RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 IQSEC2Q5JU85 1478 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 MLLT1Q03111 559 aaPredicted RBP4.4□□□□□ -1.71
LINC01278-202ENST00000608623 NUP133Q8WUM0 1156 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 CRNKL1Q9BZJ0 848 aaKnown RBP4.4□□□□□ -1.71
LINC01278-202ENST00000608623 EHMT1Q9H9B1 1298 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 CNPY2Q9Y2B0 182 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 PTPN23Q9H3S7 1636 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 MAP3K4Q9Y6R4 1608 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 ERBB3P21860 1342 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 IGFBP4P22692 258 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 NAA16Q6N069 864 aaPredicted RBP4.4□□□□□ -1.71
LINC01278-202ENST00000608623 NCAPG2Q86XI2 1143 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 MICALL2Q8IY33 904 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 FAM200AQ8TCP9 573 aa4.4□□□□□ -1.71
LINC01278-202ENST00000608623 KIF28PB7ZC32 967 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 PLSCR1O15162 318 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 ZEB2O60315 1214 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 IRX6P78412 446 aaPredicted RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 MFSD14BQ5SR56 506 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 ZNF784Q8NCA9 323 aaPredicted RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 BRMS1Q9HCU9 246 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 NMRK2Q9NPI5 230 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 M0QZ92 97 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 GTPBP6O43824 516 aaPredicted RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 RANBP6O60518 1105 aaKnown RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 ALDH1A1P00352 501 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 GNAI2P04899 355 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 HSPA6P17066 643 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 XBP1P17861 261 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 MTHFSDQ2M296 383 aaKnown RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 SMIM5Q71RC9 77 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 APOBEC3FQ8IUX4 373 aaKnown RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 RETREG2Q8NC44 543 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 TBC1D22AQ8WUA7 517 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 OTUD5Q96G74 571 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 BRIP1Q9BX63 1249 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 AP5M1Q9H0R1 490 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 ARHGEF10LQ9HCE6 1279 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 KIF3AQ9Y496 699 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 CEP170BQ9Y4F5 1589 aaPredicted RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 ARHGEF40Q8TER5 1519 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 MYO5CQ9NQX4 1742 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 PDE8AO60658 829 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 TRIM21P19474 475 aaKnown RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 CCT4P50991 539 aaKnown RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 NOGQ13253 232 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 TEX11Q8IYF3 940 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 MIER1Q8N108 512 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 PPP2R3CQ969Q6 453 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 ERO1AQ96HE7 468 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 ZNF496Q96IT1 587 aaPredicted RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 CHPF2Q9P2E5 772 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 SEC63Q9UGP8 760 aaKnown RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 GINS2Q9Y248 185 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 CTTNBP2Q8WZ74 1663 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 PI4KAP2A4QPH2 592 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 USP17L3A6NCW0 530 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 USP17L4A6NCW7 530 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 PPP2R1AP30153 589 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 ANKRD45Q5TZF3 282 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 MFSD14CQ5VZR4 134 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 USP17L1Q7RTZ2 530 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 TTC6Q86TZ1 520 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 AACSQ86V21 672 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 VSIG10Q8N0Z9 540 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 PI4KAP1Q8N8J0 262 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 TSR2Q969E8 191 aaKnown RBP4.39□□□□□ -1.71
LINC01278-202ENST00000608623 NARFQ9UHQ1 456 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 KIF16BQ96L93 1317 aa4.39□□□□□ -1.71
LINC01278-202ENST00000608623 GLI2P10070 1586 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 PLA2R1Q13018 1463 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 KBTBD13C9JR72 458 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 ZKSCAN1P17029 563 aaPredicted RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 IL6STP40189 918 aaPredicted RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 KCTD2Q14681 263 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 MAP3K11Q16584 847 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 CPXCR1Q8N123 301 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 SNRKQ9NRH2 765 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 ZNRF3Q9ULT6 936 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 SAMM50Q9Y512 469 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 ZBED4O75132 1171 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 CYP7A1P22680 504 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 EXOSC9Q06265 439 aaKnown RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 ATP2B3Q16720 1220 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 PPP4R3BQ5MIZ7 849 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 LMBR1LQ6UX01 489 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 CHST3Q7LGC8 479 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 KCNG4Q8TDN1 519 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 CEP89Q96ST8 783 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 STX8Q9UNK0 236 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 SAMD9LQ8IVG5 1584 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 PARD3Q8TEW0 1356 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 KRT18P05783 430 aaKnown RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 HSPA1AP0DMV8 641 aaKnown RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 HSPA1BP0DMV9 641 aaKnown RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 NCBP1Q09161 790 aaKnown RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 RNF20Q5VTR2 975 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 LDHDQ86WU2 507 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 FAM184AQ8NB25 1140 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 NAPBQ9H115 298 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms