RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 PDE8AO60658 829 aa20.92■□□□□ 0.94
CIRBP-233ENST00000591622 SP8Q8IXZ3 490 aa20.92■□□□□ 0.94
CIRBP-233ENST00000591622 LINS1Q8NG48 757 aa20.92■□□□□ 0.94
CIRBP-233ENST00000591622 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
CIRBP-233ENST00000591622 GCKRQ14397 625 aa20.91■□□□□ 0.94
CIRBP-233ENST00000591622 DPY19L2Q6NUT2 758 aa20.91■□□□□ 0.94
CIRBP-233ENST00000591622 TMC4Q7Z404 712 aa20.91■□□□□ 0.94
CIRBP-233ENST00000591622 TIAM2Q8IVF5 1701 aa20.91■□□□□ 0.94
CIRBP-233ENST00000591622 F6X3S4 739 aa20.9■□□□□ 0.94
CIRBP-233ENST00000591622 H7C1W4 665 aa20.9■□□□□ 0.94
CIRBP-233ENST00000591622 CELF1Q92879 486 aaKnown RBP20.9■□□□□ 0.94
CIRBP-233ENST00000591622 CCDC152Q4G0S7 254 aa20.89■□□□□ 0.93
CIRBP-233ENST00000591622 RRAGCQ9HB90 399 aa20.89■□□□□ 0.93
CIRBP-233ENST00000591622 UBE3BQ7Z3V4 1068 aa20.88■□□□□ 0.93
CIRBP-233ENST00000591622 MRPL50Q8N5N7 158 aaKnown RBP20.88■□□□□ 0.93
CIRBP-233ENST00000591622 CACNA1FO60840 1977 aa20.87■□□□□ 0.93
CIRBP-233ENST00000591622 RPS8P62241 208 aaKnown RBP20.87■□□□□ 0.93
CIRBP-233ENST00000591622 BEND3Q5T5X7 828 aa20.87■□□□□ 0.93
CIRBP-233ENST00000591622 DPP8Q6V1X1 898 aaPredicted RBP20.87■□□□□ 0.93
CIRBP-233ENST00000591622 MPNDQ8N594 471 aa20.87■□□□□ 0.93
CIRBP-233ENST00000591622 SSH1Q8WYL5 1049 aa20.87■□□□□ 0.93
CIRBP-233ENST00000591622 RTFDC1Q9BY42 306 aaPredicted RBP20.87■□□□□ 0.93
CIRBP-233ENST00000591622 SEC31BQ9NQW1 1179 aa20.87■□□□□ 0.93
CIRBP-233ENST00000591622 CCDC88AQ3V6T2 1871 aa20.87■□□□□ 0.93
CIRBP-233ENST00000591622 TOMM70O94826 608 aa20.86■□□□□ 0.93
CIRBP-233ENST00000591622 CTSWP56202 376 aa20.86■□□□□ 0.93
CIRBP-233ENST00000591622 SUPT20HQ8NEM7 779 aa20.86■□□□□ 0.93
CIRBP-233ENST00000591622 JDP2Q8WYK2 163 aa20.86■□□□□ 0.93
CIRBP-233ENST00000591622 DICER1Q9UPY3 1922 aaKnown RBP20.86■□□□□ 0.93
CIRBP-233ENST00000591622 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-233ENST00000591622 VEGFAP15692 232 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-233ENST00000591622 CASP7P55210 303 aa20.85■□□□□ 0.93
CIRBP-233ENST00000591622 ALDH1L2Q3SY69 923 aa20.85■□□□□ 0.93
CIRBP-233ENST00000591622 TTLL11Q8NHH1 800 aa20.85■□□□□ 0.93
CIRBP-233ENST00000591622 CCDC85AQ96PX6 553 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-233ENST00000591622 VPS33BQ9H267 617 aa20.85■□□□□ 0.93
CIRBP-233ENST00000591622 FZD9O00144 591 aa20.84■□□□□ 0.93
CIRBP-233ENST00000591622 DDNO94850 711 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-233ENST00000591622 C16orf71Q8IYS4 520 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-233ENST00000591622 LARGE2Q8N3Y3 721 aa20.84■□□□□ 0.93
CIRBP-233ENST00000591622 COL4A1P02462 1669 aa20.83■□□□□ 0.93
CIRBP-233ENST00000591622 PTPRCP08575 1304 aa20.83■□□□□ 0.93
CIRBP-233ENST00000591622 PPIP5K2O43314 1243 aa20.83■□□□□ 0.93
CIRBP-233ENST00000591622 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.93
CIRBP-233ENST00000591622 SLC4A10Q6U841 1118 aa20.83■□□□□ 0.93
CIRBP-233ENST00000591622 PLA2G12BQ9BX93 195 aa20.83■□□□□ 0.93
CIRBP-233ENST00000591622 ZNF541Q9H0D2 1346 aa20.82■□□□□ 0.92
CIRBP-233ENST00000591622 POTECB2RU33 542 aa20.82■□□□□ 0.92
CIRBP-233ENST00000591622 AOC3Q16853 763 aa20.82■□□□□ 0.92
CIRBP-233ENST00000591622 BCL2L13Q9BXK5 485 aa20.82■□□□□ 0.92
CIRBP-233ENST00000591622 NSFL1CQ9UNZ2 370 aaKnown RBP20.82■□□□□ 0.92
CIRBP-233ENST00000591622 COL4A5P29400 1685 aa20.82■□□□□ 0.92
CIRBP-233ENST00000591622 TAF1P21675 1872 aa20.81■□□□□ 0.92
CIRBP-233ENST00000591622 LRRC37AA6NMS7 1700 aa20.81■□□□□ 0.92
CIRBP-233ENST00000591622 ALDH1L1O75891 902 aa20.81■□□□□ 0.92
CIRBP-233ENST00000591622 SRCIN1Q9C0H9 1055 aa20.81■□□□□ 0.92
CIRBP-233ENST00000591622 GREM2Q9H772 168 aa20.81■□□□□ 0.92
CIRBP-233ENST00000591622 SMC4Q9NTJ3 1288 aa20.81■□□□□ 0.92
CIRBP-233ENST00000591622 RTL9Q8NET4 1388 aa20.81■□□□□ 0.92
CIRBP-233ENST00000591622 GPSM2P81274 684 aa20.8■□□□□ 0.92
CIRBP-233ENST00000591622 KIAA2012Q0VF49 1180 aa20.8■□□□□ 0.92
CIRBP-233ENST00000591622 ANKRD18AQ8IVF6 992 aa20.8■□□□□ 0.92
CIRBP-233ENST00000591622 NIM1KQ8IY84 436 aa20.8■□□□□ 0.92
CIRBP-233ENST00000591622 RBM46Q8TBY0 533 aaKnown RBP20.8■□□□□ 0.92
CIRBP-233ENST00000591622 CDC5LQ99459 802 aaKnown RBP20.8■□□□□ 0.92
CIRBP-233ENST00000591622 WDR90Q96KV7 1748 aa20.8■□□□□ 0.92
CIRBP-233ENST00000591622 GRM8O00222 908 aa20.79■□□□□ 0.92
CIRBP-233ENST00000591622 CSF1RP07333 972 aa20.79■□□□□ 0.92
CIRBP-233ENST00000591622 EIF6P56537 245 aaKnown RBP20.79■□□□□ 0.92
CIRBP-233ENST00000591622 GPC2Q8N158 579 aa20.79■□□□□ 0.92
CIRBP-233ENST00000591622 L3MBTL3Q96JM7 780 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-233ENST00000591622 DUOX1Q9NRD9 1551 aa20.78■□□□□ 0.92
CIRBP-233ENST00000591622 PODXL2Q9NZ53 605 aa20.78■□□□□ 0.92
CIRBP-233ENST00000591622 C9orf78Q9NZ63 289 aaPredicted RBP20.78■□□□□ 0.92
CIRBP-233ENST00000591622 FOXO4P98177 505 aa20.77■□□□□ 0.92
CIRBP-233ENST00000591622 POLLQ9UGP5 575 aa20.77■□□□□ 0.92
CIRBP-233ENST00000591622 ZNRF3Q9ULT6 936 aa20.77■□□□□ 0.92
CIRBP-233ENST00000591622 IQCA1LA6NCM1 817 aa20.76■□□□□ 0.91
CIRBP-233ENST00000591622 C6orf229H3BNL8 230 aa20.76■□□□□ 0.91
CIRBP-233ENST00000591622 WASHC4Q2M389 1173 aa20.76■□□□□ 0.91
CIRBP-233ENST00000591622 TBC1D16Q8TBP0 767 aa20.76■□□□□ 0.91
CIRBP-233ENST00000591622 BSDC1Q9NW68 430 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-233ENST00000591622 ANKIB1Q9P2G1 1089 aa20.76■□□□□ 0.91
CIRBP-233ENST00000591622 ITGA6P23229 1130 aa20.75■□□□□ 0.91
CIRBP-233ENST00000591622 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
CIRBP-233ENST00000591622 BRPF1P55201 1214 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-233ENST00000591622 FSTL1Q12841 308 aa20.75■□□□□ 0.91
CIRBP-233ENST00000591622 FAM161AQ3B820 660 aa20.75■□□□□ 0.91
CIRBP-233ENST00000591622 GJA3Q9Y6H8 435 aa20.75■□□□□ 0.91
CIRBP-233ENST00000591622 EYA3Q99504 573 aa20.74■□□□□ 0.91
CIRBP-233ENST00000591622 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
CIRBP-233ENST00000591622 RIMBP2O15034 1052 aa20.73■□□□□ 0.91
CIRBP-233ENST00000591622 NBPF7P0C2Y1 421 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-233ENST00000591622 HSPA6P17066 643 aa20.73■□□□□ 0.91
CIRBP-233ENST00000591622 IGHMBP2P38935 993 aaKnown RBP20.73■□□□□ 0.91
CIRBP-233ENST00000591622 CXCL9Q07325 125 aa20.73■□□□□ 0.91
CIRBP-233ENST00000591622 EPHA10Q5JZY3 1008 aa20.73■□□□□ 0.91
CIRBP-233ENST00000591622 SMC1BQ8NDV3 1235 aa20.73■□□□□ 0.91
CIRBP-233ENST00000591622 GGA1Q9UJY5 639 aa20.73■□□□□ 0.91
CIRBP-233ENST00000591622 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms