RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 MRPL50Q8N5N7 158 aaKnown RBP21.06■□□□□ 0.96
LINC00240-203ENST00000606878 ARFGEF2Q9Y6D5 1785 aa21.05■□□□□ 0.96
LINC00240-203ENST00000606878 SBF1O95248 1867 aa21.05■□□□□ 0.96
LINC00240-203ENST00000606878 CT47B1P0C2W7 299 aaPredicted RBP21.05■□□□□ 0.96
LINC00240-203ENST00000606878 C1QTNF8P60827 252 aa21.05■□□□□ 0.96
LINC00240-203ENST00000606878 UBE3BQ7Z3V4 1068 aa21.05■□□□□ 0.96
LINC00240-203ENST00000606878 MPNDQ8N594 471 aa21.05■□□□□ 0.96
LINC00240-203ENST00000606878 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
LINC00240-203ENST00000606878 CELF1Q92879 486 aaKnown RBP21.05■□□□□ 0.96
LINC00240-203ENST00000606878 RRAGCQ9HB90 399 aa21.05■□□□□ 0.96
LINC00240-203ENST00000606878 NMRK2Q9NPI5 230 aa21.05■□□□□ 0.96
LINC00240-203ENST00000606878 KIF3CO14782 793 aa21.04■□□□□ 0.96
LINC00240-203ENST00000606878 HNRNPUQ00839 825 aaKnown RBP eCLIP21.04■□□□□ 0.96
LINC00240-203ENST00000606878 ALDH1L2Q3SY69 923 aa21.04■□□□□ 0.96
LINC00240-203ENST00000606878 BEND3Q5T5X7 828 aa21.04■□□□□ 0.96
LINC00240-203ENST00000606878 DPP8Q6V1X1 898 aaPredicted RBP21.04■□□□□ 0.96
LINC00240-203ENST00000606878 SUPT20HQ8NEM7 779 aa21.04■□□□□ 0.96
LINC00240-203ENST00000606878 JDP2Q8WYK2 163 aa21.04■□□□□ 0.96
LINC00240-203ENST00000606878 CACNA1FO60840 1977 aa21.04■□□□□ 0.96
LINC00240-203ENST00000606878 FER1L6Q2WGJ9 1857 aa21.03■□□□□ 0.96
LINC00240-203ENST00000606878 SLC4A10Q6U841 1118 aa21.03■□□□□ 0.96
LINC00240-203ENST00000606878 VPS33BQ9H267 617 aa21.03■□□□□ 0.96
LINC00240-203ENST00000606878 C16orf71Q8IYS4 520 aaPredicted RBP21.02■□□□□ 0.96
LINC00240-203ENST00000606878 LARGE2Q8N3Y3 721 aa21.02■□□□□ 0.96
LINC00240-203ENST00000606878 TTLL11Q8NHH1 800 aa21.02■□□□□ 0.96
LINC00240-203ENST00000606878 CCDC85AQ96PX6 553 aaPredicted RBP21.02■□□□□ 0.96
LINC00240-203ENST00000606878 SEC31BQ9NQW1 1179 aa21.02■□□□□ 0.96
LINC00240-203ENST00000606878 ALDH1L1O75891 902 aa21.01■□□□□ 0.95
LINC00240-203ENST00000606878 VEGFAP15692 232 aaPredicted RBP21.01■□□□□ 0.95
LINC00240-203ENST00000606878 CTSWP56202 376 aa21.01■□□□□ 0.95
LINC00240-203ENST00000606878 RTFDC1Q9BY42 306 aaPredicted RBP21.01■□□□□ 0.95
LINC00240-203ENST00000606878 NSFL1CQ9UNZ2 370 aaKnown RBP21.01■□□□□ 0.95
LINC00240-203ENST00000606878 PTPRCP08575 1304 aa21.01■□□□□ 0.95
LINC00240-203ENST00000606878 SLC51AQ86UW1 340 aa21■□□□□ 0.95
LINC00240-203ENST00000606878 PLA2G12BQ9BX93 195 aa21■□□□□ 0.95
LINC00240-203ENST00000606878 SRCIN1Q9C0H9 1055 aa21■□□□□ 0.95
LINC00240-203ENST00000606878 SMC4Q9NTJ3 1288 aa21■□□□□ 0.95
LINC00240-203ENST00000606878 CACNA1SQ13698 1873 aa21■□□□□ 0.95
LINC00240-203ENST00000606878 SNED1Q8TER0 1413 aa20.99■□□□□ 0.95
LINC00240-203ENST00000606878 PPIP5K2O43314 1243 aa20.99■□□□□ 0.95
LINC00240-203ENST00000606878 TOMM70O94826 608 aa20.99■□□□□ 0.95
LINC00240-203ENST00000606878 DDNO94850 711 aaPredicted RBP20.99■□□□□ 0.95
LINC00240-203ENST00000606878 CASP7P55210 303 aa20.99■□□□□ 0.95
LINC00240-203ENST00000606878 ANKRD18AQ8IVF6 992 aa20.99■□□□□ 0.95
LINC00240-203ENST00000606878 CDC5LQ99459 802 aaKnown RBP20.99■□□□□ 0.95
LINC00240-203ENST00000606878 BCL2L13Q9BXK5 485 aa20.99■□□□□ 0.95
LINC00240-203ENST00000606878 C9orf78Q9NZ63 289 aaPredicted RBP20.99■□□□□ 0.95
LINC00240-203ENST00000606878 FZD9O00144 591 aa20.98■□□□□ 0.95
LINC00240-203ENST00000606878 EIF6P56537 245 aaKnown RBP20.98■□□□□ 0.95
LINC00240-203ENST00000606878 GRM8O00222 908 aa20.97■□□□□ 0.95
LINC00240-203ENST00000606878 NIM1KQ8IY84 436 aa20.97■□□□□ 0.95
LINC00240-203ENST00000606878 GREM2Q9H772 168 aa20.97■□□□□ 0.95
LINC00240-203ENST00000606878 CCDC88AQ3V6T2 1871 aa20.96■□□□□ 0.95
LINC00240-203ENST00000606878 CSF1RP07333 972 aa20.96■□□□□ 0.95
LINC00240-203ENST00000606878 GPSM2P81274 684 aa20.96■□□□□ 0.95
LINC00240-203ENST00000606878 AOC3Q16853 763 aa20.96■□□□□ 0.95
LINC00240-203ENST00000606878 C6orf229H3BNL8 230 aa20.95■□□□□ 0.94
LINC00240-203ENST00000606878 ANKIB1Q9P2G1 1089 aa20.95■□□□□ 0.94
LINC00240-203ENST00000606878 DDX60Q8IY21 1712 aaKnown RBP20.95■□□□□ 0.94
LINC00240-203ENST00000606878 RARSP54136 660 aaKnown RBP20.94■□□□□ 0.94
LINC00240-203ENST00000606878 BRPF1P55201 1214 aaPredicted RBP20.94■□□□□ 0.94
LINC00240-203ENST00000606878 KIAA2012Q0VF49 1180 aa20.94■□□□□ 0.94
LINC00240-203ENST00000606878 WASHC4Q2M389 1173 aa20.94■□□□□ 0.94
LINC00240-203ENST00000606878 RBM46Q8TBY0 533 aaKnown RBP20.94■□□□□ 0.94
LINC00240-203ENST00000606878 ZNRF3Q9ULT6 936 aa20.94■□□□□ 0.94
LINC00240-203ENST00000606878 NOB1Q9ULX3 412 aaKnown RBP20.94■□□□□ 0.94
LINC00240-203ENST00000606878 LAMB2P55268 1798 aa20.93■□□□□ 0.94
LINC00240-203ENST00000606878 POTECB2RU33 542 aa20.93■□□□□ 0.94
LINC00240-203ENST00000606878 IGHMBP2P38935 993 aaKnown RBP20.93■□□□□ 0.94
LINC00240-203ENST00000606878 GPC2Q8N158 579 aa20.93■□□□□ 0.94
LINC00240-203ENST00000606878 EYA3Q99504 573 aa20.93■□□□□ 0.94
LINC00240-203ENST00000606878 BSDC1Q9NW68 430 aaPredicted RBP20.93■□□□□ 0.94
LINC00240-203ENST00000606878 PODXL2Q9NZ53 605 aa20.93■□□□□ 0.94
LINC00240-203ENST00000606878 RTL9Q8NET4 1388 aa20.93■□□□□ 0.94
LINC00240-203ENST00000606878 IQCA1LA6NCM1 817 aa20.92■□□□□ 0.94
LINC00240-203ENST00000606878 ITGA6P23229 1130 aa20.92■□□□□ 0.94
LINC00240-203ENST00000606878 FOXO4P98177 505 aa20.92■□□□□ 0.94
LINC00240-203ENST00000606878 TBC1D16Q8TBP0 767 aa20.92■□□□□ 0.94
LINC00240-203ENST00000606878 L3MBTL3Q96JM7 780 aaPredicted RBP20.92■□□□□ 0.94
LINC00240-203ENST00000606878 POLLQ9UGP5 575 aa20.92■□□□□ 0.94
LINC00240-203ENST00000606878 GJA3Q9Y6H8 435 aa20.92■□□□□ 0.94
LINC00240-203ENST00000606878 ZNF541Q9H0D2 1346 aa20.92■□□□□ 0.94
LINC00240-203ENST00000606878 DICER1Q9UPY3 1922 aaKnown RBP20.92■□□□□ 0.94
LINC00240-203ENST00000606878 ANKRD18BA2A2Z9 1011 aa20.91■□□□□ 0.94
LINC00240-203ENST00000606878 MPHOSPH8Q99549 860 aa20.91■□□□□ 0.94
LINC00240-203ENST00000606878 API5Q9BZZ5 524 aaKnown RBP20.91■□□□□ 0.94
LINC00240-203ENST00000606878 ZC3H12CQ9C0D7 883 aaKnown RBP20.91■□□□□ 0.94
LINC00240-203ENST00000606878 GGA1Q9UJY5 639 aa20.91■□□□□ 0.94
LINC00240-203ENST00000606878 CHMP3Q9Y3E7 222 aa20.91■□□□□ 0.94
LINC00240-203ENST00000606878 RIMBP2O15034 1052 aa20.9■□□□□ 0.94
LINC00240-203ENST00000606878 IFIT5Q13325 482 aaKnown RBP20.9■□□□□ 0.94
LINC00240-203ENST00000606878 FAM161AQ3B820 660 aa20.9■□□□□ 0.94
LINC00240-203ENST00000606878 LMBR1LQ6UX01 489 aa20.9■□□□□ 0.94
LINC00240-203ENST00000606878 MINPP1Q9UNW1 487 aa20.9■□□□□ 0.94
LINC00240-203ENST00000606878 TAF1P21675 1872 aa20.9■□□□□ 0.94
LINC00240-203ENST00000606878 XDHP47989 1333 aa20.89■□□□□ 0.93
LINC00240-203ENST00000606878 NBPF7P0C2Y1 421 aaPredicted RBP20.89■□□□□ 0.93
LINC00240-203ENST00000606878 FSTL1Q12841 308 aa20.89■□□□□ 0.93
LINC00240-203ENST00000606878 UTYO14607 1347 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 ZBED9Q6R2W3 1325 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms