RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MAGEC3Q8TD91 643 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 RTF1Q92541 710 aaKnown RBP10.26□□□□□ -0.77
COMMD3-215ENST00000602574 JPH2Q9BR39 696 aaPredicted RBP10.26□□□□□ -0.77
COMMD3-215ENST00000602574 STK31Q9BXU1 1019 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 RETREG1Q9H6L5 497 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 SPATA7Q9P0W8 599 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 BARX2Q9UMQ3 279 aaPredicted RBP10.26□□□□□ -0.77
COMMD3-215ENST00000602574 EXOC6BQ9Y2D4 811 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 LAMB3Q13751 1172 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 PKN1Q16512 942 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 MAMSTRQ6ZN01 415 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 STAG2Q8N3U4 1231 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 DTNBP1Q96EV8 351 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 L2HGDHQ9H9P8 463 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 ATP1B4Q9UN42 357 aaPredicted RBP10.26□□□□□ -0.77
COMMD3-215ENST00000602574 ATP8A1Q9Y2Q0 1164 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 ATP10AO60312 1499 aa10.26□□□□□ -0.77
COMMD3-215ENST00000602574 PLXNC1O60486 1568 aa10.25□□□□□ -0.77
COMMD3-215ENST00000602574 LAMC3Q9Y6N6 1575 aa10.25□□□□□ -0.77
COMMD3-215ENST00000602574 SASH1O94885 1247 aa10.25□□□□□ -0.77
COMMD3-215ENST00000602574 SMC1AQ14683 1233 aaKnown RBP10.25□□□□□ -0.77
COMMD3-215ENST00000602574 B4GALNT2Q8NHY0 566 aa10.25□□□□□ -0.77
COMMD3-215ENST00000602574 ZKSCAN4Q969J2 545 aaPredicted RBP10.25□□□□□ -0.77
COMMD3-215ENST00000602574 OSBPL9Q96SU4 736 aa10.25□□□□□ -0.77
COMMD3-215ENST00000602574 KIF9Q9HAQ2 790 aa10.25□□□□□ -0.77
COMMD3-215ENST00000602574 INCENPQ9NQS7 918 aa10.25□□□□□ -0.77
COMMD3-215ENST00000602574 CCDC175P0C221 793 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 STIP1P31948 543 aaKnown RBP10.24□□□□□ -0.77
COMMD3-215ENST00000602574 OTUD6AQ7L8S5 288 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 BRAPQ7Z569 592 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 AMOTL1Q8IY63 956 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 MMADHCQ9H3L0 296 aaPredicted RBP10.24□□□□□ -0.77
COMMD3-215ENST00000602574 MAGEC2Q9UBF1 373 aaPredicted RBP10.24□□□□□ -0.77
COMMD3-215ENST00000602574 ABCC5O15440 1437 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 CAMSAP2Q08AD1 1489 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 SHANK2Q9UPX8 1470 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 TPPPO94811 219 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 YY1P25490 414 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 ZBED6P86452 979 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 EIF2AK4Q9P2K8 1649 aaKnown RBP10.24□□□□□ -0.77
COMMD3-215ENST00000602574 IQGAP2Q13576 1575 aa10.24□□□□□ -0.77
COMMD3-215ENST00000602574 IGHDP01880 384 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 GCLCP48506 637 aaPredicted RBP10.23□□□□□ -0.77
COMMD3-215ENST00000602574 MCCD1P59942 119 aaPredicted RBP10.23□□□□□ -0.77
COMMD3-215ENST00000602574 RRP12Q5JTH9 1297 aaKnown RBP10.23□□□□□ -0.77
COMMD3-215ENST00000602574 NYAP1Q6ZVC0 841 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 ZFAND2BQ8WV99 257 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 AGBL1Q96MI9 1066 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 CCDC85AQ96PX6 553 aaPredicted RBP10.23□□□□□ -0.77
COMMD3-215ENST00000602574 TSPYL2Q9H2G4 693 aaPredicted RBP10.23□□□□□ -0.77
COMMD3-215ENST00000602574 RRP7BPQ9NSQ0 103 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
COMMD3-215ENST00000602574 SLC27A2O14975 620 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 CLNS1AP54105 237 aaKnown RBP10.23□□□□□ -0.77
COMMD3-215ENST00000602574 PDE3AQ14432 1141 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 POSTNQ15063 836 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 SOGA3Q5TF21 947 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 TLDC1Q6P9B6 456 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 MICALCLQ6ZW33 695 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 ARHGAP22Q7Z5H3 698 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 FAM114A1Q8IWE2 563 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 C16orf45Q96MC5 204 aaPredicted RBP10.23□□□□□ -0.77
COMMD3-215ENST00000602574 TRAIPQ9BWF2 469 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 ATP6V0A4Q9HBG4 840 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 WDR37Q9Y2I8 494 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 PPME1Q9Y570 386 aa10.23□□□□□ -0.77
COMMD3-215ENST00000602574 KBTBD12Q3ZCT8 623 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 PLEKHO1Q53GL0 409 aaPredicted RBP10.22□□□□□ -0.77
COMMD3-215ENST00000602574 CWF19L1Q69YN2 538 aaKnown RBP10.22□□□□□ -0.77
COMMD3-215ENST00000602574 CWC27Q6UX04 472 aaKnown RBP10.22□□□□□ -0.77
COMMD3-215ENST00000602574 KCNN1Q92952 543 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 EVI5LQ96CN4 794 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 XAGE2Q96GT9 111 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 FAM81BQ96LP2 452 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 TSGA10Q9BZW7 698 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 PLB1Q6P1J6 1458 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 TRPM1Q7Z4N2 1603 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 ERC2O15083 957 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 COPB2P35606 906 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 JAKMIP2Q96AA8 810 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 ZBTB10Q96DT7 871 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 JADE2Q9NQC1 790 aa10.22□□□□□ -0.77
COMMD3-215ENST00000602574 PRDM15P57071 1507 aaPredicted RBP10.21□□□□□ -0.77
COMMD3-215ENST00000602574 MAP3K5Q99683 1374 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 GOLGA6L10A6NI86 522 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 NEMFO60524 1076 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 ROR2Q01974 943 aaKnown RBP10.21□□□□□ -0.77
COMMD3-215ENST00000602574 SNX1Q13596 522 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 ZNF394Q53GI3 561 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 MYSM1Q5VVJ2 828 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.21□□□□□ -0.77
COMMD3-215ENST00000602574 CATIPQ7Z7H3 387 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 CCDC170Q8IYT3 715 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 TMX3Q96JJ7 454 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 DHRS1Q96LJ7 313 aa10.21□□□□□ -0.77
COMMD3-215ENST00000602574 REREQ9P2R6 1566 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 KRT38O76015 456 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 TBC1D8O95759 1140 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 CYP11B2P19099 503 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms