RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 TNNI3KQ59H18 835 aa26.4■■□□□ 1.82
USP6NL-204ENST00000606752 USPL1Q5W0Q7 1092 aa26.4■■□□□ 1.82
USP6NL-204ENST00000606752 ARHGEF1Q92888 912 aaKnown RBP26.4■■□□□ 1.82
USP6NL-204ENST00000606752 CCDC85AQ96PX6 553 aaPredicted RBP26.4■■□□□ 1.82
USP6NL-204ENST00000606752 BCL2L12Q9HB09 334 aa26.4■■□□□ 1.82
USP6NL-204ENST00000606752 RGS17Q9UGC6 210 aaPredicted RBP26.4■■□□□ 1.82
USP6NL-204ENST00000606752 FPGT-TNNI3KV9GXZ4 949 aa26.4■■□□□ 1.82
USP6NL-204ENST00000606752 TAF1LQ8IZX4 1826 aa26.4■■□□□ 1.82
USP6NL-204ENST00000606752 HMGB2P26583 209 aaKnown RBP26.39■■□□□ 1.82
USP6NL-204ENST00000606752 RILPL2Q969X0 211 aa26.39■■□□□ 1.82
USP6NL-204ENST00000606752 BCORQ6W2J9 1755 aa26.39■■□□□ 1.82
USP6NL-204ENST00000606752 LRRC24Q50LG9 513 aa26.39■■□□□ 1.81
USP6NL-204ENST00000606752 TAF7LQ5H9L4 462 aa26.39■■□□□ 1.81
USP6NL-204ENST00000606752 TRAPPC3LQ5T215 181 aa26.39■■□□□ 1.81
USP6NL-204ENST00000606752 AMIGO3Q86WK7 504 aa26.39■■□□□ 1.81
USP6NL-204ENST00000606752 C22orf23Q9BZE7 217 aa26.39■■□□□ 1.81
USP6NL-204ENST00000606752 GREM2Q9H772 168 aa26.39■■□□□ 1.81
USP6NL-204ENST00000606752 ITGA6P23229 1130 aa26.38■■□□□ 1.81
USP6NL-204ENST00000606752 GPR108Q9NPR9 543 aa26.38■■□□□ 1.81
USP6NL-204ENST00000606752 C4BP0C0L5 1744 aa26.38■■□□□ 1.81
USP6NL-204ENST00000606752 ANKRD18BA2A2Z9 1011 aa26.37■■□□□ 1.81
USP6NL-204ENST00000606752 HCLS1P14317 486 aaPredicted RBP26.37■■□□□ 1.81
USP6NL-204ENST00000606752 DDRGK1Q96HY6 314 aa26.37■■□□□ 1.81
USP6NL-204ENST00000606752 PUS3Q9BZE2 481 aaKnown RBP26.37■■□□□ 1.81
USP6NL-204ENST00000606752 SRP68Q9UHB9 627 aaKnown RBP26.37■■□□□ 1.81
USP6NL-204ENST00000606752 ADRA2BP18089 450 aa26.37■■□□□ 1.81
USP6NL-204ENST00000606752 TLR7Q9NYK1 1049 aaKnown RBP26.37■■□□□ 1.81
USP6NL-204ENST00000606752 RFC4P35249 363 aa26.36■■□□□ 1.81
USP6NL-204ENST00000606752 TBC1D9BQ66K14 1250 aa26.36■■□□□ 1.81
USP6NL-204ENST00000606752 CNTROBQ8N137 903 aa26.35■■□□□ 1.81
USP6NL-204ENST00000606752 EP400Q96L91 3159 aa26.35■■□□□ 1.81
USP6NL-204ENST00000606752 CEP126Q9P2H0 1117 aa26.35■■□□□ 1.81
USP6NL-204ENST00000606752 TXNRD1Q16881 649 aa26.34■■□□□ 1.81
USP6NL-204ENST00000606752 POTEAQ6S8J7 498 aa26.34■■□□□ 1.81
USP6NL-204ENST00000606752 BICDL1Q6ZP65 573 aa26.34■■□□□ 1.81
USP6NL-204ENST00000606752 SETDB2Q96T68 719 aa26.34■■□□□ 1.81
USP6NL-204ENST00000606752 DBNLQ9UJU6 430 aaKnown RBP26.34■■□□□ 1.81
USP6NL-204ENST00000606752 TUBGCP6Q96RT7 1819 aa26.33■■□□□ 1.81
USP6NL-204ENST00000606752 PLSCR1O15162 318 aa26.33■■□□□ 1.81
USP6NL-204ENST00000606752 PHF14O94880 888 aa26.33■■□□□ 1.81
USP6NL-204ENST00000606752 PROM2Q8N271 834 aa26.33■■□□□ 1.81
USP6NL-204ENST00000606752 SCN7AQ01118 1682 aa26.33■■□□□ 1.81
USP6NL-204ENST00000606752 MAP4K4O95819 1239 aaPredicted RBP26.32■■□□□ 1.8
USP6NL-204ENST00000606752 CHMLP26374 656 aa26.32■■□□□ 1.8
USP6NL-204ENST00000606752 LDHAL6AQ6ZMR3 332 aa26.32■■□□□ 1.8
USP6NL-204ENST00000606752 RBM25P49756 843 aaKnown RBP26.32■■□□□ 1.8
USP6NL-204ENST00000606752 RIPOR2Q9Y4F9 1068 aa26.32■■□□□ 1.8
USP6NL-204ENST00000606752 MYH3P11055 1940 aa26.31■■□□□ 1.8
USP6NL-204ENST00000606752 CCDC152Q4G0S7 254 aa26.31■■□□□ 1.8
USP6NL-204ENST00000606752 NYXQ9GZU5 481 aa26.31■■□□□ 1.8
USP6NL-204ENST00000606752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.3■■□□□ 1.8
USP6NL-204ENST00000606752 APBA3O96018 575 aa26.3■■□□□ 1.8
USP6NL-204ENST00000606752 DBNDD2Q9BQY9 259 aa26.3■■□□□ 1.8
USP6NL-204ENST00000606752 AKAP2Q9Y2D5 859 aa26.3■■□□□ 1.8
USP6NL-204ENST00000606752 ATP5JP18859 108 aa26.3■■□□□ 1.8
USP6NL-204ENST00000606752 ERFEQ4G0M1 354 aa26.3■■□□□ 1.8
USP6NL-204ENST00000606752 SSFA2P28290 1259 aa26.29■■□□□ 1.8
USP6NL-204ENST00000606752 TIMM10P62072 90 aa26.29■■□□□ 1.8
USP6NL-204ENST00000606752 SLC10A5Q5PT55 438 aa26.29■■□□□ 1.8
USP6NL-204ENST00000606752 EVI5LQ96CN4 794 aa26.29■■□□□ 1.8
USP6NL-204ENST00000606752 NEUROD6Q96NK8 337 aa26.29■■□□□ 1.8
USP6NL-204ENST00000606752 REC8O95072 547 aa26.28■■□□□ 1.8
USP6NL-204ENST00000606752 GTF2E1P29083 439 aaPredicted RBP26.28■■□□□ 1.8
USP6NL-204ENST00000606752 CNNM1Q9NRU3 951 aa26.28■■□□□ 1.8
USP6NL-204ENST00000606752 RTL9Q8NET4 1388 aa26.28■■□□□ 1.8
USP6NL-204ENST00000606752 ESYT1Q9BSJ8 1104 aa26.28■■□□□ 1.8
USP6NL-204ENST00000606752 BOLA2Q9H3K6 86 aa26.28■■□□□ 1.8
USP6NL-204ENST00000606752 A0A1B0GUL7 405 aa26.27■■□□□ 1.8
USP6NL-204ENST00000606752 MSH5O43196 834 aa26.27■■□□□ 1.8
USP6NL-204ENST00000606752 TPTE2Q6XPS3 522 aa26.27■■□□□ 1.8
USP6NL-204ENST00000606752 NBPF5PQ86XG9 351 aaPredicted RBP26.27■■□□□ 1.8
USP6NL-204ENST00000606752 METTL24Q5JXM2 366 aa26.26■■□□□ 1.79
USP6NL-204ENST00000606752 USP26Q9BXU7 913 aa26.26■■□□□ 1.79
USP6NL-204ENST00000606752 SF3B3Q15393 1217 aaKnown RBP26.25■■□□□ 1.79
USP6NL-204ENST00000606752 ZNF609O15014 1411 aa26.25■■□□□ 1.79
USP6NL-204ENST00000606752 DDX60Q8IY21 1712 aaKnown RBP26.24■■□□□ 1.79
USP6NL-204ENST00000606752 SEC31BQ9NQW1 1179 aa26.24■■□□□ 1.79
USP6NL-204ENST00000606752 MPHOSPH8Q99549 860 aa26.23■■□□□ 1.79
USP6NL-204ENST00000606752 C4AP0C0L4 1744 aa26.22■■□□□ 1.79
USP6NL-204ENST00000606752 NFIXQ14938 502 aa26.22■■□□□ 1.79
USP6NL-204ENST00000606752 UBR3Q6ZT12 1888 aa26.22■■□□□ 1.79
USP6NL-204ENST00000606752 MROH5Q6ZUA9 1318 aa26.22■■□□□ 1.79
USP6NL-204ENST00000606752 RIC1Q4ADV7 1423 aa26.22■■□□□ 1.79
USP6NL-204ENST00000606752 LAMB2P55268 1798 aa26.22■■□□□ 1.79
USP6NL-204ENST00000606752 IGHMBP2P38935 993 aaKnown RBP26.21■■□□□ 1.79
USP6NL-204ENST00000606752 VGLL2Q8N8G2 317 aa26.21■■□□□ 1.79
USP6NL-204ENST00000606752 HAUS7Q99871 368 aa26.21■■□□□ 1.79
USP6NL-204ENST00000606752 PDE8BO95263 885 aa26.21■■□□□ 1.79
USP6NL-204ENST00000606752 GYS1P13807 737 aa26.21■■□□□ 1.79
USP6NL-204ENST00000606752 CDC5LQ99459 802 aaKnown RBP26.21■■□□□ 1.79
USP6NL-204ENST00000606752 CARMIL3Q8ND23 1372 aa26.2■■□□□ 1.79
USP6NL-204ENST00000606752 ABCC12Q96J65 1359 aa26.2■■□□□ 1.79
USP6NL-204ENST00000606752 HIP1O00291 1037 aa26.2■■□□□ 1.78
USP6NL-204ENST00000606752 ATP2B3Q16720 1220 aa26.2■■□□□ 1.78
USP6NL-204ENST00000606752 C3orf67Q6ZVT6 689 aa26.2■■□□□ 1.78
USP6NL-204ENST00000606752 XAGE2Q96GT9 111 aa26.2■■□□□ 1.78
USP6NL-204ENST00000606752 NLRP3Q96P20 1036 aa26.2■■□□□ 1.78
USP6NL-204ENST00000606752 COL24A1Q17RW2 1714 aa26.2■■□□□ 1.78
USP6NL-204ENST00000606752 DIAPH3Q9NSV4 1193 aa26.19■■□□□ 1.78
USP6NL-204ENST00000606752 CCDC158Q5M9N0 1113 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms