RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 BCS1LQ9Y276 419 aa12.29□□□□□ -0.44
TPM4-215ENST00000592138 RTL9Q8NET4 1388 aa12.29□□□□□ -0.44
TPM4-215ENST00000592138 YBX3P16989 372 aaKnown RBP eCLIP12.28□□□□□ -0.44
TPM4-215ENST00000592138 CCDC152Q4G0S7 254 aa12.28□□□□□ -0.44
TPM4-215ENST00000592138 SOGA3Q5TF21 947 aa12.28□□□□□ -0.44
TPM4-215ENST00000592138 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
TPM4-215ENST00000592138 UBE3BQ7Z3V4 1068 aa12.28□□□□□ -0.44
TPM4-215ENST00000592138 FRAT1Q92837 279 aaPredicted RBP12.28□□□□□ -0.44
TPM4-215ENST00000592138 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
TPM4-215ENST00000592138 MS4A1P11836 297 aa12.27□□□□□ -0.45
TPM4-215ENST00000592138 CTSWP56202 376 aa12.27□□□□□ -0.45
TPM4-215ENST00000592138 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
TPM4-215ENST00000592138 RTL5Q5HYW3 569 aaPredicted RBP12.27□□□□□ -0.45
TPM4-215ENST00000592138 DDX46Q7L014 1031 aaKnown RBP12.27□□□□□ -0.45
TPM4-215ENST00000592138 TMC4Q7Z404 712 aa12.27□□□□□ -0.45
TPM4-215ENST00000592138 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.45
TPM4-215ENST00000592138 BBOX1O75936 387 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 CSF1RP07333 972 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 GRAPQ13588 217 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 TTLL11Q8NHH1 800 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 GRAPLQ8TC17 118 aaPredicted RBP12.26□□□□□ -0.45
TPM4-215ENST00000592138 C7orf43Q8WVR3 580 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 HDAC5Q9UQL6 1122 aa12.26□□□□□ -0.45
TPM4-215ENST00000592138 ARFGEF1Q9Y6D6 1849 aa12.25□□□□□ -0.45
TPM4-215ENST00000592138 NBPF7P0C2Y1 421 aaPredicted RBP12.25□□□□□ -0.45
TPM4-215ENST00000592138 FTSJ3Q8IY81 847 aaKnown RBP12.25□□□□□ -0.45
TPM4-215ENST00000592138 DZIP1LQ8IYY4 767 aaKnown RBP12.25□□□□□ -0.45
TPM4-215ENST00000592138 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
TPM4-215ENST00000592138 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.25□□□□□ -0.45
TPM4-215ENST00000592138 PPEF1O14829 653 aaPredicted RBP12.24□□□□□ -0.45
TPM4-215ENST00000592138 FOXO4P98177 505 aa12.24□□□□□ -0.45
TPM4-215ENST00000592138 RABL6Q3YEC7 729 aaPredicted RBP12.24□□□□□ -0.45
TPM4-215ENST00000592138 SNED1Q8TER0 1413 aa12.24□□□□□ -0.45
TPM4-215ENST00000592138 JARID2Q92833 1246 aaPredicted RBP12.24□□□□□ -0.45
TPM4-215ENST00000592138 LTBP3Q9NS15 1303 aa12.24□□□□□ -0.45
TPM4-215ENST00000592138 GNAI3P08754 354 aa12.23□□□□□ -0.45
TPM4-215ENST00000592138 CCDC93Q567U6 631 aa12.23□□□□□ -0.45
TPM4-215ENST00000592138 RTKN2Q8IZC4 609 aa12.23□□□□□ -0.45
TPM4-215ENST00000592138 KAZALD1Q96I82 304 aa12.23□□□□□ -0.45
TPM4-215ENST00000592138 CDC5LQ99459 802 aaKnown RBP12.23□□□□□ -0.45
TPM4-215ENST00000592138 ATP6V0A2Q9Y487 856 aa12.23□□□□□ -0.45
TPM4-215ENST00000592138 C21orf2O43822 256 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 UBTFL1P0CB47 393 aaPredicted RBP12.22□□□□□ -0.45
TPM4-215ENST00000592138 HSPA6P17066 643 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 RPS8P62241 208 aaKnown RBP12.22□□□□□ -0.45
TPM4-215ENST00000592138 PDE3AQ14432 1141 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 CLUAP1Q96AJ1 413 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 SUCLG2Q96I99 432 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 TMX4Q9H1E5 349 aaPredicted RBP12.22□□□□□ -0.45
TPM4-215ENST00000592138 GREM2Q9H772 168 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
TPM4-215ENST00000592138 SLX4Q8IY92 1834 aa12.21□□□□□ -0.45
TPM4-215ENST00000592138 RLBP1P12271 317 aa12.21□□□□□ -0.45
TPM4-215ENST00000592138 ITGA6P23229 1130 aa12.21□□□□□ -0.45
TPM4-215ENST00000592138 EPHA10Q5JZY3 1008 aa12.21□□□□□ -0.45
TPM4-215ENST00000592138 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.45
TPM4-215ENST00000592138 CELF1Q92879 486 aaKnown RBP12.21□□□□□ -0.45
TPM4-215ENST00000592138 PSMD1Q99460 953 aa12.21□□□□□ -0.45
TPM4-215ENST00000592138 SEC31BQ9NQW1 1179 aa12.21□□□□□ -0.45
TPM4-215ENST00000592138 LRRC37AA6NMS7 1700 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 MYH3P11055 1940 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 ANKRD18BA2A2Z9 1011 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 NFKBIEO00221 500 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 FKBP4Q02790 459 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM4-215ENST00000592138 IFIT5Q13325 482 aaKnown RBP12.2□□□□□ -0.46
TPM4-215ENST00000592138 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 LMBR1LQ6UX01 489 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 MEIS3Q99687 375 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 VPS33BQ9H267 617 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
TPM4-215ENST00000592138 BICC1Q9H694 974 aaKnown RBP12.2□□□□□ -0.46
TPM4-215ENST00000592138 BSDC1Q9NW68 430 aaPredicted RBP12.2□□□□□ -0.46
TPM4-215ENST00000592138 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
TPM4-215ENST00000592138 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
TPM4-215ENST00000592138 IGHMBP2P38935 993 aaKnown RBP12.19□□□□□ -0.46
TPM4-215ENST00000592138 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
TPM4-215ENST00000592138 CCDC57Q2TAC2 916 aa12.19□□□□□ -0.46
TPM4-215ENST00000592138 ITPRIPQ8IWB1 547 aa12.19□□□□□ -0.46
TPM4-215ENST00000592138 ANKRD44Q8N8A2 993 aa12.19□□□□□ -0.46
TPM4-215ENST00000592138 RTFDC1Q9BY42 306 aaPredicted RBP12.19□□□□□ -0.46
TPM4-215ENST00000592138 CHMP4BQ9H444 224 aaKnown RBP12.19□□□□□ -0.46
TPM4-215ENST00000592138 PODXL2Q9NZ53 605 aa12.19□□□□□ -0.46
TPM4-215ENST00000592138 GNAI2P04899 355 aa12.18□□□□□ -0.46
TPM4-215ENST00000592138 RRP1P56182 461 aaKnown RBP12.18□□□□□ -0.46
TPM4-215ENST00000592138 MTX1Q13505 466 aa12.18□□□□□ -0.46
TPM4-215ENST00000592138 SUPT20HQ8NEM7 779 aa12.18□□□□□ -0.46
TPM4-215ENST00000592138 CCDC85AQ96PX6 553 aaPredicted RBP12.18□□□□□ -0.46
TPM4-215ENST00000592138 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
TPM4-215ENST00000592138 COL4A1P02462 1669 aa12.18□□□□□ -0.46
TPM4-215ENST00000592138 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
TPM4-215ENST00000592138 PLIN1O60240 522 aa12.17□□□□□ -0.46
TPM4-215ENST00000592138 LMNB1P20700 586 aa12.17□□□□□ -0.46
TPM4-215ENST00000592138 PANK1Q8TE04 598 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms