTCFL-220ENST00000608858 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
CTCFL-220ENST00000608858 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
CTCFL-220ENST00000608858 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
CTCFL-220ENST00000608858 SZT2Q5T011 3432 aa12.49□□□□□ -0.41
CTCFL-220ENST00000608858 MKI67P46013 3256 aaKnown RBP12.48□□□□□ -0.41
CTCFL-220ENST00000608858 MYL6BP14649 208 aa12.48□□□□□ -0.41
CTCFL-220ENST00000608858 KIAA2012Q0VF49 1180 aa12.48□□□□□ -0.41
CTCFL-220ENST00000608858 PRAMEF18Q5VWM3 479 aa12.48□□□□□ -0.41
CTCFL-220ENST00000608858 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
CTCFL-220ENST00000608858 MCM10Q7L590 875 aa12.48□□□□□ -0.41
CTCFL-220ENST00000608858 NLRP3Q96P20 1036 aa12.48□□□□□ -0.41
CTCFL-220ENST00000608858 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
CTCFL-220ENST00000608858 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
CTCFL-220ENST00000608858 DCTN1Q14203 1278 aa12.47□□□□□ -0.41
CTCFL-220ENST00000608858 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
CTCFL-220ENST00000608858 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
CTCFL-220ENST00000608858 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
CTCFL-220ENST00000608858 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
CTCFL-220ENST00000608858 RTFDC1Q9BY42 306 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-220ENST00000608858 ABCC4O15439 1325 aa12.46□□□□□ -0.41
CTCFL-220ENST00000608858 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.41
CTCFL-220ENST00000608858 FKTNO75072 461 aa12.46□□□□□ -0.41
CTCFL-220ENST00000608858 GGA3Q9NZ52 723 aa12.46□□□□□ -0.41
CTCFL-220ENST00000608858 BBOX1O75936 387 aa12.45□□□□□ -0.42
CTCFL-220ENST00000608858 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
CTCFL-220ENST00000608858 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
CTCFL-220ENST00000608858 DPF2Q92785 391 aa12.45□□□□□ -0.42
CTCFL-220ENST00000608858 TRIM17Q9Y577 477 aa12.45□□□□□ -0.42
CTCFL-220ENST00000608858 MAP3K15Q6ZN16 1313 aa12.44□□□□□ -0.42
CTCFL-220ENST00000608858 CDHR2Q9BYE9 1310 aa12.44□□□□□ -0.42
CTCFL-220ENST00000608858 NTSR2O95665 410 aa12.44□□□□□ -0.42
CTCFL-220ENST00000608858 SCARF1Q14162 830 aa12.44□□□□□ -0.42
CTCFL-220ENST00000608858 TTLL12Q14166 644 aaPredicted RBP12.44□□□□□ -0.42
CTCFL-220ENST00000608858 WASHC4Q2M389 1173 aa12.44□□□□□ -0.42
CTCFL-220ENST00000608858 KIF4BQ2VIQ3 1234 aa12.44□□□□□ -0.42
CTCFL-220ENST00000608858 ANGEL2Q5VTE6 544 aaKnown RBP12.44□□□□□ -0.42
CTCFL-220ENST00000608858 KIF6Q6ZMV9 814 aa12.44□□□□□ -0.42
CTCFL-220ENST00000608858 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
CTCFL-220ENST00000608858 H0YGN5 161 aa12.43□□□□□ -0.42
CTCFL-220ENST00000608858 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
CTCFL-220ENST00000608858 MYCP01106 439 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-220ENST00000608858 TM4SF4P48230 202 aa12.43□□□□□ -0.42
CTCFL-220ENST00000608858 PRKG1Q13976 671 aa12.43□□□□□ -0.42
CTCFL-220ENST00000608858 CC2D1BQ5T0F9 858 aaKnown RBP12.43□□□□□ -0.42
CTCFL-220ENST00000608858 ZNF34Q8IZ26 560 aa12.43□□□□□ -0.42
CTCFL-220ENST00000608858 NSFL1CQ9UNZ2 370 aaKnown RBP12.43□□□□□ -0.42
CTCFL-220ENST00000608858 PPP1R42Q7Z4L9 355 aa12.42□□□□□ -0.42
CTCFL-220ENST00000608858 RTF1Q92541 710 aaKnown RBP12.42□□□□□ -0.42
CTCFL-220ENST00000608858 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
CTCFL-220ENST00000608858 NUP98P52948 1817 aa12.41□□□□□ -0.42
CTCFL-220ENST00000608858 RGL2O15211 777 aa12.41□□□□□ -0.42
CTCFL-220ENST00000608858 TAF1P21675 1872 aa12.41□□□□□ -0.42
CTCFL-220ENST00000608858 DDX46Q7L014 1031 aaKnown RBP12.41□□□□□ -0.42
CTCFL-220ENST00000608858 OTOP1Q7RTM1 612 aa12.41□□□□□ -0.42
CTCFL-220ENST00000608858 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
CTCFL-220ENST00000608858 UTP14AQ9BVJ6 771 aaKnown RBP12.41□□□□□ -0.42
CTCFL-220ENST00000608858 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
CTCFL-220ENST00000608858 A0A0C4DFX4 3053 aa12.4□□□□□ -0.42
CTCFL-220ENST00000608858 TRIOBPQ9H2D6 2365 aa12.4□□□□□ -0.42
CTCFL-220ENST00000608858 ECE2O60344 883 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms