RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 HCLS1P14317 486 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1P1-201ENST00000603451 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
SQSTM1P1-201ENST00000603451 CHD4Q14839 1912 aa11.92□□□□□ -0.5
SQSTM1P1-201ENST00000603451 BBOX1O75936 387 aa11.92□□□□□ -0.5
SQSTM1P1-201ENST00000603451 CSF1RP07333 972 aa11.92□□□□□ -0.5
SQSTM1P1-201ENST00000603451 UBTFL1P0CB47 393 aaPredicted RBP11.92□□□□□ -0.5
SQSTM1P1-201ENST00000603451 CHRNA5P30532 468 aa11.92□□□□□ -0.5
SQSTM1P1-201ENST00000603451 RABL6Q3YEC7 729 aaPredicted RBP11.92□□□□□ -0.5
SQSTM1P1-201ENST00000603451 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
SQSTM1P1-201ENST00000603451 USP44Q9H0E7 712 aa11.92□□□□□ -0.5
SQSTM1P1-201ENST00000603451 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 LTBP3Q9NS15 1303 aa11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 GRAPQ13588 217 aa11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 TTLL11Q8NHH1 800 aa11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 ZNF622Q969S3 477 aaKnown RBP eCLIP11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
SQSTM1P1-201ENST00000603451 NBPF7P0C2Y1 421 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 C3orf67Q6ZVT6 689 aa11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 SYNE4Q8N205 404 aa11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 TMEM57Q8N5G2 664 aa11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 SNED1Q8TER0 1413 aa11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 TMX4Q9H1E5 349 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 BCS1LQ9Y276 419 aa11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 SPEF2Q9C093 1822 aa11.9□□□□□ -0.5
SQSTM1P1-201ENST00000603451 A0A1B0GUL6 1792 aa11.9□□□□□ -0.51
SQSTM1P1-201ENST00000603451 PPEF1O14829 653 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 RRP1P56182 461 aaKnown RBP11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 FOXO4P98177 505 aa11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 MTX1Q13505 466 aa11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 MVPQ14764 893 aaKnown RBP11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 GPR162Q16538 588 aa11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 CCDC93Q567U6 631 aa11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 ITPRIPQ8IWB1 547 aa11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 C7orf43Q8WVR3 580 aa11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 DICER1Q9UPY3 1922 aaKnown RBP11.89□□□□□ -0.51
SQSTM1P1-201ENST00000603451 IFIT5Q13325 482 aaKnown RBP11.88□□□□□ -0.51
SQSTM1P1-201ENST00000603451 AAMPQ13685 434 aa11.88□□□□□ -0.51
SQSTM1P1-201ENST00000603451 RTKN2Q8IZC4 609 aa11.88□□□□□ -0.51
SQSTM1P1-201ENST00000603451 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
SQSTM1P1-201ENST00000603451 ATP6V0A2Q9Y487 856 aa11.88□□□□□ -0.51
SQSTM1P1-201ENST00000603451 SBF1O95248 1867 aa11.88□□□□□ -0.51
SQSTM1P1-201ENST00000603451 TAF1P21675 1872 aa11.88□□□□□ -0.51
SQSTM1P1-201ENST00000603451 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 GNAI2P04899 355 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 RLBP1P12271 317 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 YBX3P16989 372 aaKnown RBP eCLIP11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 ITGA6P23229 1130 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 RPS8P62241 208 aaKnown RBP11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 CCDC57Q2TAC2 916 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 LMBR1LQ6UX01 489 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 ANKRD18AQ8IVF6 992 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 KAZALD1Q96I82 304 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 SUCLG2Q96I99 432 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 PSMD1Q99460 953 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 MEIS3Q99687 375 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
SQSTM1P1-201ENST00000603451 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
SQSTM1P1-201ENST00000603451 IGHMBP2P38935 993 aaKnown RBP11.86□□□□□ -0.51
SQSTM1P1-201ENST00000603451 FAM161AQ3B820 660 aa11.86□□□□□ -0.51
SQSTM1P1-201ENST00000603451 ANKRD44Q8N8A2 993 aa11.86□□□□□ -0.51
SQSTM1P1-201ENST00000603451 GREM2Q9H772 168 aa11.86□□□□□ -0.51
SQSTM1P1-201ENST00000603451 BSDC1Q9NW68 430 aaPredicted RBP11.86□□□□□ -0.51
SQSTM1P1-201ENST00000603451 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
SQSTM1P1-201ENST00000603451 COL4A1P02462 1669 aa11.85□□□□□ -0.51
SQSTM1P1-201ENST00000603451 ZBTB7BO15156 539 aaPredicted RBP11.85□□□□□ -0.51
SQSTM1P1-201ENST00000603451 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
SQSTM1P1-201ENST00000603451 PANK1Q8TE04 598 aa11.85□□□□□ -0.51
SQSTM1P1-201ENST00000603451 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
SQSTM1P1-201ENST00000603451 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
SQSTM1P1-201ENST00000603451 C21orf2O43822 256 aa11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 FKBP4Q02790 459 aaKnown RBP eCLIP11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 MPHOSPH8Q99549 860 aa11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 RTFDC1Q9BY42 306 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 TAOK3Q9H2K8 898 aa11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 XDHP47989 1333 aa11.84□□□□□ -0.51
SQSTM1P1-201ENST00000603451 CCDC88AQ3V6T2 1871 aa11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 PLIN1O60240 522 aa11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 TAF7LQ5H9L4 462 aa11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 ANKRD2Q9GZV1 360 aa11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 COG6Q9Y2V7 657 aa11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 CHMP3Q9Y3E7 222 aa11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 GOLGB1Q14789 3259 aaKnown RBP11.83□□□□□ -0.52
SQSTM1P1-201ENST00000603451 NFKBIEO00221 500 aa11.82□□□□□ -0.52
SQSTM1P1-201ENST00000603451 CIAO1O76071 339 aa11.82□□□□□ -0.52
SQSTM1P1-201ENST00000603451 LMNB1P20700 586 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms