RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 CCDC174Q6PII3 467 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 SAMD1Q6SPF0 538 aaPredicted RBP9.17□□□□□ -0.94
FARP1-219ENST00000596580 CYLC1P35663 651 aaPredicted RBP9.17□□□□□ -0.94
FARP1-219ENST00000596580 MSH6P52701 1360 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 TSNARE1Q96NA8 513 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 EXOC6BQ9Y2D4 811 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 SMARCC1Q92922 1105 aaPredicted RBP9.17□□□□□ -0.94
FARP1-219ENST00000596580 RRS1Q15050 365 aaKnown RBP9.17□□□□□ -0.94
FARP1-219ENST00000596580 PPP2R5BQ15173 497 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 GIMAP7Q8NHV1 300 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 FLT4P35916 1363 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 CCDC77Q9BR77 488 aa9.17□□□□□ -0.94
FARP1-219ENST00000596580 PSMA7O14818 248 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 FAM200AQ8TCP9 573 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 PHF8Q9UPP1 1060 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 MTMR7Q9Y216 660 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 ZNF165P49910 485 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 ABCF2Q9UG63 623 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 KLHL34Q8N239 644 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 GOLGA8AA7E2F4 631 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 NEK1Q96PY6 1258 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 BRAPQ7Z569 592 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 KIAA1524Q8TCG1 905 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 EXOC1Q9NV70 894 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 PABPN1LA6NDY0 278 aaKnown RBP9.16□□□□□ -0.94
FARP1-219ENST00000596580 BMS1Q14692 1282 aaKnown RBP9.16□□□□□ -0.94
FARP1-219ENST00000596580 IFIT3O14879 490 aaKnown RBP9.16□□□□□ -0.94
FARP1-219ENST00000596580 METAP2P50579 478 aaKnown RBP eCLIP9.16□□□□□ -0.94
FARP1-219ENST00000596580 NPHP3Q7Z494 1330 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 TNRQ92752 1358 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 CABP5Q9NP86 173 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 NUCB1Q02818 461 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 CTNNA2P26232 953 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 KRT83P78385 493 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 ST5P78524 1137 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 NAP1L3Q99457 506 aaPredicted RBP9.16□□□□□ -0.94
FARP1-219ENST00000596580 KAT14Q9H8E8 782 aa9.16□□□□□ -0.94
FARP1-219ENST00000596580 CTR9Q6PD62 1173 aa9.15□□□□□ -0.94
FARP1-219ENST00000596580 DDX54Q8TDD1 881 aaKnown RBP9.15□□□□□ -0.94
FARP1-219ENST00000596580 NLRP5P59047 1200 aa9.15□□□□□ -0.94
FARP1-219ENST00000596580 HDAC9Q9UKV0 1011 aa9.15□□□□□ -0.94
FARP1-219ENST00000596580 C11orf95C9JLR9 678 aaPredicted RBP9.15□□□□□ -0.94
FARP1-219ENST00000596580 HOXB7P09629 217 aa9.15□□□□□ -0.94
FARP1-219ENST00000596580 PHF23Q9BUL5 403 aaPredicted RBP9.15□□□□□ -0.94
FARP1-219ENST00000596580 NYXQ9GZU5 481 aa9.15□□□□□ -0.94
FARP1-219ENST00000596580 SSR1P43307 286 aaKnown RBP9.15□□□□□ -0.94
FARP1-219ENST00000596580 MTIF2P46199 727 aaKnown RBP9.15□□□□□ -0.94
FARP1-219ENST00000596580 CCDC155Q8N6L0 562 aa9.15□□□□□ -0.94
FARP1-219ENST00000596580 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.94
FARP1-219ENST00000596580 TRIM14Q14142 442 aa9.15□□□□□ -0.94
FARP1-219ENST00000596580 FSIP1Q8NA03 581 aa9.15□□□□□ -0.95
FARP1-219ENST00000596580 CLASP1Q7Z460 1538 aa9.15□□□□□ -0.95
FARP1-219ENST00000596580 RANBP6O60518 1105 aaKnown RBP9.15□□□□□ -0.95
FARP1-219ENST00000596580 GNA11P29992 359 aa9.15□□□□□ -0.95
FARP1-219ENST00000596580 CCDC14Q49A88 953 aa9.15□□□□□ -0.95
FARP1-219ENST00000596580 CROCCP2Q86T23 111 aa9.15□□□□□ -0.95
FARP1-219ENST00000596580 OPA1O60313 960 aa9.15□□□□□ -0.95
FARP1-219ENST00000596580 DDX46Q7L014 1031 aaKnown RBP9.15□□□□□ -0.95
FARP1-219ENST00000596580 IL15P40933 162 aaPredicted RBP9.15□□□□□ -0.95
FARP1-219ENST00000596580 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.95
FARP1-219ENST00000596580 TNPO1Q92973 898 aaKnown RBP9.14□□□□□ -0.95
FARP1-219ENST00000596580 IMPG2Q9BZV3 1241 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 CCDC40Q4G0X9 1142 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 SNW1Q13573 536 aaKnown RBP9.14□□□□□ -0.95
FARP1-219ENST00000596580 SYKP43405 635 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 TMEM67Q5HYA8 995 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 TBC1D9Q6ZT07 1266 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 CDCA7Q9BWT1 371 aaPredicted RBP9.14□□□□□ -0.95
FARP1-219ENST00000596580 ARFGAP3Q9NP61 516 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 ZMYM4Q5VZL5 1548 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 ATP2A2P16615 1042 aaKnown RBP9.14□□□□□ -0.95
FARP1-219ENST00000596580 IL1RAPL2Q9NP60 686 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 ARID4AP29374 1257 aaPredicted RBP9.14□□□□□ -0.95
FARP1-219ENST00000596580 ARHGEF5Q12774 1597 aa9.14□□□□□ -0.95
FARP1-219ENST00000596580 KRT86O43790 486 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 KIAA0753Q2KHM9 967 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 TDRD12Q587J7 1177 aaKnown RBP9.13□□□□□ -0.95
FARP1-219ENST00000596580 PODXL2Q9NZ53 605 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 CTAGE9A4FU28 777 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 ATP5DP30049 168 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 CCDC96Q2M329 555 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 GABPB2Q8TAK5 448 aaPredicted RBP9.13□□□□□ -0.95
FARP1-219ENST00000596580 RBM28Q9NW13 759 aaKnown RBP9.13□□□□□ -0.95
FARP1-219ENST00000596580 LRSAM1Q6UWE0 723 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 ZNF804AQ7Z570 1209 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 ABCC2Q92887 1545 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 COL17A1Q9UMD9 1497 aaPredicted RBP9.13□□□□□ -0.95
FARP1-219ENST00000596580 HSF2BPO75031 334 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 ZSCAN22P10073 491 aaPredicted RBP9.13□□□□□ -0.95
FARP1-219ENST00000596580 KRT222Q8N1A0 295 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 DRC1Q96MC2 740 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 KCNG1Q9UIX4 513 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 NCBP1Q09161 790 aaKnown RBP9.13□□□□□ -0.95
FARP1-219ENST00000596580 WTAPQ15007 396 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 SCLT1Q96NL6 688 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 BOLA2Q9H3K6 86 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 SPECC1Q5M775 1068 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 CFAP57Q96MR6 1250 aa9.13□□□□□ -0.95
FARP1-219ENST00000596580 SSX2IPQ9Y2D8 614 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 238.4 ms