RNA–Protein interactions for RNA: ENST00000591745.1

LSM7-207, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 543 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-207ENST00000591745 KSR2Q6VAB6 950 aa17.34■□□□□ 0.37
LSM7-207ENST00000591745 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
LSM7-207ENST00000591745 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
LSM7-207ENST00000591745 ZNF496Q96IT1 587 aaPredicted RBP17.34■□□□□ 0.37
LSM7-207ENST00000591745 TAOK3Q9H2K8 898 aa17.34■□□□□ 0.37
LSM7-207ENST00000591745 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
LSM7-207ENST00000591745 RASSF10A6NK89 507 aa17.33■□□□□ 0.36
LSM7-207ENST00000591745 GNAI2P04899 355 aa17.33■□□□□ 0.36
LSM7-207ENST00000591745 FMR1Q06787 632 aaKnown RBP eCLIP17.33■□□□□ 0.36
LSM7-207ENST00000591745 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.36
LSM7-207ENST00000591745 SRCIN1Q9C0H9 1055 aa17.33■□□□□ 0.36
LSM7-207ENST00000591745 TNNQ9UQP3 1299 aa17.33■□□□□ 0.36
LSM7-207ENST00000591745 LAMB4A4D0S4 1761 aa17.33■□□□□ 0.36
LSM7-207ENST00000591745 KCNQ3O43525 872 aa17.32■□□□□ 0.36
LSM7-207ENST00000591745 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
LSM7-207ENST00000591745 IGHDP01880 384 aa17.32■□□□□ 0.36
LSM7-207ENST00000591745 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
LSM7-207ENST00000591745 SLC4A10Q6U841 1118 aa17.32■□□□□ 0.36
LSM7-207ENST00000591745 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
LSM7-207ENST00000591745 COL4A5P29400 1685 aa17.32■□□□□ 0.36
LSM7-207ENST00000591745 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
LSM7-207ENST00000591745 RGS19P49795 217 aa17.31■□□□□ 0.36
LSM7-207ENST00000591745 EAPPQ56P03 285 aaPredicted RBP17.31■□□□□ 0.36
LSM7-207ENST00000591745 OLFM4Q6UX06 510 aa17.31■□□□□ 0.36
LSM7-207ENST00000591745 G2E3Q7L622 706 aa17.31■□□□□ 0.36
LSM7-207ENST00000591745 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
LSM7-207ENST00000591745 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
LSM7-207ENST00000591745 CASP8AP2Q9UKL3 1982 aa17.31■□□□□ 0.36
LSM7-207ENST00000591745 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
LSM7-207ENST00000591745 CCDC85CA6NKD9 419 aa17.3■□□□□ 0.36
LSM7-207ENST00000591745 STARD3NLO95772 234 aa17.3■□□□□ 0.36
LSM7-207ENST00000591745 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
LSM7-207ENST00000591745 MLLT1Q03111 559 aaPredicted RBP17.3■□□□□ 0.36
LSM7-207ENST00000591745 POLA2Q14181 598 aa17.3■□□□□ 0.36
LSM7-207ENST00000591745 MAP1SQ66K74 1059 aaPredicted RBP17.3■□□□□ 0.36
LSM7-207ENST00000591745 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
LSM7-207ENST00000591745 BRIP1Q9BX63 1249 aa17.3■□□□□ 0.36
LSM7-207ENST00000591745 LINS1Q8NG48 757 aa17.29■□□□□ 0.36
LSM7-207ENST00000591745 PCDH10Q9P2E7 1040 aa17.29■□□□□ 0.36
LSM7-207ENST00000591745 TSKSQ9UJT2 592 aa17.29■□□□□ 0.36
LSM7-207ENST00000591745 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
LSM7-207ENST00000591745 DEFB115Q30KQ5 88 aa17.28■□□□□ 0.36
LSM7-207ENST00000591745 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
LSM7-207ENST00000591745 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
LSM7-207ENST00000591745 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
LSM7-207ENST00000591745 UBTFL1P0CB47 393 aaPredicted RBP17.27■□□□□ 0.36
LSM7-207ENST00000591745 SRGNP10124 158 aa17.27■□□□□ 0.36
LSM7-207ENST00000591745 PDE6BP35913 854 aa17.27■□□□□ 0.36
LSM7-207ENST00000591745 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
LSM7-207ENST00000591745 TBC1D2BQ9UPU7 963 aa17.27■□□□□ 0.36
LSM7-207ENST00000591745 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
LSM7-207ENST00000591745 NUCB1Q02818 461 aa17.26■□□□□ 0.35
LSM7-207ENST00000591745 PDIA6Q15084 440 aa17.26■□□□□ 0.35
LSM7-207ENST00000591745 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
LSM7-207ENST00000591745 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
LSM7-207ENST00000591745 RIC3Q7Z5B4 369 aa17.26■□□□□ 0.35
LSM7-207ENST00000591745 NECTIN2Q92692 538 aa17.26■□□□□ 0.35
LSM7-207ENST00000591745 SNED1Q8TER0 1413 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 F6X3S4 739 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 EPHX2P34913 555 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
LSM7-207ENST00000591745 STYK1Q6J9G0 422 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 PLBD2Q8NHP8 589 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 DCTPP1Q9H773 170 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 ZNF277Q9NRM2 450 aaPredicted RBP17.25■□□□□ 0.35
LSM7-207ENST00000591745 HACL1Q9UJ83 578 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
LSM7-207ENST00000591745 PDE4DIPQ5VU43 2346 aa17.24■□□□□ 0.35
LSM7-207ENST00000591745 HSP90AB4PQ58FF6 505 aa17.24■□□□□ 0.35
LSM7-207ENST00000591745 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
LSM7-207ENST00000591745 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
LSM7-207ENST00000591745 MAP3K2Q9Y2U5 619 aa17.24■□□□□ 0.35
LSM7-207ENST00000591745 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
LSM7-207ENST00000591745 UTYO14607 1347 aa17.23■□□□□ 0.35
LSM7-207ENST00000591745 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
LSM7-207ENST00000591745 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
LSM7-207ENST00000591745 CYP4F22Q6NT55 531 aa17.23■□□□□ 0.35
LSM7-207ENST00000591745 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
LSM7-207ENST00000591745 MEIS3Q99687 375 aa17.23■□□□□ 0.35
LSM7-207ENST00000591745 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
LSM7-207ENST00000591745 USP44Q9H0E7 712 aa17.23■□□□□ 0.35
LSM7-207ENST00000591745 TSHZ2Q9NRE2 1034 aa17.23■□□□□ 0.35
LSM7-207ENST00000591745 MAP2K1Q02750 393 aaPredicted RBP17.22■□□□□ 0.35
LSM7-207ENST00000591745 COPS6Q7L5N1 327 aa17.22■□□□□ 0.35
LSM7-207ENST00000591745 CHD1LQ86WJ1 897 aa17.22■□□□□ 0.35
LSM7-207ENST00000591745 CNKSR1Q969H4 720 aa17.22■□□□□ 0.35
LSM7-207ENST00000591745 C9orf78Q9NZ63 289 aaPredicted RBP17.22■□□□□ 0.35
LSM7-207ENST00000591745 ABT1Q9ULW3 272 aaKnown RBP17.22■□□□□ 0.35
LSM7-207ENST00000591745 PDZRN3Q9UPQ7 1066 aa17.22■□□□□ 0.35
LSM7-207ENST00000591745 ZBTB12Q9Y330 459 aaPredicted RBP17.22■□□□□ 0.35
LSM7-207ENST00000591745 AOC2O75106 756 aa17.21■□□□□ 0.35
LSM7-207ENST00000591745 CNBD1Q8NA66 436 aa17.21■□□□□ 0.35
LSM7-207ENST00000591745 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.35
LSM7-207ENST00000591745 MASTLQ96GX5 879 aa17.21■□□□□ 0.35
LSM7-207ENST00000591745 CAPNS2Q96L46 248 aa17.21■□□□□ 0.35
LSM7-207ENST00000591745 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.35
LSM7-207ENST00000591745 RGL2O15211 777 aa17.2■□□□□ 0.34
LSM7-207ENST00000591745 RAB11FIP3O75154 756 aa17.2■□□□□ 0.34
LSM7-207ENST00000591745 FKBP4Q02790 459 aaKnown RBP eCLIP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms