RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 PPP1R42Q7Z4L9 355 aa7.56□□□□□ -1.2
FOCAD-213ENST00000604254 TSR2Q969E8 191 aaKnown RBP7.56□□□□□ -1.2
FOCAD-213ENST00000604254 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
FOCAD-213ENST00000604254 MASTLQ96GX5 879 aa7.56□□□□□ -1.2
FOCAD-213ENST00000604254 HYPKQ9NX55 129 aa7.56□□□□□ -1.2
FOCAD-213ENST00000604254 RNF181Q9P0P0 153 aa7.56□□□□□ -1.2
FOCAD-213ENST00000604254 IL16Q14005 1332 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 C21orf2O43822 256 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 NTSR2O95665 410 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 GOLGA2Q08379 1002 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 ERFEQ4G0M1 354 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 SOGA3Q5TF21 947 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 CCDC30Q5VVM6 783 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 SUSD4Q5VX71 490 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 PAXIP1Q6ZW49 1069 aaPredicted RBP7.55□□□□□ -1.2
FOCAD-213ENST00000604254 ZNF34Q8IZ26 560 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 EFCAB3Q8N7B9 438 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 C8orf58Q8NAV2 365 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 PLBD2Q8NHP8 589 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 RPGRQ92834 1020 aaKnown RBP7.55□□□□□ -1.2
FOCAD-213ENST00000604254 CHMP4AQ9BY43 222 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 NMRK2Q9NPI5 230 aa7.55□□□□□ -1.2
FOCAD-213ENST00000604254 FANCIQ9NVI1 1328 aa7.54□□□□□ -1.2
FOCAD-213ENST00000604254 MYH3P11055 1940 aa7.54□□□□□ -1.2
FOCAD-213ENST00000604254 LMNB1P20700 586 aa7.54□□□□□ -1.2
FOCAD-213ENST00000604254 ATN1P54259 1190 aaPredicted RBP7.54□□□□□ -1.2
FOCAD-213ENST00000604254 C16orf71Q8IYS4 520 aaPredicted RBP7.54□□□□□ -1.2
FOCAD-213ENST00000604254 UTP14AQ9BVJ6 771 aaKnown RBP7.54□□□□□ -1.2
FOCAD-213ENST00000604254 STK31Q9BXU1 1019 aa7.54□□□□□ -1.2
FOCAD-213ENST00000604254 KDM2BQ8NHM5 1336 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 SPEF2Q9C093 1822 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 KLRG2A4D1S0 409 aaPredicted RBP7.53□□□□□ -1.2
FOCAD-213ENST00000604254 NFKBIEO00221 500 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 DDX58O95786 925 aaKnown RBP7.53□□□□□ -1.2
FOCAD-213ENST00000604254 ALDH1B1P30837 517 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 HTRA3P83110 453 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 PLCB2Q00722 1185 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 TCIRG1Q13488 830 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 TWISTNBQ3B726 338 aaPredicted RBP7.53□□□□□ -1.2
FOCAD-213ENST00000604254 CRY2Q49AN0 593 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 CCDC93Q567U6 631 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 RIC3Q7Z5B4 369 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 NLRP10Q86W26 655 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 WDR63Q8IWG1 891 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 TSPYL6Q8N831 410 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 TAOK3Q9H2K8 898 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 MYH16Q9H6N6 1097 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 TRMT112Q9UI30 125 aaKnown RBP7.53□□□□□ -1.2
FOCAD-213ENST00000604254 TAF1P21675 1872 aa7.53□□□□□ -1.2
FOCAD-213ENST00000604254 SH3TC1Q8TE82 1336 aa7.52□□□□□ -1.2
FOCAD-213ENST00000604254 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.2
FOCAD-213ENST00000604254 ZC3H4Q9UPT8 1303 aaKnown RBP7.52□□□□□ -1.2
FOCAD-213ENST00000604254 LRRC37AA6NMS7 1700 aa7.52□□□□□ -1.2
FOCAD-213ENST00000604254 ATP5J2-PTCD1G3V325 749 aa7.52□□□□□ -1.21
FOCAD-213ENST00000604254 ATMINO43313 823 aaPredicted RBP7.52□□□□□ -1.21
FOCAD-213ENST00000604254 HSPA1AP0DMV8 641 aaKnown RBP7.52□□□□□ -1.21
FOCAD-213ENST00000604254 HSPA1BP0DMV9 641 aaKnown RBP7.52□□□□□ -1.21
FOCAD-213ENST00000604254 SMC1BQ8NDV3 1235 aa7.52□□□□□ -1.21
FOCAD-213ENST00000604254 ZNF428Q96B54 188 aa7.52□□□□□ -1.21
FOCAD-213ENST00000604254 RBM17Q96I25 401 aaKnown RBP7.52□□□□□ -1.21
FOCAD-213ENST00000604254 NLRP3Q96P20 1036 aa7.52□□□□□ -1.21
FOCAD-213ENST00000604254 MFRPQ9BY79 579 aa7.52□□□□□ -1.21
FOCAD-213ENST00000604254 PHAXQ9H814 394 aaKnown RBP7.52□□□□□ -1.21
FOCAD-213ENST00000604254 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.52□□□□□ -1.21
FOCAD-213ENST00000604254 TCERG1O14776 1098 aaKnown RBP7.51□□□□□ -1.21
FOCAD-213ENST00000604254 PPEF1O14829 653 aaPredicted RBP7.51□□□□□ -1.21
FOCAD-213ENST00000604254 GTPBP6O43824 516 aaPredicted RBP7.51□□□□□ -1.21
FOCAD-213ENST00000604254 POTEIP0CG38 1075 aa7.51□□□□□ -1.21
FOCAD-213ENST00000604254 CLCN6P51797 869 aa7.51□□□□□ -1.21
FOCAD-213ENST00000604254 MYD88Q99836 296 aa7.51□□□□□ -1.21
FOCAD-213ENST00000604254 TMX4Q9H1E5 349 aaPredicted RBP7.51□□□□□ -1.21
FOCAD-213ENST00000604254 PRDM10Q9NQV6 1147 aa7.51□□□□□ -1.21
FOCAD-213ENST00000604254 CCER2I3L3R5 266 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 HCLS1P14317 486 aaPredicted RBP7.5□□□□□ -1.21
FOCAD-213ENST00000604254 HOXA10P31260 410 aaPredicted RBP7.5□□□□□ -1.21
FOCAD-213ENST00000604254 FKBP4Q02790 459 aaKnown RBP eCLIP7.5□□□□□ -1.21
FOCAD-213ENST00000604254 EXOSC9Q06265 439 aaKnown RBP7.5□□□□□ -1.21
FOCAD-213ENST00000604254 NEXNQ0ZGT2 675 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 RTL5Q5HYW3 569 aaPredicted RBP7.5□□□□□ -1.21
FOCAD-213ENST00000604254 ASTLQ6HA08 431 aaPredicted RBP7.5□□□□□ -1.21
FOCAD-213ENST00000604254 C3orf67Q6ZVT6 689 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 DDX46Q7L014 1031 aaKnown RBP7.5□□□□□ -1.21
FOCAD-213ENST00000604254 RTKN2Q8IZC4 609 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 FAM89AQ96GI7 184 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 CRAMP1Q96RY5 1269 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 ISCA1Q9BUE6 129 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 RRAGCQ9HB90 399 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 MAP3K2Q9Y2U5 619 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 ABCC4O15439 1325 aa7.5□□□□□ -1.21
FOCAD-213ENST00000604254 SLC10A5Q5PT55 438 aa7.49□□□□□ -1.21
FOCAD-213ENST00000604254 CC2D2BQ6DHV5 1058 aa7.49□□□□□ -1.21
FOCAD-213ENST00000604254 OLFM4Q6UX06 510 aa7.49□□□□□ -1.21
FOCAD-213ENST00000604254 SYNE4Q8N205 404 aa7.49□□□□□ -1.21
FOCAD-213ENST00000604254 C7orf43Q8WVR3 580 aa7.49□□□□□ -1.21
FOCAD-213ENST00000604254 METTL22Q9BUU2 404 aaPredicted RBP7.49□□□□□ -1.21
FOCAD-213ENST00000604254 ZNF277Q9NRM2 450 aaPredicted RBP7.49□□□□□ -1.21
FOCAD-213ENST00000604254 CWC25Q9NXE8 425 aaPredicted RBP7.49□□□□□ -1.21
FOCAD-213ENST00000604254 SCN4AP35499 1836 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms