RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 USP50Q70EL3 339 aaPredicted RBP17.89■□□□□ 0.45
IRF3-225ENST00000600022 SP8Q8IXZ3 490 aa17.89■□□□□ 0.45
IRF3-225ENST00000600022 TRMT112Q9UI30 125 aaKnown RBP17.89■□□□□ 0.45
IRF3-225ENST00000600022 ZNRF3Q9ULT6 936 aa17.89■□□□□ 0.45
IRF3-225ENST00000600022 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
IRF3-225ENST00000600022 CHL1O00533 1208 aa17.88■□□□□ 0.45
IRF3-225ENST00000600022 BBOX1O75936 387 aa17.88■□□□□ 0.45
IRF3-225ENST00000600022 DPP8Q6V1X1 898 aaPredicted RBP17.88■□□□□ 0.45
IRF3-225ENST00000600022 MPNDQ8N594 471 aa17.88■□□□□ 0.45
IRF3-225ENST00000600022 CAPNS2Q96L46 248 aa17.88■□□□□ 0.45
IRF3-225ENST00000600022 CHPF2Q9P2E5 772 aa17.88■□□□□ 0.45
IRF3-225ENST00000600022 YDJCA8MPS7 323 aa17.87■□□□□ 0.45
IRF3-225ENST00000600022 AOC2O75106 756 aa17.87■□□□□ 0.45
IRF3-225ENST00000600022 PAXIP1Q6ZW49 1069 aaPredicted RBP17.87■□□□□ 0.45
IRF3-225ENST00000600022 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
IRF3-225ENST00000600022 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
IRF3-225ENST00000600022 ATP5J2-PTCD1G3V325 749 aa17.86■□□□□ 0.45
IRF3-225ENST00000600022 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
IRF3-225ENST00000600022 GPR101Q96P66 508 aaPredicted RBP17.86■□□□□ 0.45
IRF3-225ENST00000600022 ADARB2Q9NS39 739 aaKnown RBP17.86■□□□□ 0.45
IRF3-225ENST00000600022 TSKSQ9UJT2 592 aa17.86■□□□□ 0.45
IRF3-225ENST00000600022 COL4A1P02462 1669 aa17.86■□□□□ 0.45
IRF3-225ENST00000600022 LAMB2P55268 1798 aa17.86■□□□□ 0.45
IRF3-225ENST00000600022 KIAA2012Q0VF49 1180 aa17.85■□□□□ 0.45
IRF3-225ENST00000600022 GRAPQ13588 217 aa17.85■□□□□ 0.45
IRF3-225ENST00000600022 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
IRF3-225ENST00000600022 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
IRF3-225ENST00000600022 GRAPLQ8TC17 118 aaPredicted RBP17.85■□□□□ 0.45
IRF3-225ENST00000600022 TRPM4Q8TD43 1214 aa17.85■□□□□ 0.45
IRF3-225ENST00000600022 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
IRF3-225ENST00000600022 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
IRF3-225ENST00000600022 VPS33BQ9H267 617 aa17.85■□□□□ 0.45
IRF3-225ENST00000600022 KCNQ5Q9NR82 932 aa17.85■□□□□ 0.45
IRF3-225ENST00000600022 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
IRF3-225ENST00000600022 MAP2K1Q02750 393 aaPredicted RBP17.84■□□□□ 0.45
IRF3-225ENST00000600022 CIAPIN1Q6FI81 312 aa17.84■□□□□ 0.45
IRF3-225ENST00000600022 CELF1Q92879 486 aaKnown RBP17.84■□□□□ 0.45
IRF3-225ENST00000600022 MRS2Q9HD23 443 aa17.84■□□□□ 0.45
IRF3-225ENST00000600022 ADAMTS8Q9UP79 889 aa17.84■□□□□ 0.45
IRF3-225ENST00000600022 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
IRF3-225ENST00000600022 TLL2Q9Y6L7 1015 aa17.84■□□□□ 0.45
IRF3-225ENST00000600022 CELF2O95319 508 aaKnown RBP17.83■□□□□ 0.44
IRF3-225ENST00000600022 CCDC184Q52MB2 194 aa17.83■□□□□ 0.44
IRF3-225ENST00000600022 HSP90AB3PQ58FF7 597 aa17.83■□□□□ 0.44
IRF3-225ENST00000600022 SUPT20HQ8NEM7 779 aa17.83■□□□□ 0.44
IRF3-225ENST00000600022 ISCA1Q9BUE6 129 aa17.83■□□□□ 0.44
IRF3-225ENST00000600022 PGAP2Q9UHJ9 254 aa17.83■□□□□ 0.44
IRF3-225ENST00000600022 RIMBP2O15034 1052 aa17.82■□□□□ 0.44
IRF3-225ENST00000600022 EGFRP00533 1210 aa17.82■□□□□ 0.44
IRF3-225ENST00000600022 LMOD3Q0VAK6 560 aa17.82■□□□□ 0.44
IRF3-225ENST00000600022 ANKRD13DQ6ZTN6 518 aa17.82■□□□□ 0.44
IRF3-225ENST00000600022 SAPCD2Q86UD0 394 aa17.82■□□□□ 0.44
IRF3-225ENST00000600022 BCL2L13Q9BXK5 485 aa17.82■□□□□ 0.44
IRF3-225ENST00000600022 CNOT7Q9UIV1 285 aaKnown RBP17.82■□□□□ 0.44
IRF3-225ENST00000600022 DUOX1Q9NRD9 1551 aa17.82■□□□□ 0.44
IRF3-225ENST00000600022 HDGFL1Q5TGJ6 251 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 PLBD2Q8NHP8 589 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 RUNDC1Q96C34 613 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 ABHD8Q96I13 439 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 ZIC5Q96T25 663 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 DBNDD1Q9H9R9 158 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 POLLQ9UGP5 575 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 ANKRD36CQ5JPF3 1778 aa17.81■□□□□ 0.44
IRF3-225ENST00000600022 GPSM2P81274 684 aa17.8■□□□□ 0.44
IRF3-225ENST00000600022 SAMD7Q7Z3H4 446 aa17.8■□□□□ 0.44
IRF3-225ENST00000600022 USP48Q86UV5 1035 aa17.8■□□□□ 0.44
IRF3-225ENST00000600022 NSFL1CQ9UNZ2 370 aaKnown RBP17.8■□□□□ 0.44
IRF3-225ENST00000600022 PSMD14O00487 310 aa17.79■□□□□ 0.44
IRF3-225ENST00000600022 ECE1P42892 770 aa17.79■□□□□ 0.44
IRF3-225ENST00000600022 TNIP1Q15025 636 aa17.79■□□□□ 0.44
IRF3-225ENST00000600022 SF3B3Q15393 1217 aaKnown RBP17.79■□□□□ 0.44
IRF3-225ENST00000600022 DOK7Q18PE1 504 aa17.79■□□□□ 0.44
IRF3-225ENST00000600022 DUSP27Q5VZP5 1158 aa17.79■□□□□ 0.44
IRF3-225ENST00000600022 JARID2Q92833 1246 aaPredicted RBP17.79■□□□□ 0.44
IRF3-225ENST00000600022 TRPM7Q96QT4 1865 aa17.78■□□□□ 0.44
IRF3-225ENST00000600022 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
IRF3-225ENST00000600022 MICALL2Q8IY33 904 aa17.78■□□□□ 0.44
IRF3-225ENST00000600022 PHAXQ9H814 394 aaKnown RBP17.78■□□□□ 0.44
IRF3-225ENST00000600022 MBIPQ9NS73 344 aa17.78■□□□□ 0.44
IRF3-225ENST00000600022 DDX60Q8IY21 1712 aaKnown RBP17.78■□□□□ 0.44
IRF3-225ENST00000600022 C6orf229H3BNL8 230 aa17.77■□□□□ 0.44
IRF3-225ENST00000600022 ELL2O00472 640 aaPredicted RBP17.77■□□□□ 0.44
IRF3-225ENST00000600022 TBC1D10BQ4KMP7 808 aaPredicted RBP17.77■□□□□ 0.44
IRF3-225ENST00000600022 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
IRF3-225ENST00000600022 DBF4Q9UBU7 674 aaPredicted RBP17.77■□□□□ 0.44
IRF3-225ENST00000600022 IRS4O14654 1257 aaPredicted RBP17.76■□□□□ 0.43
IRF3-225ENST00000600022 RBM26Q5T8P6 1007 aaKnown RBP17.76■□□□□ 0.43
IRF3-225ENST00000600022 CDC37L1Q7L3B6 337 aa17.76■□□□□ 0.43
IRF3-225ENST00000600022 ZC3H15Q8WU90 426 aaKnown RBP17.76■□□□□ 0.43
IRF3-225ENST00000600022 RTL9Q8NET4 1388 aa17.76■□□□□ 0.43
IRF3-225ENST00000600022 THSD7BQ9C0I4 1608 aa17.76■□□□□ 0.43
IRF3-225ENST00000600022 H7C1D1 291 aa17.75■□□□□ 0.43
IRF3-225ENST00000600022 MAP2K2P36507 400 aa17.75■□□□□ 0.43
IRF3-225ENST00000600022 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
IRF3-225ENST00000600022 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
IRF3-225ENST00000600022 ASTN2O75129 1339 aaPredicted RBP17.74■□□□□ 0.43
IRF3-225ENST00000600022 WTIPA6NIX2 430 aaPredicted RBP17.74■□□□□ 0.43
IRF3-225ENST00000600022 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
IRF3-225ENST00000600022 RPS8P62241 208 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms