RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 GRIPAP1Q4V328 841 aa18.88■□□□□ 0.61
USE1-205ENST00000594724 SP8Q8IXZ3 490 aa18.88■□□□□ 0.61
USE1-205ENST00000594724 CELF1Q92879 486 aaKnown RBP18.88■□□□□ 0.61
USE1-205ENST00000594724 TAF1P21675 1872 aa18.87■□□□□ 0.61
USE1-205ENST00000594724 DIEXFQ68CQ4 756 aaKnown RBP18.87■□□□□ 0.61
USE1-205ENST00000594724 ZNF541Q9H0D2 1346 aa18.86■□□□□ 0.61
USE1-205ENST00000594724 NEURL1BA8MQ27 555 aa18.86■□□□□ 0.61
USE1-205ENST00000594724 DNAAF4Q8WXU2 420 aa18.86■□□□□ 0.61
USE1-205ENST00000594724 FZD9O00144 591 aa18.85■□□□□ 0.61
USE1-205ENST00000594724 PDE8AO60658 829 aa18.85■□□□□ 0.61
USE1-205ENST00000594724 HSP90B1P14625 803 aaKnown RBP18.85■□□□□ 0.61
USE1-205ENST00000594724 DPP8Q6V1X1 898 aaPredicted RBP18.85■□□□□ 0.61
USE1-205ENST00000594724 MIER1Q8N108 512 aa18.85■□□□□ 0.61
USE1-205ENST00000594724 LARGE2Q8N3Y3 721 aa18.85■□□□□ 0.61
USE1-205ENST00000594724 MPNDQ8N594 471 aa18.85■□□□□ 0.61
USE1-205ENST00000594724 RBM46Q8TBY0 533 aaKnown RBP18.85■□□□□ 0.61
USE1-205ENST00000594724 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
USE1-205ENST00000594724 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
USE1-205ENST00000594724 CCDC85AQ96PX6 553 aaPredicted RBP18.85■□□□□ 0.61
USE1-205ENST00000594724 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
USE1-205ENST00000594724 E9PSI1 815 aa18.84■□□□□ 0.61
USE1-205ENST00000594724 F6X3S4 739 aa18.84■□□□□ 0.61
USE1-205ENST00000594724 SLFN5Q08AF3 891 aa18.84■□□□□ 0.61
USE1-205ENST00000594724 COL4A1P02462 1669 aa18.83■□□□□ 0.61
USE1-205ENST00000594724 COL4A5P29400 1685 aa18.83■□□□□ 0.61
USE1-205ENST00000594724 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.61
USE1-205ENST00000594724 PPIP5K2O43314 1243 aa18.83■□□□□ 0.6
USE1-205ENST00000594724 HSPA6P17066 643 aa18.83■□□□□ 0.6
USE1-205ENST00000594724 RPS8P62241 208 aaKnown RBP18.83■□□□□ 0.6
USE1-205ENST00000594724 AOC3Q16853 763 aa18.83■□□□□ 0.6
USE1-205ENST00000594724 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
USE1-205ENST00000594724 RTFDC1Q9BY42 306 aaPredicted RBP18.83■□□□□ 0.6
USE1-205ENST00000594724 H7C1W4 665 aa18.82■□□□□ 0.6
USE1-205ENST00000594724 GCKRQ14397 625 aa18.82■□□□□ 0.6
USE1-205ENST00000594724 CCDC152Q4G0S7 254 aa18.82■□□□□ 0.6
USE1-205ENST00000594724 UBE3BQ7Z3V4 1068 aa18.82■□□□□ 0.6
USE1-205ENST00000594724 SUPT20HQ8NEM7 779 aa18.82■□□□□ 0.6
USE1-205ENST00000594724 WDR90Q96KV7 1748 aa18.82■□□□□ 0.6
USE1-205ENST00000594724 LINS1Q8NG48 757 aa18.81■□□□□ 0.6
USE1-205ENST00000594724 NSFL1CQ9UNZ2 370 aaKnown RBP18.81■□□□□ 0.6
USE1-205ENST00000594724 CTSWP56202 376 aa18.8■□□□□ 0.6
USE1-205ENST00000594724 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
USE1-205ENST00000594724 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
USE1-205ENST00000594724 TTLL11Q8NHH1 800 aa18.8■□□□□ 0.6
USE1-205ENST00000594724 L3MBTL3Q96JM7 780 aaPredicted RBP18.8■□□□□ 0.6
USE1-205ENST00000594724 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
USE1-205ENST00000594724 CACNA1FO60840 1977 aa18.79■□□□□ 0.6
USE1-205ENST00000594724 CASP7P55210 303 aa18.79■□□□□ 0.6
USE1-205ENST00000594724 GPSM2P81274 684 aa18.79■□□□□ 0.6
USE1-205ENST00000594724 FSTL1Q12841 308 aa18.79■□□□□ 0.6
USE1-205ENST00000594724 BEND3Q5T5X7 828 aa18.79■□□□□ 0.6
USE1-205ENST00000594724 VPS33BQ9H267 617 aa18.79■□□□□ 0.6
USE1-205ENST00000594724 POTEIP0CG38 1075 aa18.78■□□□□ 0.6
USE1-205ENST00000594724 POTEJP0CG39 1038 aa18.78■□□□□ 0.6
USE1-205ENST00000594724 KIAA2012Q0VF49 1180 aa18.78■□□□□ 0.6
USE1-205ENST00000594724 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
USE1-205ENST00000594724 GPC2Q8N158 579 aa18.78■□□□□ 0.6
USE1-205ENST00000594724 MRPL50Q8N5N7 158 aaKnown RBP18.78■□□□□ 0.6
USE1-205ENST00000594724 SMC1BQ8NDV3 1235 aa18.78■□□□□ 0.6
USE1-205ENST00000594724 GREM2Q9H772 168 aa18.78■□□□□ 0.6
USE1-205ENST00000594724 POLLQ9UGP5 575 aa18.78■□□□□ 0.6
USE1-205ENST00000594724 IQCA1LA6NCM1 817 aa18.77■□□□□ 0.6
USE1-205ENST00000594724 C6orf229H3BNL8 230 aa18.77■□□□□ 0.6
USE1-205ENST00000594724 SLC4A10Q6U841 1118 aa18.77■□□□□ 0.6
USE1-205ENST00000594724 ANKRD18AQ8IVF6 992 aa18.77■□□□□ 0.6
USE1-205ENST00000594724 RIMBP2O15034 1052 aa18.76■□□□□ 0.59
USE1-205ENST00000594724 SSH1Q8WYL5 1049 aa18.76■□□□□ 0.59
USE1-205ENST00000594724 TAF1DQ9H5J8 278 aaPredicted RBP18.76■□□□□ 0.59
USE1-205ENST00000594724 ZNRF3Q9ULT6 936 aa18.76■□□□□ 0.59
USE1-205ENST00000594724 LRRC37AA6NMS7 1700 aa18.75■□□□□ 0.59
USE1-205ENST00000594724 CXCL9Q07325 125 aa18.75■□□□□ 0.59
USE1-205ENST00000594724 WASHC4Q2M389 1173 aa18.75■□□□□ 0.59
USE1-205ENST00000594724 GPR101Q96P66 508 aaPredicted RBP18.75■□□□□ 0.59
USE1-205ENST00000594724 PLA2G12BQ9BX93 195 aa18.75■□□□□ 0.59
USE1-205ENST00000594724 BCL2L13Q9BXK5 485 aa18.75■□□□□ 0.59
USE1-205ENST00000594724 HACL1Q9UJ83 578 aa18.75■□□□□ 0.59
USE1-205ENST00000594724 DUOX1Q9NRD9 1551 aa18.75■□□□□ 0.59
USE1-205ENST00000594724 APLP1P51693 650 aa18.74■□□□□ 0.59
USE1-205ENST00000594724 TBC1D16Q8TBP0 767 aa18.74■□□□□ 0.59
USE1-205ENST00000594724 CDC5LQ99459 802 aaKnown RBP18.74■□□□□ 0.59
USE1-205ENST00000594724 ANKIB1Q9P2G1 1089 aa18.74■□□□□ 0.59
USE1-205ENST00000594724 YDJCA8MPS7 323 aa18.73■□□□□ 0.59
USE1-205ENST00000594724 RAD17O75943 681 aa18.73■□□□□ 0.59
USE1-205ENST00000594724 EPHX2P34913 555 aa18.73■□□□□ 0.59
USE1-205ENST00000594724 EAPPQ56P03 285 aaPredicted RBP18.73■□□□□ 0.59
USE1-205ENST00000594724 PODXL2Q9NZ53 605 aa18.73■□□□□ 0.59
USE1-205ENST00000594724 UFL1O94874 794 aa18.72■□□□□ 0.59
USE1-205ENST00000594724 CSF1RP07333 972 aa18.72■□□□□ 0.59
USE1-205ENST00000594724 EPS15P42566 896 aa18.72■□□□□ 0.59
USE1-205ENST00000594724 SCNN1DP51172 638 aa18.72■□□□□ 0.59
USE1-205ENST00000594724 HTRA3P83110 453 aa18.72■□□□□ 0.59
USE1-205ENST00000594724 CHADLQ6NUI6 762 aa18.72■□□□□ 0.59
USE1-205ENST00000594724 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
USE1-205ENST00000594724 DBNDD1Q9H9R9 158 aa18.72■□□□□ 0.59
USE1-205ENST00000594724 RTL9Q8NET4 1388 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 GRM8O00222 908 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 ALDH1L1O75891 902 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 ITGA6P23229 1130 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 FOXO4P98177 505 aa18.71■□□□□ 0.59
USE1-205ENST00000594724 DOK7Q18PE1 504 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms