RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
SSBP4-214ENST00000607020 PDIA6Q15084 440 aa19.8■□□□□ 0.76
SSBP4-214ENST00000607020 NFE2L2Q16236 605 aa19.79■□□□□ 0.76
SSBP4-214ENST00000607020 DPF2Q92785 391 aa19.79■□□□□ 0.76
SSBP4-214ENST00000607020 BCL2L13Q9BXK5 485 aa19.79■□□□□ 0.76
SSBP4-214ENST00000607020 CNOT7Q9UIV1 285 aaKnown RBP19.79■□□□□ 0.76
SSBP4-214ENST00000607020 RAD17O75943 681 aa19.78■□□□□ 0.76
SSBP4-214ENST00000607020 DGKZQ13574 1117 aa19.78■□□□□ 0.76
SSBP4-214ENST00000607020 TRPM4Q8TD43 1214 aa19.78■□□□□ 0.76
SSBP4-214ENST00000607020 H7C1D1 291 aa19.77■□□□□ 0.76
SSBP4-214ENST00000607020 TMC4Q7Z404 712 aa19.77■□□□□ 0.76
SSBP4-214ENST00000607020 THUMPD2Q9BTF0 503 aaKnown RBP19.77■□□□□ 0.76
SSBP4-214ENST00000607020 YDJCA8MPS7 323 aa19.76■□□□□ 0.75
SSBP4-214ENST00000607020 GRAPQ13588 217 aa19.76■□□□□ 0.75
SSBP4-214ENST00000607020 HSP90AB3PQ58FF7 597 aa19.76■□□□□ 0.75
SSBP4-214ENST00000607020 GRAPLQ8TC17 118 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-214ENST00000607020 ZIC5Q96T25 663 aa19.76■□□□□ 0.75
SSBP4-214ENST00000607020 ZNF408Q9H9D4 720 aa19.76■□□□□ 0.75
SSBP4-214ENST00000607020 BABAM1Q9NWV8 329 aa19.76■□□□□ 0.75
SSBP4-214ENST00000607020 HUNKP57058 714 aa19.75■□□□□ 0.75
SSBP4-214ENST00000607020 DDX46Q7L014 1031 aaKnown RBP19.75■□□□□ 0.75
SSBP4-214ENST00000607020 USP48Q86UV5 1035 aa19.75■□□□□ 0.75
SSBP4-214ENST00000607020 NLRP10Q86W26 655 aa19.75■□□□□ 0.75
SSBP4-214ENST00000607020 SAGE1Q9NXZ1 904 aa19.75■□□□□ 0.75
SSBP4-214ENST00000607020 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
SSBP4-214ENST00000607020 MICALL2Q8IY33 904 aa19.74■□□□□ 0.75
SSBP4-214ENST00000607020 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
SSBP4-214ENST00000607020 LAMB4A4D0S4 1761 aa19.74■□□□□ 0.75
SSBP4-214ENST00000607020 TRPM7Q96QT4 1865 aa19.73■□□□□ 0.75
SSBP4-214ENST00000607020 FAM155AB1AL88 458 aaPredicted RBP19.73■□□□□ 0.75
SSBP4-214ENST00000607020 TCIRG1Q13488 830 aa19.73■□□□□ 0.75
SSBP4-214ENST00000607020 PROSER3Q2NL68 480 aa19.73■□□□□ 0.75
SSBP4-214ENST00000607020 RGMBQ6NW40 437 aa19.73■□□□□ 0.75
SSBP4-214ENST00000607020 CCDC102AQ96A19 550 aa19.73■□□□□ 0.75
SSBP4-214ENST00000607020 CFAP44Q96MT7 982 aa19.73■□□□□ 0.75
SSBP4-214ENST00000607020 NUP98P52948 1817 aa19.73■□□□□ 0.75
SSBP4-214ENST00000607020 SHTN1A0MZ66 631 aa19.72■□□□□ 0.75
SSBP4-214ENST00000607020 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
SSBP4-214ENST00000607020 TRMT112Q9UI30 125 aaKnown RBP19.72■□□□□ 0.75
SSBP4-214ENST00000607020 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
SSBP4-214ENST00000607020 SH3TC1Q8TE82 1336 aa19.72■□□□□ 0.75
SSBP4-214ENST00000607020 RPS12P25398 132 aaKnown RBP19.71■□□□□ 0.75
SSBP4-214ENST00000607020 COPS6Q7L5N1 327 aa19.71■□□□□ 0.75
SSBP4-214ENST00000607020 KRT26Q7Z3Y9 468 aa19.71■□□□□ 0.75
SSBP4-214ENST00000607020 C2orf69Q8N8R5 385 aa19.71■□□□□ 0.75
SSBP4-214ENST00000607020 ZBTB12Q9Y330 459 aaPredicted RBP19.71■□□□□ 0.75
SSBP4-214ENST00000607020 KDM3BQ7LBC6 1761 aa19.7■□□□□ 0.74
SSBP4-214ENST00000607020 PSMD14O00487 310 aa19.7■□□□□ 0.74
SSBP4-214ENST00000607020 WASHC4Q2M389 1173 aa19.7■□□□□ 0.74
SSBP4-214ENST00000607020 SAMD7Q7Z3H4 446 aa19.7■□□□□ 0.74
SSBP4-214ENST00000607020 GBA2Q9HCG7 927 aaPredicted RBP19.7■□□□□ 0.74
SSBP4-214ENST00000607020 ANXA1P04083 346 aa19.68■□□□□ 0.74
SSBP4-214ENST00000607020 KIF23Q02241 960 aaPredicted RBP19.68■□□□□ 0.74
SSBP4-214ENST00000607020 SF3B3Q15393 1217 aaKnown RBP19.68■□□□□ 0.74
SSBP4-214ENST00000607020 DLK2Q6UY11 383 aa19.68■□□□□ 0.74
SSBP4-214ENST00000607020 XAGE3Q8WTP9 111 aa19.68■□□□□ 0.74
SSBP4-214ENST00000607020 DCPSQ96C86 337 aaKnown RBP19.67■□□□□ 0.74
SSBP4-214ENST00000607020 RNF186Q9NXI6 227 aa19.67■□□□□ 0.74
SSBP4-214ENST00000607020 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
SSBP4-214ENST00000607020 EGFRP00533 1210 aa19.66■□□□□ 0.74
SSBP4-214ENST00000607020 ZNF157P51786 506 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-214ENST00000607020 AIMP1Q12904 312 aaKnown RBP19.66■□□□□ 0.74
SSBP4-214ENST00000607020 TBC1D10BQ4KMP7 808 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-214ENST00000607020 REM2Q8IYK8 340 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-214ENST00000607020 POLLQ9UGP5 575 aa19.66■□□□□ 0.74
SSBP4-214ENST00000607020 NSFL1CQ9UNZ2 370 aaKnown RBP19.66■□□□□ 0.74
SSBP4-214ENST00000607020 DBNDD1Q9H9R9 158 aa19.65■□□□□ 0.74
SSBP4-214ENST00000607020 TRPA1O75762 1119 aa19.64■□□□□ 0.73
SSBP4-214ENST00000607020 SLC10A3P09131 477 aa19.64■□□□□ 0.73
SSBP4-214ENST00000607020 VIL1P09327 827 aaKnown RBP19.64■□□□□ 0.73
SSBP4-214ENST00000607020 RIPK4P57078 832 aa19.64■□□□□ 0.73
SSBP4-214ENST00000607020 CELF1Q92879 486 aaKnown RBP19.64■□□□□ 0.73
SSBP4-214ENST00000607020 CSRNP1Q96S65 589 aa19.64■□□□□ 0.73
SSBP4-214ENST00000607020 EYA3Q99504 573 aa19.64■□□□□ 0.73
SSBP4-214ENST00000607020 DUOX1Q9NRD9 1551 aa19.63■□□□□ 0.73
SSBP4-214ENST00000607020 ADM5C9JUS6 153 aa19.63■□□□□ 0.73
SSBP4-214ENST00000607020 PLBD2Q8NHP8 589 aa19.63■□□□□ 0.73
SSBP4-214ENST00000607020 ISCA1Q9BUE6 129 aa19.63■□□□□ 0.73
SSBP4-214ENST00000607020 KCNQ5Q9NR82 932 aa19.63■□□□□ 0.73
SSBP4-214ENST00000607020 CASP8AP2Q9UKL3 1982 aa19.63■□□□□ 0.73
SSBP4-214ENST00000607020 RTL9Q8NET4 1388 aa19.62■□□□□ 0.73
SSBP4-214ENST00000607020 C6orf229H3BNL8 230 aa19.62■□□□□ 0.73
SSBP4-214ENST00000607020 ECE2O60344 883 aa19.62■□□□□ 0.73
SSBP4-214ENST00000607020 GPSM2P81274 684 aa19.62■□□□□ 0.73
SSBP4-214ENST00000607020 RBM26Q5T8P6 1007 aaKnown RBP19.62■□□□□ 0.73
SSBP4-214ENST00000607020 SULF1Q8IWU6 871 aa19.62■□□□□ 0.73
SSBP4-214ENST00000607020 RIMBP2O15034 1052 aa19.61■□□□□ 0.73
SSBP4-214ENST00000607020 LMOD3Q0VAK6 560 aa19.61■□□□□ 0.73
SSBP4-214ENST00000607020 TRIM28Q13263 835 aaKnown RBP19.61■□□□□ 0.73
SSBP4-214ENST00000607020 KIF4BQ2VIQ3 1234 aa19.61■□□□□ 0.73
SSBP4-214ENST00000607020 ANKRD13DQ6ZTN6 518 aa19.61■□□□□ 0.73
SSBP4-214ENST00000607020 CTU1Q7Z7A3 348 aaKnown RBP19.61■□□□□ 0.73
SSBP4-214ENST00000607020 TBC1D16Q8TBP0 767 aa19.61■□□□□ 0.73
SSBP4-214ENST00000607020 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
SSBP4-214ENST00000607020 CHL1O00533 1208 aa19.6■□□□□ 0.73
SSBP4-214ENST00000607020 ZNF280AP59817 542 aaPredicted RBP19.6■□□□□ 0.73
SSBP4-214ENST00000607020 RPS8P62241 208 aaKnown RBP19.6■□□□□ 0.73
SSBP4-214ENST00000607020 FKBP1BP68106 108 aa19.6■□□□□ 0.73
SSBP4-214ENST00000607020 DOK7Q18PE1 504 aa19.6■□□□□ 0.73
SSBP4-214ENST00000607020 NECTIN2Q92692 538 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms