RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 PCCAP05165 728 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-209ENST00000595803 KCNA3P22001 575 aa16.25■□□□□ 0.19
SHKBP1-209ENST00000595803 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
SHKBP1-209ENST00000595803 USPL1Q5W0Q7 1092 aa16.25■□□□□ 0.19
SHKBP1-209ENST00000595803 AFDNP55196 1824 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-209ENST00000595803 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-209ENST00000595803 PPP1R42Q7Z4L9 355 aa16.24■□□□□ 0.19
SHKBP1-209ENST00000595803 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-209ENST00000595803 DCTPP1Q9H773 170 aa16.24■□□□□ 0.19
SHKBP1-209ENST00000595803 MKRN1Q9UHC7 482 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-209ENST00000595803 NIP7Q9Y221 180 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHKBP1-209ENST00000595803 SRGAP3O43295 1099 aa16.23■□□□□ 0.19
SHKBP1-209ENST00000595803 CASP7P55210 303 aa16.23■□□□□ 0.19
SHKBP1-209ENST00000595803 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
SHKBP1-209ENST00000595803 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-209ENST00000595803 ZBTB47Q9UFB7 747 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-209ENST00000595803 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-209ENST00000595803 TRMT112Q9UI30 125 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-209ENST00000595803 NUP98P52948 1817 aa16.23■□□□□ 0.19
SHKBP1-209ENST00000595803 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
SHKBP1-209ENST00000595803 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-209ENST00000595803 SUSD4Q5VX71 490 aa16.22■□□□□ 0.19
SHKBP1-209ENST00000595803 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
SHKBP1-209ENST00000595803 ABHD8Q96I13 439 aa16.22■□□□□ 0.19
SHKBP1-209ENST00000595803 KAZALD1Q96I82 304 aa16.22■□□□□ 0.19
SHKBP1-209ENST00000595803 BICC1Q9H694 974 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-209ENST00000595803 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
SHKBP1-209ENST00000595803 ZC3H4Q9UPT8 1303 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 FAM177BA6PVY3 158 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 MTX1Q13505 466 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 POLA2Q14181 598 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 ANKRD45Q5TZF3 282 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 BICDL1Q6ZP65 573 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 BCL2L12Q9HB09 334 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
SHKBP1-209ENST00000595803 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
SHKBP1-209ENST00000595803 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-209ENST00000595803 CTCFP49711 727 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-209ENST00000595803 MLLT1Q03111 559 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-209ENST00000595803 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-209ENST00000595803 EPHA10Q5JZY3 1008 aa16.2■□□□□ 0.18
SHKBP1-209ENST00000595803 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
SHKBP1-209ENST00000595803 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
SHKBP1-209ENST00000595803 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 GLTPD2A6NH11 291 aa16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 SURF6O75683 361 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 FOXO4P98177 505 aa16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 RASSF7Q02833 373 aa16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 LMBR1LQ6UX01 489 aa16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 CHMP3Q9Y3E7 222 aa16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
SHKBP1-209ENST00000595803 CNTNAP1P78357 1384 aa16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 NUCB1Q02818 461 aa16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 RABL6Q3YEC7 729 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 HSP90AB4PQ58FF6 505 aa16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 AIDAQ96BJ3 306 aa16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 PLA2G12BQ9BX93 195 aa16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 ANKRD36CQ5JPF3 1778 aa16.18■□□□□ 0.18
SHKBP1-209ENST00000595803 APBB1O00213 710 aa16.17■□□□□ 0.18
SHKBP1-209ENST00000595803 PDE8AO60658 829 aa16.17■□□□□ 0.18
SHKBP1-209ENST00000595803 RAB11FIP3O75154 756 aa16.17■□□□□ 0.18
SHKBP1-209ENST00000595803 NYXQ9GZU5 481 aa16.17■□□□□ 0.18
SHKBP1-209ENST00000595803 GYS1P13807 737 aa16.16■□□□□ 0.18
SHKBP1-209ENST00000595803 LBX1P52954 281 aa16.16■□□□□ 0.18
SHKBP1-209ENST00000595803 G3BP1Q13283 466 aaKnown RBP eCLIP16.16■□□□□ 0.18
SHKBP1-209ENST00000595803 OS9Q13438 667 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-209ENST00000595803 TPTE2Q6XPS3 522 aa16.16■□□□□ 0.18
SHKBP1-209ENST00000595803 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
SHKBP1-209ENST00000595803 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
SHKBP1-209ENST00000595803 EXOC6BQ9Y2D4 811 aa16.16■□□□□ 0.18
SHKBP1-209ENST00000595803 NTSR2O95665 410 aa16.15■□□□□ 0.18
SHKBP1-209ENST00000595803 RGS3P49796 1198 aa16.15■□□□□ 0.18
SHKBP1-209ENST00000595803 NBPF5PQ86XG9 351 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-209ENST00000595803 LNPKQ9C0E8 428 aa16.15■□□□□ 0.18
SHKBP1-209ENST00000595803 NOP58Q9Y2X3 529 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-209ENST00000595803 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
SHKBP1-209ENST00000595803 NPHP1O15259 732 aa16.14■□□□□ 0.17
SHKBP1-209ENST00000595803 CSF1RP07333 972 aa16.14■□□□□ 0.17
SHKBP1-209ENST00000595803 CHRNA5P30532 468 aa16.14■□□□□ 0.17
SHKBP1-209ENST00000595803 NFIXQ14938 502 aa16.14■□□□□ 0.17
SHKBP1-209ENST00000595803 CCDC57Q2TAC2 916 aa16.14■□□□□ 0.17
SHKBP1-209ENST00000595803 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
SHKBP1-209ENST00000595803 POTECB2RU33 542 aa16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 HCLS1P14317 486 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 LMNB1P20700 586 aa16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 ERFEQ4G0M1 354 aa16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 ERC1Q8IUD2 1116 aa16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 COPRSQ9NQ92 184 aa16.13■□□□□ 0.17
SHKBP1-209ENST00000595803 PA2G4Q9UQ80 394 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms