RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 RBM26Q5T8P6 1007 aaKnown RBP16.26■□□□□ 0.19
ZNF558-202ENST00000593891 MRC1P22897 1456 aa16.25■□□□□ 0.19
ZNF558-202ENST00000593891 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
ZNF558-202ENST00000593891 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
ZNF558-202ENST00000593891 ZNF333Q96JL9 665 aa16.25■□□□□ 0.19
ZNF558-202ENST00000593891 TESK2Q96S53 571 aa16.25■□□□□ 0.19
ZNF558-202ENST00000593891 NR2E3Q9Y5X4 410 aa16.25■□□□□ 0.19
ZNF558-202ENST00000593891 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
ZNF558-202ENST00000593891 EFCC1Q9HA90 598 aa16.24■□□□□ 0.19
ZNF558-202ENST00000593891 KIF7Q2M1P5 1343 aa16.23■□□□□ 0.19
ZNF558-202ENST00000593891 BRCA2P51587 3418 aa16.23■□□□□ 0.19
ZNF558-202ENST00000593891 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
ZNF558-202ENST00000593891 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
ZNF558-202ENST00000593891 UBE2Q2LH0YL09 131 aa16.22■□□□□ 0.19
ZNF558-202ENST00000593891 EGFRP00533 1210 aa16.22■□□□□ 0.19
ZNF558-202ENST00000593891 PLA2G5P39877 138 aa16.22■□□□□ 0.19
ZNF558-202ENST00000593891 KIAA2012Q0VF49 1180 aa16.22■□□□□ 0.19
ZNF558-202ENST00000593891 MKRN3Q13064 507 aaKnown RBP16.22■□□□□ 0.19
ZNF558-202ENST00000593891 FAM122AQ96E09 287 aa16.22■□□□□ 0.19
ZNF558-202ENST00000593891 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
ZNF558-202ENST00000593891 RTFDC1Q9BY42 306 aaPredicted RBP16.22■□□□□ 0.19
ZNF558-202ENST00000593891 GGA3Q9NZ52 723 aa16.22■□□□□ 0.19
ZNF558-202ENST00000593891 ERBB4Q15303 1308 aa16.21■□□□□ 0.19
ZNF558-202ENST00000593891 SLC9C1Q4G0N8 1177 aa16.21■□□□□ 0.19
ZNF558-202ENST00000593891 HTATIP2Q9BUP3 242 aa16.21■□□□□ 0.19
ZNF558-202ENST00000593891 HTTP42858 3142 aa16.21■□□□□ 0.19
ZNF558-202ENST00000593891 HEG1Q9ULI3 1381 aa16.21■□□□□ 0.19
ZNF558-202ENST00000593891 KIF20BQ96Q89 1820 aa16.2■□□□□ 0.18
ZNF558-202ENST00000593891 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
ZNF558-202ENST00000593891 RGL2O15211 777 aa16.2■□□□□ 0.18
ZNF558-202ENST00000593891 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
ZNF558-202ENST00000593891 DPP8Q6V1X1 898 aaPredicted RBP16.2■□□□□ 0.18
ZNF558-202ENST00000593891 CD99L2Q8TCZ2 262 aa16.2■□□□□ 0.18
ZNF558-202ENST00000593891 CARD14Q9BXL6 1004 aa16.2■□□□□ 0.18
ZNF558-202ENST00000593891 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
ZNF558-202ENST00000593891 ATP6V0A2Q9Y487 856 aa16.2■□□□□ 0.18
ZNF558-202ENST00000593891 UNC80Q8N2C7 3258 aa16.2■□□□□ 0.18
ZNF558-202ENST00000593891 RPS12P25398 132 aaKnown RBP16.19■□□□□ 0.18
ZNF558-202ENST00000593891 TCIRG1Q13488 830 aa16.19■□□□□ 0.18
ZNF558-202ENST00000593891 KIF4BQ2VIQ3 1234 aa16.19■□□□□ 0.18
ZNF558-202ENST00000593891 MOB2Q70IA6 237 aa16.19■□□□□ 0.18
ZNF558-202ENST00000593891 SLC51AQ86UW1 340 aa16.19■□□□□ 0.18
ZNF558-202ENST00000593891 INHBEP58166 350 aa16.18■□□□□ 0.18
ZNF558-202ENST00000593891 TTLL12Q14166 644 aaPredicted RBP16.18■□□□□ 0.18
ZNF558-202ENST00000593891 Q7L0L9 218 aa16.18■□□□□ 0.18
ZNF558-202ENST00000593891 MTMR10Q9NXD2 777 aa16.18■□□□□ 0.18
ZNF558-202ENST00000593891 YDJCA8MPS7 323 aa16.17■□□□□ 0.18
ZNF558-202ENST00000593891 MYCP01106 439 aaPredicted RBP16.17■□□□□ 0.18
ZNF558-202ENST00000593891 ARHGEF6Q15052 776 aa16.17■□□□□ 0.18
ZNF558-202ENST00000593891 PSMD14O00487 310 aa16.16■□□□□ 0.18
ZNF558-202ENST00000593891 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
ZNF558-202ENST00000593891 ZNF790Q6PG37 636 aa16.16■□□□□ 0.18
ZNF558-202ENST00000593891 NUTM1Q86Y26 1132 aa16.16■□□□□ 0.18
ZNF558-202ENST00000593891 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
ZNF558-202ENST00000593891 ZNF609O15014 1411 aa16.15■□□□□ 0.18
ZNF558-202ENST00000593891 NEUROD1Q13562 356 aa16.15■□□□□ 0.18
ZNF558-202ENST00000593891 CENPFP49454 3210 aa16.15■□□□□ 0.18
ZNF558-202ENST00000593891 ABCC12Q96J65 1359 aa16.14■□□□□ 0.17
ZNF558-202ENST00000593891 RIC1Q4ADV7 1423 aa16.14■□□□□ 0.17
ZNF558-202ENST00000593891 ANGEL2Q5VTE6 544 aaKnown RBP16.14■□□□□ 0.17
ZNF558-202ENST00000593891 IFNL1Q8IU54 200 aa16.14■□□□□ 0.17
ZNF558-202ENST00000593891 ASTN2O75129 1339 aaPredicted RBP16.14■□□□□ 0.17
ZNF558-202ENST00000593891 MANSC4A6NHS7 340 aaPredicted RBP16.13■□□□□ 0.17
ZNF558-202ENST00000593891 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
ZNF558-202ENST00000593891 PIP4K2AP48426 406 aaPredicted RBP16.13■□□□□ 0.17
ZNF558-202ENST00000593891 SP3Q02447 781 aa16.13■□□□□ 0.17
ZNF558-202ENST00000593891 SIN3AQ96ST3 1273 aa16.13■□□□□ 0.17
ZNF558-202ENST00000593891 SCARF1Q14162 830 aa16.12■□□□□ 0.17
ZNF558-202ENST00000593891 STAP2Q9UGK3 403 aa16.12■□□□□ 0.17
ZNF558-202ENST00000593891 RAPGEFL1Q9UHV5 662 aa16.12■□□□□ 0.17
ZNF558-202ENST00000593891 NF2P35240 595 aa16.11■□□□□ 0.17
ZNF558-202ENST00000593891 TEFQ10587 303 aa16.11■□□□□ 0.17
ZNF558-202ENST00000593891 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
ZNF558-202ENST00000593891 SPRYD7Q5W111 196 aa16.11■□□□□ 0.17
ZNF558-202ENST00000593891 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
ZNF558-202ENST00000593891 PTCH2Q9Y6C5 1203 aa16.11■□□□□ 0.17
ZNF558-202ENST00000593891 LAMA3Q16787 3333 aa16.11■□□□□ 0.17
ZNF558-202ENST00000593891 BBOX1O75936 387 aa16.1■□□□□ 0.17
ZNF558-202ENST00000593891 OTUD7BQ6GQQ9 843 aa16.1■□□□□ 0.17
ZNF558-202ENST00000593891 NKX2-3Q8TAU0 364 aa16.1■□□□□ 0.17
ZNF558-202ENST00000593891 SYMPKQ92797 1274 aaKnown RBP16.1■□□□□ 0.17
ZNF558-202ENST00000593891 HLFQ16534 295 aa16.09■□□□□ 0.17
ZNF558-202ENST00000593891 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
ZNF558-202ENST00000593891 UBR2Q8IWV8 1755 aa16.08■□□□□ 0.17
ZNF558-202ENST00000593891 POLR2AP24928 1970 aaKnown RBP16.08■□□□□ 0.16
ZNF558-202ENST00000593891 PTPN12Q05209 780 aaKnown RBP16.08■□□□□ 0.16
ZNF558-202ENST00000593891 ARMC9Q7Z3E5 817 aa16.08■□□□□ 0.16
ZNF558-202ENST00000593891 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
ZNF558-202ENST00000593891 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
ZNF558-202ENST00000593891 VCANP13611 3396 aa16.07■□□□□ 0.16
ZNF558-202ENST00000593891 EVI5O60447 810 aa16.07■□□□□ 0.16
ZNF558-202ENST00000593891 CRHR2Q13324 411 aa16.07■□□□□ 0.16
ZNF558-202ENST00000593891 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
ZNF558-202ENST00000593891 SH3TC2Q8TF17 1288 aa16.07■□□□□ 0.16
ZNF558-202ENST00000593891 DBNDD1Q9H9R9 158 aa16.07■□□□□ 0.16
ZNF558-202ENST00000593891 IGF2BP3O00425 579 aaKnown RBP eCLIP16.06■□□□□ 0.16
ZNF558-202ENST00000593891 BMP8BP34820 402 aa16.06■□□□□ 0.16
ZNF558-202ENST00000593891 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
ZNF558-202ENST00000593891 PRAMEF18Q5VWM3 479 aa16.06■□□□□ 0.16
ZNF558-202ENST00000593891 SHISA4Q96DD7 197 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms