RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 PPIP5K2O43314 1243 aa18.71■□□□□ 0.59
XRCC1-208ENST00000598422 PCCAP05165 728 aaPredicted RBP18.71■□□□□ 0.59
XRCC1-208ENST00000598422 APLP1P51693 650 aa18.71■□□□□ 0.59
XRCC1-208ENST00000598422 FLIIQ13045 1269 aa18.71■□□□□ 0.59
XRCC1-208ENST00000598422 FKBP5Q13451 457 aaPredicted RBP18.71■□□□□ 0.59
XRCC1-208ENST00000598422 MPNDQ8N594 471 aa18.71■□□□□ 0.59
XRCC1-208ENST00000598422 G2E3Q7L622 706 aa18.7■□□□□ 0.58
XRCC1-208ENST00000598422 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
XRCC1-208ENST00000598422 FZD9O00144 591 aa18.69■□□□□ 0.58
XRCC1-208ENST00000598422 VAMP4O75379 141 aa18.69■□□□□ 0.58
XRCC1-208ENST00000598422 CCDC152Q4G0S7 254 aa18.69■□□□□ 0.58
XRCC1-208ENST00000598422 L3MBTL3Q96JM7 780 aaPredicted RBP18.69■□□□□ 0.58
XRCC1-208ENST00000598422 POTECB2RU33 542 aa18.68■□□□□ 0.58
XRCC1-208ENST00000598422 PDE8AO60658 829 aa18.68■□□□□ 0.58
XRCC1-208ENST00000598422 IGKV5-2P06315 115 aa18.68■□□□□ 0.58
XRCC1-208ENST00000598422 AOC3Q16853 763 aa18.68■□□□□ 0.58
XRCC1-208ENST00000598422 JARID2Q92833 1246 aaPredicted RBP18.68■□□□□ 0.58
XRCC1-208ENST00000598422 CELF1Q92879 486 aaKnown RBP18.68■□□□□ 0.58
XRCC1-208ENST00000598422 VPS33BQ9H267 617 aa18.68■□□□□ 0.58
XRCC1-208ENST00000598422 WDR90Q96KV7 1748 aa18.68■□□□□ 0.58
XRCC1-208ENST00000598422 CWF19L2Q2TBE0 894 aaKnown RBP18.67■□□□□ 0.58
XRCC1-208ENST00000598422 GPC2Q8N158 579 aa18.67■□□□□ 0.58
XRCC1-208ENST00000598422 RTFDC1Q9BY42 306 aaPredicted RBP18.67■□□□□ 0.58
XRCC1-208ENST00000598422 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
XRCC1-208ENST00000598422 NEURL1BA8MQ27 555 aa18.66■□□□□ 0.58
XRCC1-208ENST00000598422 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
XRCC1-208ENST00000598422 DNAAF4Q8WXU2 420 aa18.66■□□□□ 0.58
XRCC1-208ENST00000598422 CCDC85AQ96PX6 553 aaPredicted RBP18.66■□□□□ 0.58
XRCC1-208ENST00000598422 HACL1Q9UJ83 578 aa18.66■□□□□ 0.58
XRCC1-208ENST00000598422 ZNF521Q96K83 1311 aa18.66■□□□□ 0.58
XRCC1-208ENST00000598422 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
XRCC1-208ENST00000598422 LMOD1P29536 600 aaPredicted RBP18.65■□□□□ 0.58
XRCC1-208ENST00000598422 CTSWP56202 376 aa18.65■□□□□ 0.58
XRCC1-208ENST00000598422 RPS8P62241 208 aaKnown RBP18.65■□□□□ 0.58
XRCC1-208ENST00000598422 TAF1DQ9H5J8 278 aaPredicted RBP18.65■□□□□ 0.58
XRCC1-208ENST00000598422 NSFL1CQ9UNZ2 370 aaKnown RBP18.65■□□□□ 0.58
XRCC1-208ENST00000598422 E9PSI1 815 aa18.64■□□□□ 0.57
XRCC1-208ENST00000598422 KIAA2012Q0VF49 1180 aa18.64■□□□□ 0.57
XRCC1-208ENST00000598422 EAPPQ56P03 285 aaPredicted RBP18.64■□□□□ 0.57
XRCC1-208ENST00000598422 UBE3BQ7Z3V4 1068 aa18.64■□□□□ 0.57
XRCC1-208ENST00000598422 DICER1Q9UPY3 1922 aaKnown RBP18.64■□□□□ 0.57
XRCC1-208ENST00000598422 DDX60Q8IY21 1712 aaKnown RBP18.63■□□□□ 0.57
XRCC1-208ENST00000598422 CCDC88AQ3V6T2 1871 aa18.63■□□□□ 0.57
XRCC1-208ENST00000598422 EPHX2P34913 555 aa18.63■□□□□ 0.57
XRCC1-208ENST00000598422 CHADLQ6NUI6 762 aa18.63■□□□□ 0.57
XRCC1-208ENST00000598422 LDHDQ86WU2 507 aa18.63■□□□□ 0.57
XRCC1-208ENST00000598422 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
XRCC1-208ENST00000598422 SEC31BQ9NQW1 1179 aa18.63■□□□□ 0.57
XRCC1-208ENST00000598422 ZNRF3Q9ULT6 936 aa18.63■□□□□ 0.57
XRCC1-208ENST00000598422 COL4A5P29400 1685 aa18.63■□□□□ 0.57
XRCC1-208ENST00000598422 C6orf229H3BNL8 230 aa18.62■□□□□ 0.57
XRCC1-208ENST00000598422 GCKRQ14397 625 aa18.62■□□□□ 0.57
XRCC1-208ENST00000598422 ANKRD18AQ8IVF6 992 aa18.62■□□□□ 0.57
XRCC1-208ENST00000598422 CDC5LQ99459 802 aaKnown RBP18.62■□□□□ 0.57
XRCC1-208ENST00000598422 LAMB2P55268 1798 aa18.62■□□□□ 0.57
XRCC1-208ENST00000598422 GPSM2P81274 684 aa18.61■□□□□ 0.57
XRCC1-208ENST00000598422 EYA3Q99504 573 aa18.61■□□□□ 0.57
XRCC1-208ENST00000598422 ANKIB1Q9P2G1 1089 aa18.61■□□□□ 0.57
XRCC1-208ENST00000598422 CLEC11AQ9Y240 323 aa18.61■□□□□ 0.57
XRCC1-208ENST00000598422 F6X3S4 739 aa18.6■□□□□ 0.57
XRCC1-208ENST00000598422 POTEIP0CG38 1075 aa18.6■□□□□ 0.57
XRCC1-208ENST00000598422 POTEJP0CG39 1038 aa18.6■□□□□ 0.57
XRCC1-208ENST00000598422 WASHC4Q2M389 1173 aa18.6■□□□□ 0.57
XRCC1-208ENST00000598422 PNMA8AQ86V59 439 aaPredicted RBP18.6■□□□□ 0.57
XRCC1-208ENST00000598422 H7C1W4 665 aa18.59■□□□□ 0.57
XRCC1-208ENST00000598422 CIAPIN1Q6FI81 312 aa18.59■□□□□ 0.57
XRCC1-208ENST00000598422 GGA1Q9UJY5 639 aa18.59■□□□□ 0.57
XRCC1-208ENST00000598422 RIMBP2O15034 1052 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 RAD17O75943 681 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 UFL1O94874 794 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 HTRA3P83110 453 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 CXCL9Q07325 125 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 TNIP1Q15025 636 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 TTLL11Q8NHH1 800 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 GREM2Q9H772 168 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 POLLQ9UGP5 575 aa18.58■□□□□ 0.56
XRCC1-208ENST00000598422 DUOX1Q9NRD9 1551 aa18.57■□□□□ 0.56
XRCC1-208ENST00000598422 G3V3G9 751 aa18.57■□□□□ 0.56
XRCC1-208ENST00000598422 SCNN1DP51172 638 aa18.57■□□□□ 0.56
XRCC1-208ENST00000598422 DCAF8Q5TAQ9 597 aa18.57■□□□□ 0.56
XRCC1-208ENST00000598422 SLC4A10Q6U841 1118 aa18.57■□□□□ 0.56
XRCC1-208ENST00000598422 TBC1D16Q8TBP0 767 aa18.57■□□□□ 0.56
XRCC1-208ENST00000598422 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
XRCC1-208ENST00000598422 LRRC37AA6NMS7 1700 aa18.57■□□□□ 0.56
XRCC1-208ENST00000598422 RTL9Q8NET4 1388 aa18.56■□□□□ 0.56
XRCC1-208ENST00000598422 IGHMBP2P38935 993 aaKnown RBP18.56■□□□□ 0.56
XRCC1-208ENST00000598422 SLFN5Q08AF3 891 aa18.56■□□□□ 0.56
XRCC1-208ENST00000598422 BEND3Q5T5X7 828 aa18.56■□□□□ 0.56
XRCC1-208ENST00000598422 PLA2G12BQ9BX93 195 aa18.56■□□□□ 0.56
XRCC1-208ENST00000598422 ZC3H12CQ9C0D7 883 aaKnown RBP18.56■□□□□ 0.56
XRCC1-208ENST00000598422 DBNDD1Q9H9R9 158 aa18.56■□□□□ 0.56
XRCC1-208ENST00000598422 PODXL2Q9NZ53 605 aa18.56■□□□□ 0.56
XRCC1-208ENST00000598422 XDHP47989 1333 aa18.55■□□□□ 0.56
XRCC1-208ENST00000598422 COL4A1P02462 1669 aa18.55■□□□□ 0.56
XRCC1-208ENST00000598422 GMPSP49915 693 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-208ENST00000598422 FAM161AQ3B820 660 aa18.55■□□□□ 0.56
XRCC1-208ENST00000598422 GPR101Q96P66 508 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-208ENST00000598422 ECE2O60344 883 aa18.54■□□□□ 0.56
XRCC1-208ENST00000598422 EPS15P42566 896 aa18.54■□□□□ 0.56
XRCC1-208ENST00000598422 DOK7Q18PE1 504 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms