RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 SP8Q8IXZ3 490 aa25.87■■□□□ 1.73
PRKCSH-216ENST00000592445 BRPF1P55201 1214 aaPredicted RBP25.86■■□□□ 1.73
PRKCSH-216ENST00000592445 ZC3H15Q8WU90 426 aaKnown RBP25.86■■□□□ 1.73
PRKCSH-216ENST00000592445 PLEKHF1Q96S99 279 aa25.86■■□□□ 1.73
PRKCSH-216ENST00000592445 PGAP2Q9UHJ9 254 aa25.86■■□□□ 1.73
PRKCSH-216ENST00000592445 TSPYL4Q9UJ04 414 aa25.86■■□□□ 1.73
PRKCSH-216ENST00000592445 CDHR2Q9BYE9 1310 aa25.86■■□□□ 1.73
PRKCSH-216ENST00000592445 MAPK8IP3Q9UPT6 1336 aa25.86■■□□□ 1.73
PRKCSH-216ENST00000592445 KIAA2012Q0VF49 1180 aa25.85■■□□□ 1.73
PRKCSH-216ENST00000592445 CDC37L1Q7L3B6 337 aa25.85■■□□□ 1.73
PRKCSH-216ENST00000592445 MCOLN1Q9GZU1 580 aa25.85■■□□□ 1.73
PRKCSH-216ENST00000592445 DDX46Q7L014 1031 aaKnown RBP25.84■■□□□ 1.73
PRKCSH-216ENST00000592445 HCLS1P14317 486 aaPredicted RBP25.83■■□□□ 1.73
PRKCSH-216ENST00000592445 HIRAP54198 1017 aaPredicted RBP25.83■■□□□ 1.73
PRKCSH-216ENST00000592445 PNNQ9H307 717 aaKnown RBP25.83■■□□□ 1.73
PRKCSH-216ENST00000592445 CNOT7Q9UIV1 285 aaKnown RBP25.83■■□□□ 1.73
PRKCSH-216ENST00000592445 H7C1D1 291 aa25.82■■□□□ 1.72
PRKCSH-216ENST00000592445 ANXA1P04083 346 aa25.82■■□□□ 1.72
PRKCSH-216ENST00000592445 PDIA6Q15084 440 aa25.82■■□□□ 1.72
PRKCSH-216ENST00000592445 PROSER3Q2NL68 480 aa25.82■■□□□ 1.72
PRKCSH-216ENST00000592445 HSP90AB3PQ58FF7 597 aa25.82■■□□□ 1.72
PRKCSH-216ENST00000592445 LRP10Q7Z4F1 713 aa25.82■■□□□ 1.72
PRKCSH-216ENST00000592445 TRPM4Q8TD43 1214 aa25.82■■□□□ 1.72
PRKCSH-216ENST00000592445 DGKZQ13574 1117 aa25.8■■□□□ 1.72
PRKCSH-216ENST00000592445 GRAPQ13588 217 aa25.8■■□□□ 1.72
PRKCSH-216ENST00000592445 GRAPLQ8TC17 118 aaPredicted RBP25.8■■□□□ 1.72
PRKCSH-216ENST00000592445 TRMT112Q9UI30 125 aaKnown RBP25.8■■□□□ 1.72
PRKCSH-216ENST00000592445 SHTN1A0MZ66 631 aa25.79■■□□□ 1.72
PRKCSH-216ENST00000592445 HUNKP57058 714 aa25.79■■□□□ 1.72
PRKCSH-216ENST00000592445 AIMP1Q12904 312 aaKnown RBP25.79■■□□□ 1.72
PRKCSH-216ENST00000592445 NOGQ13253 232 aa25.79■■□□□ 1.72
PRKCSH-216ENST00000592445 COPS6Q7L5N1 327 aa25.79■■□□□ 1.72
PRKCSH-216ENST00000592445 USP48Q86UV5 1035 aa25.79■■□□□ 1.72
PRKCSH-216ENST00000592445 NLRP10Q86W26 655 aa25.79■■□□□ 1.72
PRKCSH-216ENST00000592445 MICALL2Q8IY33 904 aa25.79■■□□□ 1.72
PRKCSH-216ENST00000592445 YDJCA8MPS7 323 aa25.78■■□□□ 1.72
PRKCSH-216ENST00000592445 SH3TC1Q8TE82 1336 aa25.78■■□□□ 1.72
PRKCSH-216ENST00000592445 CASP8AP2Q9UKL3 1982 aa25.77■■□□□ 1.72
PRKCSH-216ENST00000592445 NECTIN2Q92692 538 aa25.77■■□□□ 1.72
PRKCSH-216ENST00000592445 TCIRG1Q13488 830 aa25.76■■□□□ 1.71
PRKCSH-216ENST00000592445 TMC4Q7Z404 712 aa25.76■■□□□ 1.71
PRKCSH-216ENST00000592445 XAGE3Q8WTP9 111 aa25.76■■□□□ 1.71
PRKCSH-216ENST00000592445 ZBTB12Q9Y330 459 aaPredicted RBP25.76■■□□□ 1.71
PRKCSH-216ENST00000592445 LAMB2P55268 1798 aa25.75■■□□□ 1.71
PRKCSH-216ENST00000592445 ZIC5Q96T25 663 aa25.75■■□□□ 1.71
PRKCSH-216ENST00000592445 ANKRD36CQ5JPF3 1778 aa25.74■■□□□ 1.71
PRKCSH-216ENST00000592445 RIPK4P57078 832 aa25.74■■□□□ 1.71
PRKCSH-216ENST00000592445 WASHC4Q2M389 1173 aa25.74■■□□□ 1.71
PRKCSH-216ENST00000592445 SAMD7Q7Z3H4 446 aa25.74■■□□□ 1.71
PRKCSH-216ENST00000592445 DLK2Q6UY11 383 aa25.73■■□□□ 1.71
PRKCSH-216ENST00000592445 KRT26Q7Z3Y9 468 aa25.73■■□□□ 1.71
PRKCSH-216ENST00000592445 DPF2Q92785 391 aa25.73■■□□□ 1.71
PRKCSH-216ENST00000592445 ZNF428Q96B54 188 aa25.73■■□□□ 1.71
PRKCSH-216ENST00000592445 BABAM1Q9NWV8 329 aa25.73■■□□□ 1.71
PRKCSH-216ENST00000592445 PSMD14O00487 310 aa25.72■■□□□ 1.71
PRKCSH-216ENST00000592445 TBC1D10BQ4KMP7 808 aaPredicted RBP25.72■■□□□ 1.71
PRKCSH-216ENST00000592445 DBNDD1Q9H9R9 158 aa25.72■■□□□ 1.71
PRKCSH-216ENST00000592445 NSFL1CQ9UNZ2 370 aaKnown RBP25.72■■□□□ 1.71
PRKCSH-216ENST00000592445 RIMBP2O15034 1052 aa25.71■■□□□ 1.71
PRKCSH-216ENST00000592445 RGMBQ6NW40 437 aa25.71■■□□□ 1.71
PRKCSH-216ENST00000592445 C2orf69Q8N8R5 385 aa25.71■■□□□ 1.71
PRKCSH-216ENST00000592445 C6orf229H3BNL8 230 aa25.7■■□□□ 1.7
PRKCSH-216ENST00000592445 RBM26Q5T8P6 1007 aaKnown RBP25.7■■□□□ 1.7
PRKCSH-216ENST00000592445 DCPSQ96C86 337 aaKnown RBP25.7■■□□□ 1.7
PRKCSH-216ENST00000592445 GBA2Q9HCG7 927 aaPredicted RBP25.7■■□□□ 1.7
PRKCSH-216ENST00000592445 DUOX1Q9NRD9 1551 aa25.69■■□□□ 1.7
PRKCSH-216ENST00000592445 CCDC102AQ96A19 550 aa25.69■■□□□ 1.7
PRKCSH-216ENST00000592445 TAF1P21675 1872 aa25.68■■□□□ 1.7
PRKCSH-216ENST00000592445 LMOD3Q0VAK6 560 aa25.68■■□□□ 1.7
PRKCSH-216ENST00000592445 FAM155AB1AL88 458 aaPredicted RBP25.67■■□□□ 1.7
PRKCSH-216ENST00000592445 ADM5C9JUS6 153 aa25.67■■□□□ 1.7
PRKCSH-216ENST00000592445 EGFRP00533 1210 aa25.67■■□□□ 1.7
PRKCSH-216ENST00000592445 RPS12P25398 132 aaKnown RBP25.67■■□□□ 1.7
PRKCSH-216ENST00000592445 ZNF157P51786 506 aaPredicted RBP25.67■■□□□ 1.7
PRKCSH-216ENST00000592445 CELF1Q92879 486 aaKnown RBP25.67■■□□□ 1.7
PRKCSH-216ENST00000592445 SAGE1Q9NXZ1 904 aa25.67■■□□□ 1.7
PRKCSH-216ENST00000592445 KIF23Q02241 960 aaPredicted RBP25.66■■□□□ 1.7
PRKCSH-216ENST00000592445 DOK7Q18PE1 504 aa25.66■■□□□ 1.7
PRKCSH-216ENST00000592445 EYA3Q99504 573 aa25.66■■□□□ 1.7
PRKCSH-216ENST00000592445 TNRC18O15417 2968 aaPredicted RBP25.65■■□□□ 1.7
PRKCSH-216ENST00000592445 ECE2O60344 883 aa25.65■■□□□ 1.7
PRKCSH-216ENST00000592445 GPSM2P81274 684 aa25.65■■□□□ 1.7
PRKCSH-216ENST00000592445 FAM89AQ96GI7 184 aa25.65■■□□□ 1.7
PRKCSH-216ENST00000592445 POLLQ9UGP5 575 aa25.65■■□□□ 1.7
PRKCSH-216ENST00000592445 LRRC37AA6NMS7 1700 aa25.65■■□□□ 1.7
PRKCSH-216ENST00000592445 TMPOP42166 694 aaKnown RBP25.64■■□□□ 1.7
PRKCSH-216ENST00000592445 SF3B3Q15393 1217 aaKnown RBP25.64■■□□□ 1.7
PRKCSH-216ENST00000592445 KCNQ5Q9NR82 932 aa25.64■■□□□ 1.7
PRKCSH-216ENST00000592445 CHPF2Q9P2E5 772 aa25.64■■□□□ 1.7
PRKCSH-216ENST00000592445 TRPA1O75762 1119 aa25.63■■□□□ 1.69
PRKCSH-216ENST00000592445 KRT24Q2M2I5 525 aa25.63■■□□□ 1.69
PRKCSH-216ENST00000592445 SULF1Q8IWU6 871 aa25.63■■□□□ 1.69
PRKCSH-216ENST00000592445 PLBD2Q8NHP8 589 aa25.63■■□□□ 1.69
PRKCSH-216ENST00000592445 ATP5J2-PTCD1G3V325 749 aa25.62■■□□□ 1.69
PRKCSH-216ENST00000592445 KIF4BQ2VIQ3 1234 aa25.62■■□□□ 1.69
PRKCSH-216ENST00000592445 ANKRD13DQ6ZTN6 518 aa25.62■■□□□ 1.69
PRKCSH-216ENST00000592445 RNF186Q9NXI6 227 aa25.62■■□□□ 1.69
PRKCSH-216ENST00000592445 PCDH10Q9P2E7 1040 aa25.62■■□□□ 1.69
PRKCSH-216ENST00000592445 LAS1LQ9Y4W2 734 aaKnown RBP25.62■■□□□ 1.69
PRKCSH-216ENST00000592445 RTL9Q8NET4 1388 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms