RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 PGAP2Q9UHJ9 254 aa24.01■■□□□ 1.43
CIRBP-238ENST00000592412 COL4A1P02462 1669 aa24■■□□□ 1.43
CIRBP-238ENST00000592412 HIRAP54198 1017 aaPredicted RBP24■■□□□ 1.43
CIRBP-238ENST00000592412 GRM1Q13255 1194 aa24■■□□□ 1.43
CIRBP-238ENST00000592412 TCIRG1Q13488 830 aa24■■□□□ 1.43
CIRBP-238ENST00000592412 PAXIP1Q6ZW49 1069 aaPredicted RBP24■■□□□ 1.43
CIRBP-238ENST00000592412 MPNDQ8N594 471 aa24■■□□□ 1.43
CIRBP-238ENST00000592412 TMX4Q9H1E5 349 aaPredicted RBP24■■□□□ 1.43
CIRBP-238ENST00000592412 DDX60Q8IY21 1712 aaKnown RBP24■■□□□ 1.43
CIRBP-238ENST00000592412 YDJCA8MPS7 323 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 AOC2O75106 756 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 RAD17O75943 681 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 ECE1P42892 770 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 GRAPQ13588 217 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 HSP90AB3PQ58FF7 597 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 CIAPIN1Q6FI81 312 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 SAPCD2Q86UD0 394 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 GRAPLQ8TC17 118 aaPredicted RBP23.99■■□□□ 1.43
CIRBP-238ENST00000592412 ZNF428Q96B54 188 aa23.99■■□□□ 1.43
CIRBP-238ENST00000592412 GLIS2Q9BZE0 524 aaPredicted RBP23.99■■□□□ 1.43
CIRBP-238ENST00000592412 TRMT112Q9UI30 125 aaKnown RBP23.99■■□□□ 1.43
CIRBP-238ENST00000592412 SHTN1A0MZ66 631 aa23.98■■□□□ 1.43
CIRBP-238ENST00000592412 TRPM4Q8TD43 1214 aa23.98■■□□□ 1.43
CIRBP-238ENST00000592412 SH3TC1Q8TE82 1336 aa23.98■■□□□ 1.43
CIRBP-238ENST00000592412 CDHR2Q9BYE9 1310 aa23.98■■□□□ 1.43
CIRBP-238ENST00000592412 CHL1O00533 1208 aa23.97■■□□□ 1.43
CIRBP-238ENST00000592412 DDX46Q7L014 1031 aaKnown RBP23.97■■□□□ 1.43
CIRBP-238ENST00000592412 CELF2O95319 508 aaKnown RBP23.96■■□□□ 1.43
CIRBP-238ENST00000592412 CHPF2Q9P2E5 772 aa23.96■■□□□ 1.43
CIRBP-238ENST00000592412 LMOD3Q0VAK6 560 aa23.95■■□□□ 1.42
CIRBP-238ENST00000592412 TSKSQ9UJT2 592 aa23.95■■□□□ 1.42
CIRBP-238ENST00000592412 TRIM35Q9UPQ4 493 aa23.95■■□□□ 1.42
CIRBP-238ENST00000592412 CCDC146Q8IYE0 955 aa23.94■■□□□ 1.42
CIRBP-238ENST00000592412 MAP2K2P36507 400 aa23.93■■□□□ 1.42
CIRBP-238ENST00000592412 TNIP1Q15025 636 aa23.93■■□□□ 1.42
CIRBP-238ENST00000592412 RALBP1Q15311 655 aa23.93■■□□□ 1.42
CIRBP-238ENST00000592412 ZC3H15Q8WU90 426 aaKnown RBP23.93■■□□□ 1.42
CIRBP-238ENST00000592412 ISCA1Q9BUE6 129 aa23.93■■□□□ 1.42
CIRBP-238ENST00000592412 BCL2L13Q9BXK5 485 aa23.93■■□□□ 1.42
CIRBP-238ENST00000592412 NEUROD2Q15784 382 aa23.92■■□□□ 1.42
CIRBP-238ENST00000592412 DLK2Q6UY11 383 aa23.92■■□□□ 1.42
CIRBP-238ENST00000592412 CELF1Q92879 486 aaKnown RBP23.92■■□□□ 1.42
CIRBP-238ENST00000592412 HHIPL1Q96JK4 782 aa23.92■■□□□ 1.42
CIRBP-238ENST00000592412 CNOT7Q9UIV1 285 aaKnown RBP23.92■■□□□ 1.42
CIRBP-238ENST00000592412 BEGAINQ9BUH8 593 aa23.91■■□□□ 1.42
CIRBP-238ENST00000592412 ZBTB12Q9Y330 459 aaPredicted RBP23.91■■□□□ 1.42
CIRBP-238ENST00000592412 TMC4Q7Z404 712 aa23.9■■□□□ 1.42
CIRBP-238ENST00000592412 MICALL2Q8IY33 904 aa23.9■■□□□ 1.42
CIRBP-238ENST00000592412 PLBD2Q8NHP8 589 aa23.9■■□□□ 1.42
CIRBP-238ENST00000592412 FAM89AQ96GI7 184 aa23.9■■□□□ 1.42
CIRBP-238ENST00000592412 EGFRP00533 1210 aa23.89■■□□□ 1.41
CIRBP-238ENST00000592412 SF3B3Q15393 1217 aaKnown RBP23.89■■□□□ 1.41
CIRBP-238ENST00000592412 HDGFL1Q5TGJ6 251 aa23.89■■□□□ 1.41
CIRBP-238ENST00000592412 CDC37L1Q7L3B6 337 aa23.89■■□□□ 1.41
CIRBP-238ENST00000592412 ZNF408Q9H9D4 720 aa23.89■■□□□ 1.41
CIRBP-238ENST00000592412 ATP5J2-PTCD1G3V325 749 aa23.88■■□□□ 1.41
CIRBP-238ENST00000592412 PSMD14O00487 310 aa23.88■■□□□ 1.41
CIRBP-238ENST00000592412 ANKRD13DQ6ZTN6 518 aa23.88■■□□□ 1.41
CIRBP-238ENST00000592412 ZIC5Q96T25 663 aa23.88■■□□□ 1.41
CIRBP-238ENST00000592412 DBNDD1Q9H9R9 158 aa23.88■■□□□ 1.41
CIRBP-238ENST00000592412 POLLQ9UGP5 575 aa23.88■■□□□ 1.41
CIRBP-238ENST00000592412 LAS1LQ9Y4W2 734 aaKnown RBP23.88■■□□□ 1.41
CIRBP-238ENST00000592412 HOXB7P09629 217 aa23.87■■□□□ 1.41
CIRBP-238ENST00000592412 WASHC4Q2M389 1173 aa23.87■■□□□ 1.41
CIRBP-238ENST00000592412 FAM161AQ3B820 660 aa23.87■■□□□ 1.41
CIRBP-238ENST00000592412 SAMD7Q7Z3H4 446 aa23.87■■□□□ 1.41
CIRBP-238ENST00000592412 DPF2Q92785 391 aa23.87■■□□□ 1.41
CIRBP-238ENST00000592412 KCNQ5Q9NR82 932 aa23.87■■□□□ 1.41
CIRBP-238ENST00000592412 RTL9Q8NET4 1388 aa23.87■■□□□ 1.41
CIRBP-238ENST00000592412 BRPF1P55201 1214 aaPredicted RBP23.86■■□□□ 1.41
CIRBP-238ENST00000592412 GPSM2P81274 684 aa23.86■■□□□ 1.41
CIRBP-238ENST00000592412 USP48Q86UV5 1035 aa23.86■■□□□ 1.41
CIRBP-238ENST00000592412 RUNDC1Q96C34 613 aa23.86■■□□□ 1.41
CIRBP-238ENST00000592412 NSFL1CQ9UNZ2 370 aaKnown RBP23.86■■□□□ 1.41
CIRBP-238ENST00000592412 MYBBP1AQ9BQG0 1328 aaKnown RBP23.85■■□□□ 1.41
CIRBP-238ENST00000592412 H7C1D1 291 aa23.85■■□□□ 1.41
CIRBP-238ENST00000592412 RTL5Q5HYW3 569 aaPredicted RBP23.85■■□□□ 1.41
CIRBP-238ENST00000592412 DBF4Q9UBU7 674 aaPredicted RBP23.85■■□□□ 1.41
CIRBP-238ENST00000592412 RIMBP2O15034 1052 aa23.84■■□□□ 1.41
CIRBP-238ENST00000592412 TNRC18O15417 2968 aaPredicted RBP23.84■■□□□ 1.41
CIRBP-238ENST00000592412 SCN9AQ15858 1988 aa23.83■■□□□ 1.41
CIRBP-238ENST00000592412 CA12O43570 354 aa23.83■■□□□ 1.41
CIRBP-238ENST00000592412 TRIM28Q13263 835 aaKnown RBP23.83■■□□□ 1.41
CIRBP-238ENST00000592412 TBC1D10BQ4KMP7 808 aaPredicted RBP23.83■■□□□ 1.41
CIRBP-238ENST00000592412 CASP8AP2Q9UKL3 1982 aa23.83■■□□□ 1.41
CIRBP-238ENST00000592412 CCDC85CA6NKD9 419 aa23.82■■□□□ 1.4
CIRBP-238ENST00000592412 ECE2O60344 883 aa23.82■■□□□ 1.4
CIRBP-238ENST00000592412 DOK7Q18PE1 504 aa23.82■■□□□ 1.4
CIRBP-238ENST00000592412 DUSP27Q5VZP5 1158 aa23.82■■□□□ 1.4
CIRBP-238ENST00000592412 C6orf229H3BNL8 230 aa23.81■■□□□ 1.4
CIRBP-238ENST00000592412 IRS4O14654 1257 aaPredicted RBP23.81■■□□□ 1.4
CIRBP-238ENST00000592412 RGS19P49795 217 aa23.81■■□□□ 1.4
CIRBP-238ENST00000592412 HUNKP57058 714 aa23.81■■□□□ 1.4
CIRBP-238ENST00000592412 TBC1D16Q8TBP0 767 aa23.81■■□□□ 1.4
CIRBP-238ENST00000592412 CFAP44Q96MT7 982 aa23.81■■□□□ 1.4
CIRBP-238ENST00000592412 MCOLN1Q9GZU1 580 aa23.81■■□□□ 1.4
CIRBP-238ENST00000592412 HYPKQ9NX55 129 aa23.81■■□□□ 1.4
CIRBP-238ENST00000592412 ADAMTS8Q9UP79 889 aa23.81■■□□□ 1.4
CIRBP-238ENST00000592412 POLR2AP24928 1970 aaKnown RBP23.8■■□□□ 1.4
CIRBP-238ENST00000592412 ADM5C9JUS6 153 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms