RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 KDM4AO75164 1064 aa13.77□□□□□ -0.2
ARHGEF1-220ENST00000600274 WASHC4Q2M389 1173 aa13.77□□□□□ -0.2
ARHGEF1-220ENST00000600274 DNTTIP2Q5QJE6 756 aaKnown RBP13.77□□□□□ -0.2
ARHGEF1-220ENST00000600274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.2
ARHGEF1-220ENST00000600274 CEBPZQ03701 1054 aaKnown RBP13.77□□□□□ -0.21
ARHGEF1-220ENST00000600274 LARP1BQ659C4 914 aaKnown RBP13.77□□□□□ -0.21
ARHGEF1-220ENST00000600274 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.21
ARHGEF1-220ENST00000600274 DNM1Q05193 864 aaKnown RBP13.77□□□□□ -0.21
ARHGEF1-220ENST00000600274 CCDC57Q2TAC2 916 aa13.77□□□□□ -0.21
ARHGEF1-220ENST00000600274 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
ARHGEF1-220ENST00000600274 SLIT3O75094 1523 aa13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 NUTM2BA6NNL0 878 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 NUTM2EB1AL46 878 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 HIP1O00291 1037 aa13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 NUTM2AQ8IVF1 878 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 INTS4Q96HW7 963 aaKnown RBP13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 TBC1D2BQ9UPU7 963 aa13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 TFIP11Q9UBB9 837 aaKnown RBP13.76□□□□□ -0.21
ARHGEF1-220ENST00000600274 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 IFIT1P09914 478 aaKnown RBP13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 ZSCAN22P10073 491 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 HAND2P61296 217 aa13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 ACSBG1Q96GR2 724 aa13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 TTC14Q96N46 770 aa13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 PSMA5P28066 241 aa13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 COPRSQ9NQ92 184 aa13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 R3HCC1Q9Y3T6 440 aaKnown RBP13.75□□□□□ -0.21
ARHGEF1-220ENST00000600274 NECTIN1Q15223 517 aa13.74□□□□□ -0.21
ARHGEF1-220ENST00000600274 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
ARHGEF1-220ENST00000600274 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
ARHGEF1-220ENST00000600274 CEP126Q9P2H0 1117 aa13.74□□□□□ -0.21
ARHGEF1-220ENST00000600274 MBD3O95983 291 aa13.74□□□□□ -0.21
ARHGEF1-220ENST00000600274 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
ARHGEF1-220ENST00000600274 ERBB4Q15303 1308 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 RFX5P48382 616 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 CCT2P78371 535 aaKnown RBP13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 LRP10Q7Z4F1 713 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 MAP4K1Q92918 833 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 A0A0G2JLW4 131 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 JAK2O60674 1132 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 HELBQ8NG08 1087 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 BRF1Q92994 677 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 F13A1P00488 732 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 ADORA1P30542 326 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 GUCY1B3Q02153 619 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 TTC39AQ5SRH9 613 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 STK11IPQ8N1F8 1099 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 PIGBQ92521 554 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 ZSWIM6Q9HCJ5 1215 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 PAG1Q9NWQ8 432 aa13.73□□□□□ -0.21
ARHGEF1-220ENST00000600274 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
ARHGEF1-220ENST00000600274 CAMK4Q16566 473 aa13.72□□□□□ -0.21
ARHGEF1-220ENST00000600274 SYAP1Q96A49 352 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF1-220ENST00000600274 UTYO14607 1347 aa13.72□□□□□ -0.21
ARHGEF1-220ENST00000600274 USP42Q9H9J4 1324 aaKnown RBP13.72□□□□□ -0.21
ARHGEF1-220ENST00000600274 TAF5LO75529 589 aa13.72□□□□□ -0.21
ARHGEF1-220ENST00000600274 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
ARHGEF1-220ENST00000600274 H3BQV1 296 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 ATP5JP18859 108 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 CLCN1P35523 988 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 FOXO4P98177 505 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 IFFO2Q5TF58 517 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 Q6ZUG5 572 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 CDC37L1Q7L3B6 337 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 CNNM1Q9NRU3 951 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 FAM184AQ8NB25 1140 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 NEK1Q96PY6 1258 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
ARHGEF1-220ENST00000600274 HLFQ16534 295 aa13.71□□□□□ -0.22
ARHGEF1-220ENST00000600274 METTL24Q5JXM2 366 aa13.71□□□□□ -0.22
ARHGEF1-220ENST00000600274 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.22
ARHGEF1-220ENST00000600274 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 ZNF142P52746 1687 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 ERVV-2B6SEH9 535 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 EYA2O00167 538 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 APPP05067 770 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 MCMDC2Q4G0Z9 681 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 LRSAM1Q6UWE0 723 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 TSPY26PQ9H489 355 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 ISY1Q9ULR0 285 aaKnown RBP13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 LMO7Q8WWI1 1683 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 STARD3NLO95772 234 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 CCDC173Q0VFZ6 552 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 IFIT5Q13325 482 aaKnown RBP13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 SNAP23O00161 211 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 CYP21A2P08686 494 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 RPS6KB1P23443 525 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 ZNF445P59923 1031 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 LDHAL6AQ6ZMR3 332 aa13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 ZSCAN31Q96LW9 406 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF1-220ENST00000600274 H7C1W4 665 aa13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 HCLS1P14317 486 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 IL15P40933 162 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms