RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 GIGYF2Q6Y7W6 1299 aaKnown RBP23.86■■□□□ 1.41
MMP28-201ENST00000605424 DBNDD2Q9BQY9 259 aa23.86■■□□□ 1.41
MMP28-201ENST00000605424 RBM8AQ9Y5S9 174 aaKnown RBP23.86■■□□□ 1.41
MMP28-201ENST00000605424 KLHL40Q2TBA0 621 aa23.86■■□□□ 1.41
MMP28-201ENST00000605424 GZF1Q9H116 711 aaPredicted RBP23.86■■□□□ 1.41
MMP28-201ENST00000605424 BCL9LQ86UU0 1499 aa23.85■■□□□ 1.41
MMP28-201ENST00000605424 BRD1O95696 1058 aa23.85■■□□□ 1.41
MMP28-201ENST00000605424 CYP19A1P11511 503 aaPredicted RBP23.85■■□□□ 1.41
MMP28-201ENST00000605424 PSMA5P28066 241 aa23.85■■□□□ 1.41
MMP28-201ENST00000605424 ZBTB38Q8NAP3 1195 aaPredicted RBP23.85■■□□□ 1.41
MMP28-201ENST00000605424 CYP46A1Q9Y6A2 500 aa23.85■■□□□ 1.41
MMP28-201ENST00000605424 NRAPQ86VF7 1730 aa23.85■■□□□ 1.41
MMP28-201ENST00000605424 A0A0D9SFI3 127 aa23.84■■□□□ 1.41
MMP28-201ENST00000605424 CASTP20810 708 aaKnown RBP23.84■■□□□ 1.41
MMP28-201ENST00000605424 KCNJ4P48050 445 aa23.84■■□□□ 1.41
MMP28-201ENST00000605424 AK2P54819 239 aa23.84■■□□□ 1.41
MMP28-201ENST00000605424 MEX3CQ5U5Q3 659 aaKnown RBP23.84■■□□□ 1.41
MMP28-201ENST00000605424 CREB3L3Q68CJ9 461 aa23.84■■□□□ 1.41
MMP28-201ENST00000605424 FNBP4Q8N3X1 1017 aaPredicted RBP23.84■■□□□ 1.41
MMP28-201ENST00000605424 ZSCAN31Q96LW9 406 aaPredicted RBP23.84■■□□□ 1.41
MMP28-201ENST00000605424 HMG20BQ9P0W2 317 aa23.84■■□□□ 1.41
MMP28-201ENST00000605424 CCDC57Q2TAC2 916 aa23.83■■□□□ 1.41
MMP28-201ENST00000605424 MCTP1Q6DN14 999 aa23.83■■□□□ 1.41
MMP28-201ENST00000605424 JAKMIP1Q96N16 626 aaKnown RBP23.83■■□□□ 1.41
MMP28-201ENST00000605424 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.83■■□□□ 1.41
MMP28-201ENST00000605424 CDHR2Q9BYE9 1310 aa23.83■■□□□ 1.41
MMP28-201ENST00000605424 TSGA10IPQ3SY00 556 aa23.82■■□□□ 1.4
MMP28-201ENST00000605424 NOL8Q76FK4 1167 aaKnown RBP23.82■■□□□ 1.4
MMP28-201ENST00000605424 RUFY3Q7L099 469 aa23.82■■□□□ 1.4
MMP28-201ENST00000605424 CSF1RP07333 972 aa23.82■■□□□ 1.4
MMP28-201ENST00000605424 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.82■■□□□ 1.4
MMP28-201ENST00000605424 SH2B1Q9NRF2 756 aaPredicted RBP23.82■■□□□ 1.4
MMP28-201ENST00000605424 PDRG1Q9NUG6 133 aa23.82■■□□□ 1.4
MMP28-201ENST00000605424 ZNF330Q9Y3S2 320 aaPredicted RBP23.82■■□□□ 1.4
MMP28-201ENST00000605424 ZNF609O15014 1411 aa23.81■■□□□ 1.4
MMP28-201ENST00000605424 SPATA31A1Q5TZJ5 1347 aa23.81■■□□□ 1.4
MMP28-201ENST00000605424 SLC27A2O14975 620 aa23.81■■□□□ 1.4
MMP28-201ENST00000605424 KBTBD3Q8NAB2 608 aa23.81■■□□□ 1.4
MMP28-201ENST00000605424 LMBRD1Q9NUN5 540 aa23.81■■□□□ 1.4
MMP28-201ENST00000605424 DDX49Q9Y6V7 483 aaKnown RBP23.81■■□□□ 1.4
MMP28-201ENST00000605424 PALLDQ8WX93 1383 aa23.81■■□□□ 1.4
MMP28-201ENST00000605424 RPAP1Q9BWH6 1393 aaPredicted RBP23.81■■□□□ 1.4
MMP28-201ENST00000605424 ERVV-1B6SEH8 477 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 USPL1Q5W0Q7 1092 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 ALDH8A1Q9H2A2 487 aaPredicted RBP23.8■■□□□ 1.4
MMP28-201ENST00000605424 AFF2P51816 1311 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 TAF5LO75529 589 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 IL6STP40189 918 aaPredicted RBP23.8■■□□□ 1.4
MMP28-201ENST00000605424 NEUROD6Q96NK8 337 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 SLC4A9Q96Q91 983 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 CEP126Q9P2H0 1117 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 AKAP2Q9Y2D5 859 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 NWD2Q9ULI1 1742 aa23.8■■□□□ 1.4
MMP28-201ENST00000605424 WDR33Q9C0J8 1336 aaKnown RBP23.79■■□□□ 1.4
MMP28-201ENST00000605424 MRE11P49959 708 aa23.79■■□□□ 1.4
MMP28-201ENST00000605424 ADCK5Q3MIX3 580 aa23.79■■□□□ 1.4
MMP28-201ENST00000605424 LRRC24Q50LG9 513 aa23.79■■□□□ 1.4
MMP28-201ENST00000605424 DNAJC2Q99543 621 aaKnown RBP23.79■■□□□ 1.4
MMP28-201ENST00000605424 SPEF2Q9C093 1822 aa23.79■■□□□ 1.4
MMP28-201ENST00000605424 MCMDC2Q4G0Z9 681 aa23.78■■□□□ 1.4
MMP28-201ENST00000605424 EDC3Q96F86 508 aaKnown RBP23.78■■□□□ 1.4
MMP28-201ENST00000605424 KRT32Q14532 448 aa23.78■■□□□ 1.4
MMP28-201ENST00000605424 NLRP10Q86W26 655 aa23.78■■□□□ 1.4
MMP28-201ENST00000605424 USP21Q9UK80 565 aa23.78■■□□□ 1.4
MMP28-201ENST00000605424 ANKRD36CQ5JPF3 1778 aa23.77■■□□□ 1.4
MMP28-201ENST00000605424 SH3TC1Q8TE82 1336 aa23.77■■□□□ 1.4
MMP28-201ENST00000605424 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.77■■□□□ 1.4
MMP28-201ENST00000605424 PRIM1P49642 420 aaKnown RBP23.77■■□□□ 1.4
MMP28-201ENST00000605424 TIMM10P62072 90 aa23.77■■□□□ 1.4
MMP28-201ENST00000605424 ANKRD1Q15327 319 aa23.77■■□□□ 1.4
MMP28-201ENST00000605424 DDB1Q16531 1140 aa23.77■■□□□ 1.4
MMP28-201ENST00000605424 ZNF589Q86UQ0 364 aaPredicted RBP23.77■■□□□ 1.4
MMP28-201ENST00000605424 ZNF594Q96JF6 807 aaPredicted RBP23.77■■□□□ 1.4
MMP28-201ENST00000605424 A0A1B0GUL7 405 aa23.76■■□□□ 1.39
MMP28-201ENST00000605424 IFIT5Q13325 482 aaKnown RBP23.76■■□□□ 1.39
MMP28-201ENST00000605424 SYTL4Q96C24 671 aaPredicted RBP23.76■■□□□ 1.39
MMP28-201ENST00000605424 FAM89AQ96GI7 184 aa23.76■■□□□ 1.39
MMP28-201ENST00000605424 HELLSQ9NRZ9 838 aa23.76■■□□□ 1.39
MMP28-201ENST00000605424 PAG1Q9NWQ8 432 aa23.76■■□□□ 1.39
MMP28-201ENST00000605424 U3KPZ7 1027 aaPredicted RBP23.76■■□□□ 1.39
MMP28-201ENST00000605424 DOT1LQ8TEK3 1739 aa23.76■■□□□ 1.39
MMP28-201ENST00000605424 PDIA4P13667 645 aaKnown RBP23.76■■□□□ 1.39
MMP28-201ENST00000605424 ZBTB1Q9Y2K1 713 aa23.75■■□□□ 1.39
MMP28-201ENST00000605424 HLFQ16534 295 aa23.74■■□□□ 1.39
MMP28-201ENST00000605424 BLOC1S2Q6QNY1 142 aa23.74■■□□□ 1.39
MMP28-201ENST00000605424 ARXQ96QS3 562 aa23.74■■□□□ 1.39
MMP28-201ENST00000605424 LRRFIP1Q32MZ4 808 aaKnown RBP23.74■■□□□ 1.39
MMP28-201ENST00000605424 TAF7LQ5H9L4 462 aa23.74■■□□□ 1.39
MMP28-201ENST00000605424 DDX46Q7L014 1031 aaKnown RBP23.74■■□□□ 1.39
MMP28-201ENST00000605424 PUS3Q9BZE2 481 aaKnown RBP23.74■■□□□ 1.39
MMP28-201ENST00000605424 SMC3Q9UQE7 1217 aa23.74■■□□□ 1.39
MMP28-201ENST00000605424 IFIT1P09914 478 aaKnown RBP23.73■■□□□ 1.39
MMP28-201ENST00000605424 XRCC6P12956 609 aaKnown RBP eCLIP23.73■■□□□ 1.39
MMP28-201ENST00000605424 CCDC158Q5M9N0 1113 aa23.73■■□□□ 1.39
MMP28-201ENST00000605424 BARGINQ6ZT62 677 aa23.73■■□□□ 1.39
MMP28-201ENST00000605424 BRPF3Q9ULD4 1205 aa23.73■■□□□ 1.39
MMP28-201ENST00000605424 SPATA31A5Q5VU36 1347 aa23.73■■□□□ 1.39
MMP28-201ENST00000605424 SPATA31A7Q8IWB4 1347 aa23.73■■□□□ 1.39
MMP28-201ENST00000605424 ABCC12Q96J65 1359 aa23.73■■□□□ 1.39
MMP28-201ENST00000605424 PRPF40AO75400 957 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms