RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 MS4A1P11836 297 aa15.07■□□□□ 0
DDX39A-219ENST00000592927 SOGA3Q5TF21 947 aa15.07■□□□□ 0
DDX39A-219ENST00000592927 CST9Q5W186 159 aa15.07■□□□□ 0
DDX39A-219ENST00000592927 KSR2Q6VAB6 950 aa15.07■□□□□ 0
DDX39A-219ENST00000592927 GIGYF2Q6Y7W6 1299 aaKnown RBP15.07■□□□□ 0
DDX39A-219ENST00000592927 CNKSR1Q969H4 720 aa15.07■□□□□ 0
DDX39A-219ENST00000592927 PDE4DIPQ5VU43 2346 aa15.07■□□□□ 0
DDX39A-219ENST00000592927 SCN4AP35499 1836 aa15.07■□□□□ 0
DDX39A-219ENST00000592927 AFDNP55196 1824 aaKnown RBP15.07■□□□□ 0
DDX39A-219ENST00000592927 DICER1Q9UPY3 1922 aaKnown RBP15.07■□□□□ 0
DDX39A-219ENST00000592927 THSD7BQ9C0I4 1608 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 PI4KAP2A4QPH2 592 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 PDE3AQ14432 1141 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 HSP90AB3PQ58FF7 597 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 TBC1D9BQ66K14 1250 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 PRPF40BQ6NWY9 871 aaKnown RBP15.06■□□□□ 0
DDX39A-219ENST00000592927 PI4KAP1Q8N8J0 262 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 SETDB2Q96T68 719 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 TLL2Q9Y6L7 1015 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 KIF16BQ96L93 1317 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 ADAMTSL1Q8N6G6 1762 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
DDX39A-219ENST00000592927 IRX6P78412 446 aaPredicted RBP15.05■□□□□ -0
DDX39A-219ENST00000592927 NIP7Q9Y221 180 aaKnown RBP eCLIP15.05■□□□□ -0
DDX39A-219ENST00000592927 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
DDX39A-219ENST00000592927 PTPRCP08575 1304 aa15.05■□□□□ -0
DDX39A-219ENST00000592927 SCN7AQ01118 1682 aa15.05■□□□□ -0
DDX39A-219ENST00000592927 LTBP1Q14766 1721 aa15.05■□□□□ -0
DDX39A-219ENST00000592927 TRAF5O00463 557 aa15.04■□□□□ -0
DDX39A-219ENST00000592927 IPO8O15397 1037 aaKnown RBP15.04■□□□□ -0
DDX39A-219ENST00000592927 TCIRG1Q13488 830 aa15.04■□□□□ -0
DDX39A-219ENST00000592927 PRR5LQ6MZQ0 368 aa15.04■□□□□ -0
DDX39A-219ENST00000592927 ZNF277Q9NRM2 450 aaPredicted RBP15.04■□□□□ -0
DDX39A-219ENST00000592927 PLIN1O60240 522 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 GPTP24298 496 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 NEXNQ0ZGT2 675 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 ZKSCAN2Q63HK3 967 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 STYK1Q6J9G0 422 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 ZNF34Q8IZ26 560 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 DNAAF4Q8WXU2 420 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 MYD88Q99836 296 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 METTL22Q9BUU2 404 aaPredicted RBP15.03■□□□□ -0
DDX39A-219ENST00000592927 NOB1Q9ULX3 412 aaKnown RBP15.03■□□□□ -0
DDX39A-219ENST00000592927 BCORQ6W2J9 1755 aa15.03■□□□□ -0
DDX39A-219ENST00000592927 F6X3S4 739 aa15.02■□□□□ -0
DDX39A-219ENST00000592927 SRGNP10124 158 aa15.02■□□□□ -0
DDX39A-219ENST00000592927 FKBP4Q02790 459 aaKnown RBP eCLIP15.02■□□□□ -0
DDX39A-219ENST00000592927 CIAPIN1Q6FI81 312 aa15.02■□□□□ -0
DDX39A-219ENST00000592927 GPC2Q8N158 579 aa15.02■□□□□ -0
DDX39A-219ENST00000592927 C7orf43Q8WVR3 580 aa15.02■□□□□ -0
DDX39A-219ENST00000592927 ARHGAP45Q92619 1136 aa15.02■□□□□ -0
DDX39A-219ENST00000592927 PPP4R2Q9NY27 417 aa15.02■□□□□ -0
DDX39A-219ENST00000592927 ATP5J2-PTCD1G3V325 749 aa15.01□□□□□ -0.01
DDX39A-219ENST00000592927 FZD9O00144 591 aa15.01□□□□□ -0.01
DDX39A-219ENST00000592927 PARP10Q53GL7 1025 aa15.01□□□□□ -0.01
DDX39A-219ENST00000592927 CCDC93Q567U6 631 aa15.01□□□□□ -0.01
DDX39A-219ENST00000592927 NBPF5PQ86XG9 351 aaPredicted RBP15.01□□□□□ -0.01
DDX39A-219ENST00000592927 FRAT1Q92837 279 aaPredicted RBP15.01□□□□□ -0.01
DDX39A-219ENST00000592927 MASTLQ96GX5 879 aa15.01□□□□□ -0.01
DDX39A-219ENST00000592927 ISCA1Q9BUE6 129 aa15.01□□□□□ -0.01
DDX39A-219ENST00000592927 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
DDX39A-219ENST00000592927 FAM177BA6PVY3 158 aa15□□□□□ -0.01
DDX39A-219ENST00000592927 NPHP1O15259 732 aa15□□□□□ -0.01
DDX39A-219ENST00000592927 TRIM28Q13263 835 aaKnown RBP15□□□□□ -0.01
DDX39A-219ENST00000592927 SLC4A10Q6U841 1118 aa15□□□□□ -0.01
DDX39A-219ENST00000592927 PPP1R42Q7Z4L9 355 aa15□□□□□ -0.01
DDX39A-219ENST00000592927 SAPCD2Q86UD0 394 aa15□□□□□ -0.01
DDX39A-219ENST00000592927 NLRP10Q86W26 655 aa15□□□□□ -0.01
DDX39A-219ENST00000592927 UBN2Q6ZU65 1347 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 CASP8AP2Q9UKL3 1982 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 GTF2E1P29083 439 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-219ENST00000592927 AAMPQ13685 434 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 SUSD4Q5VX71 490 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 ATF7IPQ6VMQ6 1270 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 TPTE2Q6XPS3 522 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 GCC1Q96CN9 775 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 NYXQ9GZU5 481 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 GJA3Q9Y6H8 435 aa14.99□□□□□ -0.01
DDX39A-219ENST00000592927 EPS15P42566 896 aa14.98□□□□□ -0.01
DDX39A-219ENST00000592927 OLFM4Q6UX06 510 aa14.98□□□□□ -0.01
DDX39A-219ENST00000592927 CNBD1Q8NA66 436 aa14.98□□□□□ -0.01
DDX39A-219ENST00000592927 CCDC191Q8NCU4 936 aa14.98□□□□□ -0.01
DDX39A-219ENST00000592927 LINS1Q8NG48 757 aa14.98□□□□□ -0.01
DDX39A-219ENST00000592927 CRBNQ96SW2 442 aa14.98□□□□□ -0.01
DDX39A-219ENST00000592927 UTP14AQ9BVJ6 771 aaKnown RBP14.98□□□□□ -0.01
DDX39A-219ENST00000592927 CWC25Q9NXE8 425 aaPredicted RBP14.98□□□□□ -0.01
DDX39A-219ENST00000592927 NUP98P52948 1817 aa14.97□□□□□ -0.01
DDX39A-219ENST00000592927 SLX4Q8IY92 1834 aa14.97□□□□□ -0.01
DDX39A-219ENST00000592927 IGKV5-2P06315 115 aa14.97□□□□□ -0.01
DDX39A-219ENST00000592927 LMOD1P29536 600 aaPredicted RBP14.97□□□□□ -0.01
DDX39A-219ENST00000592927 IARSP41252 1262 aaKnown RBP14.97□□□□□ -0.01
DDX39A-219ENST00000592927 ST5P78524 1137 aa14.97□□□□□ -0.01
DDX39A-219ENST00000592927 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
DDX39A-219ENST00000592927 HABP4Q5JVS0 413 aaKnown RBP14.97□□□□□ -0.01
DDX39A-219ENST00000592927 BEND3Q5T5X7 828 aa14.97□□□□□ -0.01
DDX39A-219ENST00000592927 C20orf194Q5TEA3 1177 aa14.97□□□□□ -0.01
DDX39A-219ENST00000592927 FTSJ3Q8IY81 847 aaKnown RBP14.97□□□□□ -0.01
DDX39A-219ENST00000592927 DZIP1LQ8IYY4 767 aaKnown RBP14.97□□□□□ -0.01
DDX39A-219ENST00000592927 EXOC6Q8TAG9 804 aa14.97□□□□□ -0.01
DDX39A-219ENST00000592927 ZIC5Q96T25 663 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms