RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 TNRC6CQ9HCJ0 1690 aaKnown RBP27.77■■■□□ 2.04
CHMP2A-204ENST00000597848 FOXO4P98177 505 aa27.76■■■□□ 2.03
CHMP2A-204ENST00000597848 EPHA10Q5JZY3 1008 aa27.76■■■□□ 2.03
CHMP2A-204ENST00000597848 TTLL11Q8NHH1 800 aa27.76■■■□□ 2.03
CHMP2A-204ENST00000597848 DDX19BQ9UMR2 479 aa27.76■■■□□ 2.03
CHMP2A-204ENST00000597848 CHMP3Q9Y3E7 222 aa27.76■■■□□ 2.03
CHMP2A-204ENST00000597848 ZBTB7BO15156 539 aaPredicted RBP27.75■■■□□ 2.03
CHMP2A-204ENST00000597848 CNKSR1Q969H4 720 aa27.75■■■□□ 2.03
CHMP2A-204ENST00000597848 N4BP2Q86UW6 1770 aaPredicted RBP27.75■■■□□ 2.03
CHMP2A-204ENST00000597848 ALDH1B1P30837 517 aa27.74■■■□□ 2.03
CHMP2A-204ENST00000597848 HOXA10P31260 410 aaPredicted RBP27.74■■■□□ 2.03
CHMP2A-204ENST00000597848 LMBR1LQ6UX01 489 aa27.74■■■□□ 2.03
CHMP2A-204ENST00000597848 TTLL6Q8N841 843 aa27.74■■■□□ 2.03
CHMP2A-204ENST00000597848 KAZALD1Q96I82 304 aa27.74■■■□□ 2.03
CHMP2A-204ENST00000597848 BICC1Q9H694 974 aaKnown RBP27.74■■■□□ 2.03
CHMP2A-204ENST00000597848 LRRFIP2Q9Y608 721 aaKnown RBP27.74■■■□□ 2.03
CHMP2A-204ENST00000597848 DDX60Q8IY21 1712 aaKnown RBP27.74■■■□□ 2.03
CHMP2A-204ENST00000597848 DALRD3Q5D0E6 543 aaKnown RBP27.73■■■□□ 2.03
CHMP2A-204ENST00000597848 PELP1Q8IZL8 1130 aaKnown RBP27.73■■■□□ 2.03
CHMP2A-204ENST00000597848 CRAMP1Q96RY5 1269 aa27.73■■■□□ 2.03
CHMP2A-204ENST00000597848 GNAI2P04899 355 aa27.72■■■□□ 2.03
CHMP2A-204ENST00000597848 CSF1RP07333 972 aa27.72■■■□□ 2.03
CHMP2A-204ENST00000597848 CHMP4BQ9H444 224 aaKnown RBP27.72■■■□□ 2.03
CHMP2A-204ENST00000597848 GREM2Q9H772 168 aa27.72■■■□□ 2.03
CHMP2A-204ENST00000597848 SEC31BQ9NQW1 1179 aa27.71■■■□□ 2.03
CHMP2A-204ENST00000597848 BCS1LQ9Y276 419 aa27.71■■■□□ 2.03
CHMP2A-204ENST00000597848 FAM161AQ3B820 660 aa27.7■■■□□ 2.02
CHMP2A-204ENST00000597848 ANKRD44Q8N8A2 993 aa27.7■■■□□ 2.02
CHMP2A-204ENST00000597848 LAMB2P55268 1798 aa27.7■■■□□ 2.02
CHMP2A-204ENST00000597848 PRPF40BQ6NWY9 871 aaKnown RBP27.69■■■□□ 2.02
CHMP2A-204ENST00000597848 COL11A2P13942 1736 aaPredicted RBP27.69■■■□□ 2.02
CHMP2A-204ENST00000597848 KIAA1551Q9HCM1 1747 aa27.69■■■□□ 2.02
CHMP2A-204ENST00000597848 ITGA6P23229 1130 aa27.68■■■□□ 2.02
CHMP2A-204ENST00000597848 GRAPQ13588 217 aa27.68■■■□□ 2.02
CHMP2A-204ENST00000597848 RABL6Q3YEC7 729 aaPredicted RBP27.68■■■□□ 2.02
CHMP2A-204ENST00000597848 GRAPLQ8TC17 118 aaPredicted RBP27.68■■■□□ 2.02
CHMP2A-204ENST00000597848 C1orf115Q9H7X2 142 aa27.68■■■□□ 2.02
CHMP2A-204ENST00000597848 ZNF219Q9P2Y4 722 aaPredicted RBP27.68■■■□□ 2.02
CHMP2A-204ENST00000597848 ANKRD18BA2A2Z9 1011 aa27.67■■■□□ 2.02
CHMP2A-204ENST00000597848 IFIT5Q13325 482 aaKnown RBP27.67■■■□□ 2.02
CHMP2A-204ENST00000597848 CCDC57Q2TAC2 916 aa27.67■■■□□ 2.02
CHMP2A-204ENST00000597848 CELF1Q92879 486 aaKnown RBP27.67■■■□□ 2.02
CHMP2A-204ENST00000597848 CRBNQ96SW2 442 aa27.67■■■□□ 2.02
CHMP2A-204ENST00000597848 CDC5LQ99459 802 aaKnown RBP27.67■■■□□ 2.02
CHMP2A-204ENST00000597848 BBOX1O75936 387 aa27.66■■■□□ 2.02
CHMP2A-204ENST00000597848 RPS8P62241 208 aaKnown RBP27.66■■■□□ 2.02
CHMP2A-204ENST00000597848 GPR162Q16538 588 aa27.66■■■□□ 2.02
CHMP2A-204ENST00000597848 RTL9Q8NET4 1388 aa27.65■■■□□ 2.02
CHMP2A-204ENST00000597848 PPEF1O14829 653 aaPredicted RBP27.65■■■□□ 2.02
CHMP2A-204ENST00000597848 ANKRD18AQ8IVF6 992 aa27.65■■■□□ 2.02
CHMP2A-204ENST00000597848 TAF7LQ5H9L4 462 aa27.64■■■□□ 2.02
CHMP2A-204ENST00000597848 ZBTB40Q9NUA8 1239 aa27.64■■■□□ 2.02
CHMP2A-204ENST00000597848 C21orf2O43822 256 aa27.63■■■□□ 2.01
CHMP2A-204ENST00000597848 IGHMBP2P38935 993 aaKnown RBP27.63■■■□□ 2.01
CHMP2A-204ENST00000597848 TMX4Q9H1E5 349 aaPredicted RBP27.63■■■□□ 2.01
CHMP2A-204ENST00000597848 MYH3P11055 1940 aa27.63■■■□□ 2.01
CHMP2A-204ENST00000597848 IRX6P78412 446 aaPredicted RBP27.62■■■□□ 2.01
CHMP2A-204ENST00000597848 DLEC1Q9Y238 1755 aa27.62■■■□□ 2.01
CHMP2A-204ENST00000597848 DCAF8L1A6NGE4 600 aa27.61■■■□□ 2.01
CHMP2A-204ENST00000597848 MPHOSPH8Q99549 860 aa27.61■■■□□ 2.01
CHMP2A-204ENST00000597848 SRCAPQ6ZRS2 3230 aa27.6■■■□□ 2.01
CHMP2A-204ENST00000597848 YBX3P16989 372 aaKnown RBP eCLIP27.6■■■□□ 2.015e-16■□□□□ 9
CHMP2A-204ENST00000597848 TMC4Q7Z404 712 aa27.6■■■□□ 2.01
CHMP2A-204ENST00000597848 ZNF594Q96JF6 807 aaPredicted RBP27.6■■■□□ 2.01
CHMP2A-204ENST00000597848 SRGAP3O43295 1099 aa27.59■■■□□ 2.01
CHMP2A-204ENST00000597848 ATP6V0A2Q9Y487 856 aa27.59■■■□□ 2.01
CHMP2A-204ENST00000597848 SLX4Q8IY92 1834 aa27.58■■■□□ 2.01
CHMP2A-204ENST00000597848 ATP8B2P98198 1209 aa27.58■■■□□ 2.01
CHMP2A-204ENST00000597848 MTX1Q13505 466 aa27.58■■■□□ 2.01
CHMP2A-204ENST00000597848 OLFM4Q6UX06 510 aa27.58■■■□□ 2.01
CHMP2A-204ENST00000597848 SP8Q8IXZ3 490 aa27.58■■■□□ 2.01
CHMP2A-204ENST00000597848 C7orf43Q8WVR3 580 aa27.58■■■□□ 2.01
CHMP2A-204ENST00000597848 SOGA3Q5TF21 947 aa27.57■■■□□ 2
CHMP2A-204ENST00000597848 BSDC1Q9NW68 430 aaPredicted RBP27.57■■■□□ 2
CHMP2A-204ENST00000597848 TAF1P21675 1872 aa27.56■■■□□ 2
CHMP2A-204ENST00000597848 BRCA1P38398 1863 aaKnown RBP27.56■■■□□ 2
CHMP2A-204ENST00000597848 CC2D2BQ6DHV5 1058 aa27.56■■■□□ 2
CHMP2A-204ENST00000597848 LDHAL6AQ6ZMR3 332 aa27.56■■■□□ 2
CHMP2A-204ENST00000597848 ARHGAP27Q6ZUM4 889 aa27.56■■■□□ 2
CHMP2A-204ENST00000597848 EXOC6Q8TAG9 804 aa27.56■■■□□ 2
CHMP2A-204ENST00000597848 KLHDC4Q8TBB5 520 aa27.56■■■□□ 2
CHMP2A-204ENST00000597848 PNMA6EA0A0J9YXQ4 647 aa27.55■■■□□ 2
CHMP2A-204ENST00000597848 RFX5P48382 616 aaPredicted RBP27.55■■■□□ 2
CHMP2A-204ENST00000597848 CCDC93Q567U6 631 aa27.55■■■□□ 2
CHMP2A-204ENST00000597848 CEP85Q6P2H3 762 aa27.55■■■□□ 2
CHMP2A-204ENST00000597848 SLC51AQ86UW1 340 aa27.55■■■□□ 2
CHMP2A-204ENST00000597848 CNNM1Q9NRU3 951 aa27.55■■■□□ 2
CHMP2A-204ENST00000597848 GRIN3BO60391 1043 aa27.54■■■□□ 2
CHMP2A-204ENST00000597848 COL4A1P02462 1669 aa27.54■■■□□ 2
CHMP2A-204ENST00000597848 CACNA1SQ13698 1873 aa27.53■■■□□ 2
CHMP2A-204ENST00000597848 RPAP2Q8IXW5 612 aaPredicted RBP27.53■■■□□ 2
CHMP2A-204ENST00000597848 PTPN12Q05209 780 aaKnown RBP27.52■■■□□ 2
CHMP2A-204ENST00000597848 RTKN2Q8IZC4 609 aa27.52■■■□□ 2
CHMP2A-204ENST00000597848 PUS3Q9BZE2 481 aaKnown RBP27.52■■■□□ 2
CHMP2A-204ENST00000597848 MPNDQ8N594 471 aa27.51■■□□□ 1.99
CHMP2A-204ENST00000597848 SIL1Q9H173 461 aa27.51■■□□□ 1.99
CHMP2A-204ENST00000597848 ANKIB1Q9P2G1 1089 aa27.51■■□□□ 1.99
CHMP2A-204ENST00000597848 MINPP1Q9UNW1 487 aa27.51■■□□□ 1.99
CHMP2A-204ENST00000597848 NSFL1CQ9UNZ2 370 aaKnown RBP27.51■■□□□ 1.99
CHMP2A-204ENST00000597848 PA2G4Q9UQ80 394 aaKnown RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms