RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 NTSR2O95665 410 aa23.66■■□□□ 1.38
SSBP4-207ENST00000600244 EGFRP00533 1210 aa23.66■■□□□ 1.38
SSBP4-207ENST00000600244 GPTP24298 496 aa23.66■■□□□ 1.38
SSBP4-207ENST00000600244 DPP8Q6V1X1 898 aaPredicted RBP23.66■■□□□ 1.38
SSBP4-207ENST00000600244 ZNF296Q8WUU4 475 aaPredicted RBP23.66■■□□□ 1.38
SSBP4-207ENST00000600244 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
SSBP4-207ENST00000600244 HDAC9Q9UKV0 1011 aa23.66■■□□□ 1.38
SSBP4-207ENST00000600244 ZBTB12Q9Y330 459 aaPredicted RBP23.66■■□□□ 1.38
SSBP4-207ENST00000600244 SP8Q8IXZ3 490 aa23.65■■□□□ 1.38
SSBP4-207ENST00000600244 ZNF34Q8IZ26 560 aa23.65■■□□□ 1.38
SSBP4-207ENST00000600244 MPNDQ8N594 471 aa23.65■■□□□ 1.38
SSBP4-207ENST00000600244 COL3A1P02461 1466 aaPredicted RBP23.64■■□□□ 1.38
SSBP4-207ENST00000600244 TBC1D10BQ4KMP7 808 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-207ENST00000600244 FBXO46Q6PJ61 603 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-207ENST00000600244 RASAL3Q86YV0 1011 aa23.64■■□□□ 1.37
SSBP4-207ENST00000600244 DCPSQ96C86 337 aaKnown RBP23.64■■□□□ 1.37
SSBP4-207ENST00000600244 NLRP3Q96P20 1036 aa23.64■■□□□ 1.37
SSBP4-207ENST00000600244 ABCC4O15439 1325 aa23.63■■□□□ 1.37
SSBP4-207ENST00000600244 U2SURPO15042 1029 aaKnown RBP23.63■■□□□ 1.37
SSBP4-207ENST00000600244 BBOX1O75936 387 aa23.63■■□□□ 1.37
SSBP4-207ENST00000600244 SLC10A5Q5PT55 438 aa23.63■■□□□ 1.37
SSBP4-207ENST00000600244 TTLL7Q6ZT98 887 aa23.63■■□□□ 1.37
SSBP4-207ENST00000600244 NGEFQ8N5V2 710 aa23.63■■□□□ 1.37
SSBP4-207ENST00000600244 TBC1D8O95759 1140 aa23.61■■□□□ 1.37
SSBP4-207ENST00000600244 NOM1Q5C9Z4 860 aaKnown RBP23.61■■□□□ 1.37
SSBP4-207ENST00000600244 HSPA5P11021 654 aaKnown RBP23.6■■□□□ 1.37
SSBP4-207ENST00000600244 TIMELESSQ9UNS1 1208 aa23.6■■□□□ 1.37
SSBP4-207ENST00000600244 PSMD14O00487 310 aa23.59■■□□□ 1.37
SSBP4-207ENST00000600244 EIF4G2P78344 907 aaKnown RBP eCLIP23.59■■□□□ 1.37
SSBP4-207ENST00000600244 MCM10Q7L590 875 aa23.59■■□□□ 1.37
SSBP4-207ENST00000600244 KIF6Q6ZMV9 814 aa23.58■■□□□ 1.37
SSBP4-207ENST00000600244 ZBTB3Q9H5J0 574 aa23.58■■□□□ 1.37
SSBP4-207ENST00000600244 GPR25O00155 361 aa23.57■■□□□ 1.36
SSBP4-207ENST00000600244 RBM26Q5T8P6 1007 aaKnown RBP23.57■■□□□ 1.36
SSBP4-207ENST00000600244 PPP1R42Q7Z4L9 355 aa23.57■■□□□ 1.36
SSBP4-207ENST00000600244 CDCA5Q96FF9 252 aa23.57■■□□□ 1.36
SSBP4-207ENST00000600244 MKI67P46013 3256 aaKnown RBP23.57■■□□□ 1.36
SSBP4-207ENST00000600244 RPS12P25398 132 aaKnown RBP23.56■■□□□ 1.36
SSBP4-207ENST00000600244 PRKAR2BP31323 418 aa23.56■■□□□ 1.36
SSBP4-207ENST00000600244 GIGYF2Q6Y7W6 1299 aaKnown RBP23.56■■□□□ 1.36
SSBP4-207ENST00000600244 SULF1Q8IWU6 871 aa23.56■■□□□ 1.36
SSBP4-207ENST00000600244 RSPH6AQ9H0K4 717 aa23.56■■□□□ 1.36
SSBP4-207ENST00000600244 PARP10Q53GL7 1025 aa23.55■■□□□ 1.36
SSBP4-207ENST00000600244 RRP7AQ9Y3A4 280 aaKnown RBP23.55■■□□□ 1.36
SSBP4-207ENST00000600244 DUOX1Q9NRD9 1551 aa23.55■■□□□ 1.36
SSBP4-207ENST00000600244 PER1O15534 1290 aaPredicted RBP23.54■■□□□ 1.36
SSBP4-207ENST00000600244 TM4SF4P48230 202 aa23.54■■□□□ 1.36
SSBP4-207ENST00000600244 FKBP1BP68106 108 aa23.54■■□□□ 1.36
SSBP4-207ENST00000600244 RTF1Q92541 710 aaKnown RBP23.54■■□□□ 1.36
SSBP4-207ENST00000600244 GGA3Q9NZ52 723 aa23.54■■□□□ 1.36
SSBP4-207ENST00000600244 ASTN2O75129 1339 aaPredicted RBP23.54■■□□□ 1.36
SSBP4-207ENST00000600244 LAMB4A4D0S4 1761 aa23.53■■□□□ 1.36
SSBP4-207ENST00000600244 POTEFA5A3E0 1075 aa23.53■■□□□ 1.36
SSBP4-207ENST00000600244 DCTN1Q14203 1278 aa23.53■■□□□ 1.36
SSBP4-207ENST00000600244 TAF7Q15545 349 aaPredicted RBP23.53■■□□□ 1.36
SSBP4-207ENST00000600244 KIF4BQ2VIQ3 1234 aa23.52■■□□□ 1.36
SSBP4-207ENST00000600244 UTP14AQ9BVJ6 771 aaKnown RBP23.52■■□□□ 1.36
SSBP4-207ENST00000600244 KCNQ5Q9NR82 932 aa23.52■■□□□ 1.36
SSBP4-207ENST00000600244 WASHC4Q2M389 1173 aa23.51■■□□□ 1.35
SSBP4-207ENST00000600244 CFHR5Q9BXR6 569 aa23.51■■□□□ 1.35
SSBP4-207ENST00000600244 DBNDD1Q9H9R9 158 aa23.51■■□□□ 1.35
SSBP4-207ENST00000600244 MIS18AQ9NYP9 233 aa23.51■■□□□ 1.35
SSBP4-207ENST00000600244 RTL9Q8NET4 1388 aa23.51■■□□□ 1.35
SSBP4-207ENST00000600244 FKTNO75072 461 aa23.5■■□□□ 1.35
SSBP4-207ENST00000600244 MYL6BP14649 208 aa23.5■■□□□ 1.35
SSBP4-207ENST00000600244 GRAPQ13588 217 aa23.5■■□□□ 1.35
SSBP4-207ENST00000600244 CC2D1BQ5T0F9 858 aaKnown RBP23.5■■□□□ 1.35
SSBP4-207ENST00000600244 GRAPLQ8TC17 118 aaPredicted RBP23.5■■□□□ 1.35
SSBP4-207ENST00000600244 HTATSF1O43719 755 aaKnown RBP23.49■■□□□ 1.35
SSBP4-207ENST00000600244 INTS3Q68E01 1043 aaKnown RBP23.49■■□□□ 1.35
SSBP4-207ENST00000600244 ANKRD36CQ5JPF3 1778 aa23.48■■□□□ 1.35
SSBP4-207ENST00000600244 PAPPA2Q9BXP8 1791 aa23.48■■□□□ 1.35
SSBP4-207ENST00000600244 DDX46Q7L014 1031 aaKnown RBP23.48■■□□□ 1.35
SSBP4-207ENST00000600244 TMC4Q7Z404 712 aa23.48■■□□□ 1.35
SSBP4-207ENST00000600244 R3HDMLQ9H3Y0 253 aa23.48■■□□□ 1.35
SSBP4-207ENST00000600244 MOB2Q70IA6 237 aa23.47■■□□□ 1.35
SSBP4-207ENST00000600244 COLQQ9Y215 455 aaPredicted RBP23.47■■□□□ 1.35
SSBP4-207ENST00000600244 LAMB2P55268 1798 aa23.47■■□□□ 1.35
SSBP4-207ENST00000600244 VIL1P09327 827 aaKnown RBP23.46■■□□□ 1.35
SSBP4-207ENST00000600244 HCLS1P14317 486 aaPredicted RBP23.46■■□□□ 1.35
SSBP4-207ENST00000600244 KIAA0100Q14667 2235 aaKnown RBP23.45■■□□□ 1.35
SSBP4-207ENST00000600244 UBE2Q2LH0YL09 131 aa23.45■■□□□ 1.34
SSBP4-207ENST00000600244 RIMBP2O15034 1052 aa23.45■■□□□ 1.34
SSBP4-207ENST00000600244 ECE2O60344 883 aa23.45■■□□□ 1.34
SSBP4-207ENST00000600244 ANGEL2Q5VTE6 544 aaKnown RBP23.45■■□□□ 1.34
SSBP4-207ENST00000600244 LRRC37AA6NMS7 1700 aa23.45■■□□□ 1.34
SSBP4-207ENST00000600244 ZNF280AP59817 542 aaPredicted RBP23.44■■□□□ 1.34
SSBP4-207ENST00000600244 EIF4A1P60842 406 aaKnown RBP23.44■■□□□ 1.34
SSBP4-207ENST00000600244 SCARF1Q14162 830 aa23.44■■□□□ 1.34
SSBP4-207ENST00000600244 LRP10Q7Z4F1 713 aa23.44■■□□□ 1.34
SSBP4-207ENST00000600244 POLLQ9UGP5 575 aa23.44■■□□□ 1.34
SSBP4-207ENST00000600244 TAF1P21675 1872 aa23.44■■□□□ 1.34
SSBP4-207ENST00000600244 HTTP42858 3142 aa23.44■■□□□ 1.34
SSBP4-207ENST00000600244 DOK7Q18PE1 504 aa23.43■■□□□ 1.34
SSBP4-207ENST00000600244 NSFL1CQ9UNZ2 370 aaKnown RBP23.43■■□□□ 1.34
SSBP4-207ENST00000600244 DLL1O00548 723 aa23.42■■□□□ 1.34
SSBP4-207ENST00000600244 ERBB4Q15303 1308 aa23.41■■□□□ 1.34
SSBP4-207ENST00000600244 RBBP6Q7Z6E9 1792 aaKnown RBP23.41■■□□□ 1.34
SSBP4-207ENST00000600244 PITPNM2Q9BZ72 1349 aa23.4■■□□□ 1.34
SSBP4-207ENST00000600244 TRIOBPQ9H2D6 2365 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms