RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 PAPPAQ13219 1627 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 ELL2O00472 640 aaPredicted RBP10.04□□□□□ -0.8
SDF2-210ENST00000592250 KCNQ3O43525 872 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 RNF40O75150 1001 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 OATP04181 439 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 DNAJB2P25686 324 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 CABP4P57796 275 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 EXOC6Q8TAG9 804 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 BCL2L13Q9BXK5 485 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 PPP4R2Q9NY27 417 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 TNNQ9UQP3 1299 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 LY75O60449 1722 aa10.04□□□□□ -0.8
SDF2-210ENST00000592250 RLBP1P12271 317 aa10.03□□□□□ -0.8
SDF2-210ENST00000592250 TEFQ10587 303 aa10.03□□□□□ -0.8
SDF2-210ENST00000592250 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
SDF2-210ENST00000592250 ARHGAP45Q92619 1136 aa10.03□□□□□ -0.8
SDF2-210ENST00000592250 CRBNQ96SW2 442 aa10.03□□□□□ -0.8
SDF2-210ENST00000592250 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
SDF2-210ENST00000592250 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
SDF2-210ENST00000592250 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
SDF2-210ENST00000592250 CACNA1FO60840 1977 aa10.03□□□□□ -0.8
SDF2-210ENST00000592250 PALLDQ8WX93 1383 aa10.02□□□□□ -0.8
SDF2-210ENST00000592250 BTBD11A6QL63 1104 aa10.02□□□□□ -0.81
SDF2-210ENST00000592250 HOXB7P09629 217 aa10.02□□□□□ -0.81
SDF2-210ENST00000592250 TRIM27P14373 513 aa10.02□□□□□ -0.81
SDF2-210ENST00000592250 C1QTNF8P60827 252 aa10.02□□□□□ -0.81
SDF2-210ENST00000592250 ZKSCAN2Q63HK3 967 aa10.02□□□□□ -0.81
SDF2-210ENST00000592250 FHDC1Q9C0D6 1143 aaPredicted RBP10.02□□□□□ -0.81
SDF2-210ENST00000592250 ASAP1Q9ULH1 1129 aa10.02□□□□□ -0.81
SDF2-210ENST00000592250 NOB1Q9ULX3 412 aaKnown RBP10.02□□□□□ -0.81
SDF2-210ENST00000592250 KIF16BQ96L93 1317 aa10.02□□□□□ -0.81
SDF2-210ENST00000592250 TXNRD1Q16881 649 aa10.01□□□□□ -0.81
SDF2-210ENST00000592250 ATF7IPQ6VMQ6 1270 aa10.01□□□□□ -0.81
SDF2-210ENST00000592250 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
SDF2-210ENST00000592250 STK32BQ9NY57 414 aa10.01□□□□□ -0.81
SDF2-210ENST00000592250 ZNF831Q5JPB2 1677 aa10.01□□□□□ -0.81
SDF2-210ENST00000592250 KCPQ6ZWJ8 1503 aa10.01□□□□□ -0.81
SDF2-210ENST00000592250 UBR2Q8IWV8 1755 aa10.01□□□□□ -0.81
SDF2-210ENST00000592250 CICQ96RK0 1608 aaPredicted RBP10□□□□□ -0.81
SDF2-210ENST00000592250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
SDF2-210ENST00000592250 GIGYF1O75420 1035 aaPredicted RBP10□□□□□ -0.81
SDF2-210ENST00000592250 SLC27A3Q5K4L6 730 aa10□□□□□ -0.81
SDF2-210ENST00000592250 ZNF790Q6PG37 636 aa10□□□□□ -0.81
SDF2-210ENST00000592250 PANK1Q8TE04 598 aa10□□□□□ -0.81
SDF2-210ENST00000592250 SMARCC1Q92922 1105 aaPredicted RBP10□□□□□ -0.81
SDF2-210ENST00000592250 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
SDF2-210ENST00000592250 IPO8O15397 1037 aaKnown RBP9.99□□□□□ -0.81
SDF2-210ENST00000592250 APLP1P51693 650 aa9.99□□□□□ -0.81
SDF2-210ENST00000592250 SLC39A6Q13433 755 aa9.99□□□□□ -0.81
SDF2-210ENST00000592250 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
SDF2-210ENST00000592250 DZIP1LQ8IYY4 767 aaKnown RBP9.99□□□□□ -0.81
SDF2-210ENST00000592250 FRAT1Q92837 279 aaPredicted RBP9.99□□□□□ -0.81
SDF2-210ENST00000592250 SLC4A9Q96Q91 983 aa9.99□□□□□ -0.81
SDF2-210ENST00000592250 PHOX2BQ99453 314 aa9.99□□□□□ -0.81
SDF2-210ENST00000592250 SYT17Q9BSW7 474 aa9.99□□□□□ -0.81
SDF2-210ENST00000592250 ABCC4O15439 1325 aa9.99□□□□□ -0.81
SDF2-210ENST00000592250 LOC102724428A0A0B4J2F2 783 aa9.98□□□□□ -0.81
SDF2-210ENST00000592250 TCERG1O14776 1098 aaKnown RBP9.98□□□□□ -0.81
SDF2-210ENST00000592250 ITGBL1O95965 494 aaPredicted RBP9.98□□□□□ -0.81
SDF2-210ENST00000592250 MS4A1P11836 297 aa9.98□□□□□ -0.81
SDF2-210ENST00000592250 SIK1P57059 783 aa9.98□□□□□ -0.81
SDF2-210ENST00000592250 GPR162Q16538 588 aa9.98□□□□□ -0.81
SDF2-210ENST00000592250 CCDC30Q5VVM6 783 aa9.98□□□□□ -0.81
SDF2-210ENST00000592250 G2E3Q7L622 706 aa9.98□□□□□ -0.81
SDF2-210ENST00000592250 CCNL1Q9UK58 526 aaPredicted RBP9.98□□□□□ -0.81
SDF2-210ENST00000592250 C5P01031 1676 aa9.97□□□□□ -0.81
SDF2-210ENST00000592250 TJP1Q07157 1748 aa9.97□□□□□ -0.81
SDF2-210ENST00000592250 KCNQ4P56696 695 aa9.97□□□□□ -0.81
SDF2-210ENST00000592250 AAMPQ13685 434 aa9.97□□□□□ -0.81
SDF2-210ENST00000592250 MVPQ14764 893 aaKnown RBP9.97□□□□□ -0.81
SDF2-210ENST00000592250 NLRP7Q8WX94 980 aa9.97□□□□□ -0.81
SDF2-210ENST00000592250 ZNF496Q96IT1 587 aaPredicted RBP9.97□□□□□ -0.81
SDF2-210ENST00000592250 COG6Q9Y2V7 657 aa9.97□□□□□ -0.81
SDF2-210ENST00000592250 PTPRCP08575 1304 aa9.97□□□□□ -0.81
SDF2-210ENST00000592250 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.81
SDF2-210ENST00000592250 PRAMEF22A3QJZ6 481 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 PTCD1O75127 700 aaKnown RBP9.96□□□□□ -0.82
SDF2-210ENST00000592250 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 SLC4A3P48751 1232 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 ITPK1Q13572 414 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 B4GALNT3Q6L9W6 998 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 LRP10Q7Z4F1 713 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 TTC5Q8N0Z6 440 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 TMEM57Q8N5G2 664 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 API5Q9BZZ5 524 aaKnown RBP9.96□□□□□ -0.82
SDF2-210ENST00000592250 CASZ1Q86V15 1759 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 TAF1LQ8IZX4 1826 aa9.96□□□□□ -0.82
SDF2-210ENST00000592250 IRF6O14896 467 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 MAP2K5Q13163 448 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 SLC15A2Q16348 729 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 HDGFL1Q5TGJ6 251 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 INTS3Q68E01 1043 aaKnown RBP9.95□□□□□ -0.82
SDF2-210ENST00000592250 LINC00116Q8NCU8 138 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 ARXQ96QS3 562 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 CHMP4AQ9BY43 222 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 MTFR1LQ9H019 292 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 C4BP0C0L5 1744 aa9.95□□□□□ -0.82
SDF2-210ENST00000592250 KAT6BQ8WYB5 2073 aa9.94□□□□□ -0.82
SDF2-210ENST00000592250 KDM2BQ8NHM5 1336 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms