RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 COL4A1P02462 1669 aa22.13■■□□□ 1.13
CCDC12-210ENST00000604181 YDJCA8MPS7 323 aa22.12■■□□□ 1.13
CCDC12-210ENST00000604181 RAD17O75943 681 aa22.12■■□□□ 1.13
CCDC12-210ENST00000604181 KIAA2012Q0VF49 1180 aa22.12■■□□□ 1.13
CCDC12-210ENST00000604181 MPNDQ8N594 471 aa22.12■■□□□ 1.13
CCDC12-210ENST00000604181 TRPM4Q8TD43 1214 aa22.12■■□□□ 1.13
CCDC12-210ENST00000604181 ABHD8Q96I13 439 aa22.12■■□□□ 1.13
CCDC12-210ENST00000604181 VPS33BQ9H267 617 aa22.12■■□□□ 1.13
CCDC12-210ENST00000604181 BBOX1O75936 387 aa22.11■■□□□ 1.13
CCDC12-210ENST00000604181 TCIRG1Q13488 830 aa22.11■■□□□ 1.13
CCDC12-210ENST00000604181 TSKSQ9UJT2 592 aa22.11■■□□□ 1.13
CCDC12-210ENST00000604181 GRAPQ13588 217 aa22.1■■□□□ 1.13
CCDC12-210ENST00000604181 CIAPIN1Q6FI81 312 aa22.1■■□□□ 1.13
CCDC12-210ENST00000604181 SUPT20HQ8NEM7 779 aa22.1■■□□□ 1.13
CCDC12-210ENST00000604181 GRAPLQ8TC17 118 aaPredicted RBP22.1■■□□□ 1.13
CCDC12-210ENST00000604181 BABAM1Q9NWV8 329 aa22.1■■□□□ 1.13
CCDC12-210ENST00000604181 TRMT112Q9UI30 125 aaKnown RBP22.1■■□□□ 1.13
CCDC12-210ENST00000604181 DDX60Q8IY21 1712 aaKnown RBP22.09■■□□□ 1.13
CCDC12-210ENST00000604181 CELF2O95319 508 aaKnown RBP22.09■■□□□ 1.13
CCDC12-210ENST00000604181 ECE1P42892 770 aa22.09■■□□□ 1.13
CCDC12-210ENST00000604181 DLK2Q6UY11 383 aa22.09■■□□□ 1.13
CCDC12-210ENST00000604181 SAPCD2Q86UD0 394 aa22.09■■□□□ 1.13
CCDC12-210ENST00000604181 CCDC146Q8IYE0 955 aa22.09■■□□□ 1.13
CCDC12-210ENST00000604181 TMX4Q9H1E5 349 aaPredicted RBP22.09■■□□□ 1.13
CCDC12-210ENST00000604181 PGAP2Q9UHJ9 254 aa22.09■■□□□ 1.13
CCDC12-210ENST00000604181 SH3TC1Q8TE82 1336 aa22.08■■□□□ 1.13
CCDC12-210ENST00000604181 NEUROD2Q15784 382 aa22.08■■□□□ 1.13
CCDC12-210ENST00000604181 HSP90AB3PQ58FF7 597 aa22.08■■□□□ 1.13
CCDC12-210ENST00000604181 DDX46Q7L014 1031 aaKnown RBP22.08■■□□□ 1.13
CCDC12-210ENST00000604181 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
CCDC12-210ENST00000604181 LRRC37AA6NMS7 1700 aa22.08■■□□□ 1.12
CCDC12-210ENST00000604181 CHL1O00533 1208 aa22.07■■□□□ 1.12
CCDC12-210ENST00000604181 BCL2L13Q9BXK5 485 aa22.06■■□□□ 1.12
CCDC12-210ENST00000604181 TRIM35Q9UPQ4 493 aa22.06■■□□□ 1.12
CCDC12-210ENST00000604181 CELF1Q92879 486 aaKnown RBP22.05■■□□□ 1.12
CCDC12-210ENST00000604181 CNOT7Q9UIV1 285 aaKnown RBP22.05■■□□□ 1.12
CCDC12-210ENST00000604181 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
CCDC12-210ENST00000604181 LMOD3Q0VAK6 560 aa22.04■■□□□ 1.12
CCDC12-210ENST00000604181 FAM89AQ96GI7 184 aa22.04■■□□□ 1.12
CCDC12-210ENST00000604181 ZIC5Q96T25 663 aa22.04■■□□□ 1.12
CCDC12-210ENST00000604181 ZNF408Q9H9D4 720 aa22.04■■□□□ 1.12
CCDC12-210ENST00000604181 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
CCDC12-210ENST00000604181 CDHR2Q9BYE9 1310 aa22.04■■□□□ 1.12
CCDC12-210ENST00000604181 CASP8AP2Q9UKL3 1982 aa22.03■■□□□ 1.12
CCDC12-210ENST00000604181 ATP5J2-PTCD1G3V325 749 aa22.03■■□□□ 1.12
CCDC12-210ENST00000604181 EGFRP00533 1210 aa22.03■■□□□ 1.12
CCDC12-210ENST00000604181 MAP2K2P36507 400 aa22.03■■□□□ 1.12
CCDC12-210ENST00000604181 TNIP1Q15025 636 aa22.03■■□□□ 1.12
CCDC12-210ENST00000604181 ISCA1Q9BUE6 129 aa22.03■■□□□ 1.12
CCDC12-210ENST00000604181 POLR2AP24928 1970 aaKnown RBP22.02■■□□□ 1.12
CCDC12-210ENST00000604181 RALBP1Q15311 655 aa22.02■■□□□ 1.12
CCDC12-210ENST00000604181 MICALL2Q8IY33 904 aa22.02■■□□□ 1.12
CCDC12-210ENST00000604181 PLBD2Q8NHP8 589 aa22.02■■□□□ 1.12
CCDC12-210ENST00000604181 ZC3H15Q8WU90 426 aaKnown RBP22.02■■□□□ 1.12
CCDC12-210ENST00000604181 BEGAINQ9BUH8 593 aa22.02■■□□□ 1.12
CCDC12-210ENST00000604181 DBNDD1Q9H9R9 158 aa22.02■■□□□ 1.12
CCDC12-210ENST00000604181 KCNQ5Q9NR82 932 aa22.02■■□□□ 1.12
CCDC12-210ENST00000604181 PSMD14O00487 310 aa22.01■■□□□ 1.11
CCDC12-210ENST00000604181 FAM161AQ3B820 660 aa22.01■■□□□ 1.11
CCDC12-210ENST00000604181 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-210ENST00000604181 HDGFL1Q5TGJ6 251 aa22.01■■□□□ 1.11
CCDC12-210ENST00000604181 SAMD7Q7Z3H4 446 aa22.01■■□□□ 1.11
CCDC12-210ENST00000604181 POLLQ9UGP5 575 aa22.01■■□□□ 1.11
CCDC12-210ENST00000604181 GPSM2P81274 684 aa22■■□□□ 1.11
CCDC12-210ENST00000604181 SF3B3Q15393 1217 aaKnown RBP22■■□□□ 1.11
CCDC12-210ENST00000604181 CDC37L1Q7L3B6 337 aa22■■□□□ 1.11
CCDC12-210ENST00000604181 USP48Q86UV5 1035 aa22■■□□□ 1.11
CCDC12-210ENST00000604181 RTL9Q8NET4 1388 aa21.99■■□□□ 1.11
CCDC12-210ENST00000604181 RIMBP2O15034 1052 aa21.99■■□□□ 1.11
CCDC12-210ENST00000604181 ANKRD13DQ6ZTN6 518 aa21.99■■□□□ 1.11
CCDC12-210ENST00000604181 HHIPL1Q96JK4 782 aa21.99■■□□□ 1.11
CCDC12-210ENST00000604181 NSFL1CQ9UNZ2 370 aaKnown RBP21.99■■□□□ 1.11
CCDC12-210ENST00000604181 SCN9AQ15858 1988 aa21.99■■□□□ 1.11
CCDC12-210ENST00000604181 CCDC85CA6NKD9 419 aa21.98■■□□□ 1.11
CCDC12-210ENST00000604181 H7C1D1 291 aa21.98■■□□□ 1.11
CCDC12-210ENST00000604181 WASHC4Q2M389 1173 aa21.98■■□□□ 1.11
CCDC12-210ENST00000604181 TBC1D10BQ4KMP7 808 aaPredicted RBP21.98■■□□□ 1.11
CCDC12-210ENST00000604181 TMC4Q7Z404 712 aa21.98■■□□□ 1.11
CCDC12-210ENST00000604181 BRPF1P55201 1214 aaPredicted RBP21.97■■□□□ 1.11
CCDC12-210ENST00000604181 DOK7Q18PE1 504 aa21.97■■□□□ 1.11
CCDC12-210ENST00000604181 DPF2Q92785 391 aa21.97■■□□□ 1.11
CCDC12-210ENST00000604181 C6orf229H3BNL8 230 aa21.96■■□□□ 1.11
CCDC12-210ENST00000604181 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
CCDC12-210ENST00000604181 MYBBP1AQ9BQG0 1328 aaKnown RBP21.96■■□□□ 1.11
CCDC12-210ENST00000604181 ADM5C9JUS6 153 aa21.95■■□□□ 1.1
CCDC12-210ENST00000604181 IRS4O14654 1257 aaPredicted RBP21.95■■□□□ 1.1
CCDC12-210ENST00000604181 ECE2O60344 883 aa21.95■■□□□ 1.1
CCDC12-210ENST00000604181 HOXB7P09629 217 aa21.95■■□□□ 1.1
CCDC12-210ENST00000604181 HUNKP57058 714 aa21.95■■□□□ 1.1
CCDC12-210ENST00000604181 DUSP27Q5VZP5 1158 aa21.95■■□□□ 1.1
CCDC12-210ENST00000604181 DBF4Q9UBU7 674 aaPredicted RBP21.95■■□□□ 1.1
CCDC12-210ENST00000604181 ADAMTS8Q9UP79 889 aa21.95■■□□□ 1.1
CCDC12-210ENST00000604181 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
CCDC12-210ENST00000604181 TBC1D16Q8TBP0 767 aa21.94■■□□□ 1.1
CCDC12-210ENST00000604181 MCOLN1Q9GZU1 580 aa21.94■■□□□ 1.1
CCDC12-210ENST00000604181 SEC31BQ9NQW1 1179 aa21.94■■□□□ 1.1
CCDC12-210ENST00000604181 ASTN2O75129 1339 aaPredicted RBP21.94■■□□□ 1.1
CCDC12-210ENST00000604181 FAM155AB1AL88 458 aaPredicted RBP21.93■■□□□ 1.1
CCDC12-210ENST00000604181 TRIM28Q13263 835 aaKnown RBP21.93■■□□□ 1.1
CCDC12-210ENST00000604181 RBM26Q5T8P6 1007 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms