RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TAF3Q5VWG9 929 aa14.73□□□□□ -0.05
DNMT1-228ENST00000592705 VTI1AQ96AJ9 217 aa14.73□□□□□ -0.05
DNMT1-228ENST00000592705 GUCY1B3Q02153 619 aa14.72□□□□□ -0.05
DNMT1-228ENST00000592705 TSPYL6Q8N831 410 aa14.72□□□□□ -0.05
DNMT1-228ENST00000592705 EIF4A2Q14240 407 aaKnown RBP14.72□□□□□ -0.05
DNMT1-228ENST00000592705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.72□□□□□ -0.052e-6■■■■■ 66.3
DNMT1-228ENST00000592705 KAT6BQ8WYB5 2073 aa14.72□□□□□ -0.05
DNMT1-228ENST00000592705 MINDY4BA8MYZ0 360 aa14.72□□□□□ -0.05
DNMT1-228ENST00000592705 ZGPATQ8N5A5 531 aaKnown RBP14.72□□□□□ -0.05
DNMT1-228ENST00000592705 C16orf45Q96MC5 204 aaPredicted RBP14.72□□□□□ -0.05
DNMT1-228ENST00000592705 NSFL1CQ9UNZ2 370 aaKnown RBP14.72□□□□□ -0.05
DNMT1-228ENST00000592705 TRIM21P19474 475 aaKnown RBP14.72□□□□□ -0.05
DNMT1-228ENST00000592705 VEZTQ9HBM0 779 aa14.72□□□□□ -0.05
DNMT1-228ENST00000592705 SEC63Q9UGP8 760 aaKnown RBP14.72□□□□□ -0.05
DNMT1-228ENST00000592705 ZBTB7BO15156 539 aaPredicted RBP14.71□□□□□ -0.05
DNMT1-228ENST00000592705 PPP4R3AQ6IN85 833 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 ANKRD13DQ6ZTN6 518 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 INTS4Q96HW7 963 aaKnown RBP14.71□□□□□ -0.05
DNMT1-228ENST00000592705 GBP3Q9H0R5 595 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 PHAXQ9H814 394 aaKnown RBP14.71□□□□□ -0.05
DNMT1-228ENST00000592705 ZNF408Q9H9D4 720 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 CNPY2Q9Y2B0 182 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 ZKSCAN5Q9Y2L8 839 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 GOLGA8BA8MQT2 603 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 ATP5J2-PTCD1G3V325 749 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 CCT2P78371 535 aaKnown RBP14.71□□□□□ -0.05
DNMT1-228ENST00000592705 CBX1P83916 185 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 CUL5Q93034 780 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 USP26Q9BXU7 913 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 ABCC1P33527 1531 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 TNNI2P48788 182 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 GIMAP6Q6P9H5 292 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 NAPBQ9H115 298 aa14.71□□□□□ -0.05
DNMT1-228ENST00000592705 ALDH1L1O75891 902 aa14.71□□□□□ -0.06
DNMT1-228ENST00000592705 ZNF804AQ7Z570 1209 aa14.71□□□□□ -0.06
DNMT1-228ENST00000592705 F13A1P00488 732 aa14.7□□□□□ -0.06
DNMT1-228ENST00000592705 RBM17Q96I25 401 aaKnown RBP14.7□□□□□ -0.06
DNMT1-228ENST00000592705 EHMT1Q9H9B1 1298 aa14.7□□□□□ -0.06
DNMT1-228ENST00000592705 CASQ1P31415 396 aa14.7□□□□□ -0.06
DNMT1-228ENST00000592705 PDE6BP35913 854 aa14.7□□□□□ -0.06
DNMT1-228ENST00000592705 PAXBP1Q9Y5B6 917 aa14.7□□□□□ -0.06
DNMT1-228ENST00000592705 YEATS2Q9ULM3 1422 aa14.7□□□□□ -0.06
DNMT1-228ENST00000592705 PATL2C9JE40 543 aaKnown RBP14.7□□□□□ -0.06
DNMT1-228ENST00000592705 PRIM1P49642 420 aaKnown RBP14.7□□□□□ -0.06
DNMT1-228ENST00000592705 CCDC148Q8NFR7 591 aa14.7□□□□□ -0.06
DNMT1-228ENST00000592705 ADGBQ8N7X0 1667 aa14.7□□□□□ -0.06
DNMT1-228ENST00000592705 FAM196AQ6ZSG2 479 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 TANGO6Q9C0B7 1094 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 SLC12A7Q9Y666 1083 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 NPATQ14207 1427 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 ZFYVE16Q7Z3T8 1539 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 GOLGA6L10A6NI86 522 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 FAM200AQ8TCP9 573 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 BCS1LQ9Y276 419 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 TTC41PQ6P2S7 1318 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 CEP170Q5SW79 1584 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 GOLIM4O00461 696 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 CNNM3Q8NE01 707 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 KIF5CO60282 957 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 URI1O94763 535 aaPredicted RBP14.69□□□□□ -0.06
DNMT1-228ENST00000592705 ERLIN2O94905 339 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 EIF5P55010 431 aaKnown RBP14.69□□□□□ -0.06
DNMT1-228ENST00000592705 SSRP1Q08945 709 aaKnown RBP14.69□□□□□ -0.06
DNMT1-228ENST00000592705 CHPF2Q9P2E5 772 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 NOLC1Q14978 699 aaKnown RBP eCLIP14.69□□□□□ -0.067e-9■■■■□ 21.9
DNMT1-228ENST00000592705 UBE3BQ7Z3V4 1068 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 PHACTR3Q96KR7 559 aa14.69□□□□□ -0.06
DNMT1-228ENST00000592705 RBM8AQ9Y5S9 174 aaKnown RBP14.69□□□□□ -0.06
DNMT1-228ENST00000592705 DNAI2Q9GZS0 605 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 BMP2KQ9NSY1 1161 aaPredicted RBP14.68□□□□□ -0.06
DNMT1-228ENST00000592705 SLC39A6Q13433 755 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 KIAA1328Q86T90 577 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 FLT4P35916 1363 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 GOLGA8AA7E2F4 631 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 ZFYVE27Q5T4F4 411 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 NECAB1Q8N987 351 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 CCDC150Q8NCX0 1101 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 ZHX3Q9H4I2 956 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 IQCA1Q86XH1 822 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 SUPT20HQ8NEM7 779 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 RNF41Q9H4P4 317 aaPredicted RBP14.68□□□□□ -0.06
DNMT1-228ENST00000592705 TRMT1Q9NXH9 659 aaKnown RBP14.68□□□□□ -0.06
DNMT1-228ENST00000592705 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
DNMT1-228ENST00000592705 SOS1Q07889 1333 aaPredicted RBP14.67□□□□□ -0.06
DNMT1-228ENST00000592705 F8W031 263 aaPredicted RBP14.67□□□□□ -0.06
DNMT1-228ENST00000592705 TMC6Q7Z403 805 aa14.67□□□□□ -0.06
DNMT1-228ENST00000592705 CCDC171Q6TFL3 1326 aa14.67□□□□□ -0.06
DNMT1-228ENST00000592705 TTF1Q15361 905 aaPredicted RBP14.67□□□□□ -0.06
DNMT1-228ENST00000592705 LARGE2Q8N3Y3 721 aa14.67□□□□□ -0.06
DNMT1-228ENST00000592705 ZNF397Q8NF99 534 aaPredicted RBP14.67□□□□□ -0.06
DNMT1-228ENST00000592705 IP6K1Q92551 441 aa14.67□□□□□ -0.06
DNMT1-228ENST00000592705 CCDC102AQ96A19 550 aa14.67□□□□□ -0.06
DNMT1-228ENST00000592705 TMEM2Q9UHN6 1383 aa14.67□□□□□ -0.06
DNMT1-228ENST00000592705 B4DLN1 442 aa14.67□□□□□ -0.06
DNMT1-228ENST00000592705 MRPL12P52815 198 aaKnown RBP14.67□□□□□ -0.06
DNMT1-228ENST00000592705 MTHFSDQ2M296 383 aaKnown RBP14.67□□□□□ -0.06
DNMT1-228ENST00000592705 PPP4R3BQ5MIZ7 849 aa14.67□□□□□ -0.06
DNMT1-228ENST00000592705 ORC3Q9UBD5 711 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms