RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	CCDC102B	Q68D86	513 aa		13.94	□□□□□ -0.18
PTPN23-206	ENST00000602307	CRACR2A	Q9BSW2	395 aa		13.94	□□□□□ -0.18
PTPN23-206	ENST00000602307	MTIF2	P46199	727 aa	Known RBP	13.94	□□□□□ -0.18
PTPN23-206	ENST00000602307	HSP90AA4P	Q58FG1	418 aa		13.94	□□□□□ -0.18
PTPN23-206	ENST00000602307	AKAP4	Q5JQC9	854 aa		13.94	□□□□□ -0.18
PTPN23-206	ENST00000602307	TCP11L1	Q9NUJ3	509 aa		13.94	□□□□□ -0.18
PTPN23-206	ENST00000602307	ASXL2	Q76L83	1435 aa		13.94	□□□□□ -0.18
PTPN23-206	ENST00000602307	ABCC2	Q92887	1545 aa		13.94	□□□□□ -0.18
PTPN23-206	ENST00000602307	ALDH1L1	O75891	902 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	LDHC	P07864	332 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	KIF5B	P33176	963 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	POLR3A	O14802	1390 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	ZNF830	Q96NB3	372 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	NBPF6	Q5VWK0	638 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	CEP85	Q6P2H3	762 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	USP48	Q86UV5	1035 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	SLF2	Q8IX21	1173 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	NBPF4	Q96M43	638 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	BAG3	O95817	575 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	UQCRFS1P1	P0C7P4	283 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	CYP7A1	P22680	504 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	SLC9C2	Q5TAH2	1124 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	WDR78	Q5VTH9	848 aa		13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	KRI1	Q8N9T8	703 aa	Known RBP	13.93	□□□□□ -0.18
PTPN23-206	ENST00000602307	NMI	Q13287	307 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	WTAP	Q15007	396 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	MCMDC2	Q4G0Z9	681 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307		Q6ZUG5	572 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	EYA1	Q99502	592 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	DCTPP1	Q9H773	170 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	ZBTB43	O43298	467 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	CLCN1	P35523	988 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	CUL5	Q93034	780 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	ZBTB40	Q9NUA8	1239 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	DMRT2	Q9Y5R5	561 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	DCAF8L1	A6NGE4	600 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	RFC4	P35249	363 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	CCDC152	Q4G0S7	254 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	TCERG1L	Q5VWI1	586 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	JAKMIP3	Q5VZ66	844 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	CHST3	Q7LGC8	479 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	DNM1	Q05193	864 aa	Known RBP	13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	LINS1	Q8NG48	757 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	ALG1	Q9BT22	464 aa		13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN23-206	ENST00000602307	YEATS4	O95619	227 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	LIG1	P18858	919 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	HELB	Q8NG08	1087 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	SLC4A4	Q9Y6R1	1079 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	A2M	P01023	1474 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	SYK	P43405	635 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	UHRF1BP1L	A0JNW5	1464 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	IL15	P40933	162 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	LRSAM1	Q6UWE0	723 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	CALML4	Q96GE6	196 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	DACT1	Q9NYF0	836 aa		13.91	□□□□□ -0.18
PTPN23-206	ENST00000602307	MARCKS	P29966	332 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	SBNO2	Q9Y2G9	1366 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	ZFY	P08048	801 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	ATP6V1A	P38606	617 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	AFM	P43652	599 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	RBM25	P49756	843 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	GSDMD	P57764	484 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	VPS36	Q86VN1	386 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	FEZ1	Q99689	392 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	ANAPC15	P60006	121 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	LUZP1	Q86V48	1076 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	4e-8	■□□□□ 9.7
PTPN23-206	ENST00000602307	SCLT1	Q96NL6	688 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	ZSWIM4	Q9H7M6	989 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	FGFR1OP	O95684	399 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	CCDC40	Q4G0X9	1142 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	ANKRD18A	Q8IVF6	992 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	ZGPAT	Q8N5A5	531 aa	Known RBP	13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	RIMS2	Q9UQ26	1411 aa		13.9	□□□□□ -0.18
PTPN23-206	ENST00000602307	PLEKHM2	Q8IWE5	1019 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	PLCD4	Q9BRC7	762 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	GBP3	Q9H0R5	595 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	CCDC178	Q5BJE1	867 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	SNX21	Q969T3	373 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	MACROD2	A1Z1Q3	448 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	NEMF	O60524	1076 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	USO1	O60763	962 aa	Known RBP	13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	PRIM1	P49642	420 aa	Known RBP	13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	ANO6	Q4KMQ2	910 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	SMC5	Q8IY18	1101 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	MAST1	Q9Y2H9	1570 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307		F8W031	263 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	POTEJ	P0CG39	1038 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	CCDC113	Q9H0I3	377 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	KAT6B	Q8WYB5	2073 aa		13.89	□□□□□ -0.19
PTPN23-206	ENST00000602307	N4BP3	O15049	544 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	POLR3G	O15318	223 aa	Predicted RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms