RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SUPT20HQ8NEM7 779 aa18.42■□□□□ 0.54
SHKBP1-218ENST00000598907 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-218ENST00000598907 UBN2Q6ZU65 1347 aa18.42■□□□□ 0.54
SHKBP1-218ENST00000598907 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
SHKBP1-218ENST00000598907 ANP32CO43423 234 aa18.41■□□□□ 0.54
SHKBP1-218ENST00000598907 DPP8Q6V1X1 898 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-218ENST00000598907 ATP6V0A2Q9Y487 856 aa18.41■□□□□ 0.54
SHKBP1-218ENST00000598907 EGFRP00533 1210 aa18.4■□□□□ 0.54
SHKBP1-218ENST00000598907 PKN2Q16513 984 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-218ENST00000598907 ZNF296Q8WUU4 475 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-218ENST00000598907 VPS33BQ9H267 617 aa18.4■□□□□ 0.54
SHKBP1-218ENST00000598907 YDJCA8MPS7 323 aa18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 FXR1P51114 621 aaKnown RBP eCLIP18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 KIAA2012Q0VF49 1180 aa18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 RBM26Q5T8P6 1007 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 SUSD4Q5VX71 490 aa18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 RASAL3Q86YV0 1011 aa18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 DCPSQ96C86 337 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 ABCC4O15439 1325 aa18.39■□□□□ 0.53
SHKBP1-218ENST00000598907 ZBTB3Q9H5J0 574 aa18.38■□□□□ 0.53
SHKBP1-218ENST00000598907 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-218ENST00000598907 COL3A1P02461 1466 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-218ENST00000598907 POLR2AP24928 1970 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-218ENST00000598907 KIF6Q6ZMV9 814 aa18.37■□□□□ 0.53
SHKBP1-218ENST00000598907 MPNDQ8N594 471 aa18.37■□□□□ 0.53
SHKBP1-218ENST00000598907 RTFDC1Q9BY42 306 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-218ENST00000598907 MAP3K15Q6ZN16 1313 aa18.37■□□□□ 0.53
SHKBP1-218ENST00000598907 NTSR2O95665 410 aa18.36■□□□□ 0.53
SHKBP1-218ENST00000598907 TTLL7Q6ZT98 887 aa18.36■□□□□ 0.53
SHKBP1-218ENST00000598907 MCM10Q7L590 875 aa18.36■□□□□ 0.53
SHKBP1-218ENST00000598907 DUOX1Q9NRD9 1551 aa18.36■□□□□ 0.53
SHKBP1-218ENST00000598907 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-218ENST00000598907 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-218ENST00000598907 MIER1Q8N108 512 aa18.35■□□□□ 0.53
SHKBP1-218ENST00000598907 CDCA5Q96FF9 252 aa18.35■□□□□ 0.53
SHKBP1-218ENST00000598907 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
SHKBP1-218ENST00000598907 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-218ENST00000598907 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
SHKBP1-218ENST00000598907 PSMD14O00487 310 aa18.34■□□□□ 0.53
SHKBP1-218ENST00000598907 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
SHKBP1-218ENST00000598907 SULF1Q8IWU6 871 aa18.34■□□□□ 0.53
SHKBP1-218ENST00000598907 PHACTR3Q96KR7 559 aa18.34■□□□□ 0.53
SHKBP1-218ENST00000598907 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
SHKBP1-218ENST00000598907 LAMB2P55268 1798 aa18.34■□□□□ 0.53
SHKBP1-218ENST00000598907 ASTN2O75129 1339 aaPredicted RBP18.33■□□□□ 0.53
SHKBP1-218ENST00000598907 MYL6BP14649 208 aa18.33■□□□□ 0.52
SHKBP1-218ENST00000598907 PRKAR2BP31323 418 aa18.33■□□□□ 0.52
SHKBP1-218ENST00000598907 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-218ENST00000598907 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
SHKBP1-218ENST00000598907 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
SHKBP1-218ENST00000598907 REM2Q8IYK8 340 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-218ENST00000598907 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-218ENST00000598907 DBNDD1Q9H9R9 158 aa18.32■□□□□ 0.52
SHKBP1-218ENST00000598907 POTEFA5A3E0 1075 aa18.31■□□□□ 0.52
SHKBP1-218ENST00000598907 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
SHKBP1-218ENST00000598907 DPF2Q92785 391 aa18.31■□□□□ 0.52
SHKBP1-218ENST00000598907 PAPPA2Q9BXP8 1791 aa18.31■□□□□ 0.52
SHKBP1-218ENST00000598907 GPR25O00155 361 aa18.3■□□□□ 0.52
SHKBP1-218ENST00000598907 MKRN3Q13064 507 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-218ENST00000598907 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
SHKBP1-218ENST00000598907 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
SHKBP1-218ENST00000598907 RIMBP2O15034 1052 aa18.29■□□□□ 0.52
SHKBP1-218ENST00000598907 MOB2Q70IA6 237 aa18.29■□□□□ 0.52
SHKBP1-218ENST00000598907 ZNF34Q8IZ26 560 aa18.29■□□□□ 0.52
SHKBP1-218ENST00000598907 TAF1P21675 1872 aa18.29■□□□□ 0.52
SHKBP1-218ENST00000598907 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
SHKBP1-218ENST00000598907 BBOX1O75936 387 aa18.28■□□□□ 0.52
SHKBP1-218ENST00000598907 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
SHKBP1-218ENST00000598907 MKI67P46013 3256 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-218ENST00000598907 DDX60Q8IY21 1712 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-218ENST00000598907 KCNQ5Q9NR82 932 aa18.27■□□□□ 0.52
SHKBP1-218ENST00000598907 COLQQ9Y215 455 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-218ENST00000598907 FKTNO75072 461 aa18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 HCLS1P14317 486 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 RPS12P25398 132 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 WASHC4Q2M389 1173 aa18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 PARP10Q53GL7 1025 aa18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 ANGEL2Q5VTE6 544 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 DDX46Q7L014 1031 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 UTP14AQ9BVJ6 771 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 SCAF8Q9UPN6 1271 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 ANKRD36CQ5JPF3 1778 aa18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
SHKBP1-218ENST00000598907 UBE2Q2LH0YL09 131 aa18.25■□□□□ 0.51
SHKBP1-218ENST00000598907 DLL1O00548 723 aa18.25■□□□□ 0.51
SHKBP1-218ENST00000598907 ECE2O60344 883 aa18.25■□□□□ 0.51
SHKBP1-218ENST00000598907 GRAPQ13588 217 aa18.25■□□□□ 0.51
SHKBP1-218ENST00000598907 DOK7Q18PE1 504 aa18.25■□□□□ 0.51
SHKBP1-218ENST00000598907 GIGYF2Q6Y7W6 1299 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-218ENST00000598907 GRAPLQ8TC17 118 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-218ENST00000598907 RBBP6Q7Z6E9 1792 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-218ENST00000598907 TTLL12Q14166 644 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-218ENST00000598907 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
SHKBP1-218ENST00000598907 R3HDMLQ9H3Y0 253 aa18.24■□□□□ 0.51
SHKBP1-218ENST00000598907 KDM3BQ7LBC6 1761 aa18.24■□□□□ 0.51
SHKBP1-218ENST00000598907 C6orf229H3BNL8 230 aa18.23■□□□□ 0.51
SHKBP1-218ENST00000598907 FKBP1BP68106 108 aa18.23■□□□□ 0.51
SHKBP1-218ENST00000598907 ZNF428Q96B54 188 aa18.23■□□□□ 0.51
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