RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 NUTM2GQ5VZR2 741 aa14.29□□□□□ -0.12
SMARCA4-217ENST00000591595 NAIF1Q69YI7 327 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-217ENST00000591595 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-217ENST00000591595 BRD1O95696 1058 aa14.29□□□□□ -0.12
SMARCA4-217ENST00000591595 RBM5P52756 815 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMARCA4-217ENST00000591595 FAM210AQ96ND0 272 aa14.29□□□□□ -0.12
SMARCA4-217ENST00000591595 MNAT1P51948 309 aa14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 UNC5CLQ8IV45 518 aa14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 ZCCHC17Q9NP64 241 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 ERBB3P21860 1342 aa14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 DLG5Q8TDM6 1919 aa14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 SLU7O95391 586 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 EIF2S2P20042 333 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 LEKR1Q6ZMV7 388 aa14.28□□□□□ -0.12
SMARCA4-217ENST00000591595 CTAGE5O15320 804 aa14.27□□□□□ -0.12
SMARCA4-217ENST00000591595 IPO7O95373 1038 aaKnown RBP14.27□□□□□ -0.12
SMARCA4-217ENST00000591595 OAS2P29728 719 aaKnown RBP14.27□□□□□ -0.12
SMARCA4-217ENST00000591595 EYA1Q99502 592 aa14.27□□□□□ -0.12
SMARCA4-217ENST00000591595 CPP00450 1065 aa14.27□□□□□ -0.13
SMARCA4-217ENST00000591595 CORO7P57737 925 aa14.27□□□□□ -0.13
SMARCA4-217ENST00000591595 FAXDC2Q96IV6 333 aa14.27□□□□□ -0.13
SMARCA4-217ENST00000591595 SRCIN1Q9C0H9 1055 aa14.27□□□□□ -0.13
SMARCA4-217ENST00000591595 NUCKS1Q9H1E3 243 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-217ENST00000591595 ZSCAN16Q9H4T2 348 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-217ENST00000591595 RICTORQ6R327 1708 aa14.27□□□□□ -0.13
SMARCA4-217ENST00000591595 AP5Z1O43299 807 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 NEBLO76041 1014 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 LRMPQ12912 555 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 REXO1L1PQ8IX06 675 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 SLC24A3Q9HC58 644 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 RPS6KL1Q9Y6S9 549 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 ROBO2Q9HCK4 1378 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 CRB1P82279 1406 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 NLRP6P59044 892 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 HDGFL1Q5TGJ6 251 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 EXOC4Q96A65 974 aa14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 PAIP2Q9BPZ3 127 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-217ENST00000591595 GADD45BO75293 160 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 IRX1P78414 480 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 CUL4AQ13619 759 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 TMCO3Q6UWJ1 677 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 PSD3Q9NYI0 1048 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 GNAT3A8MTJ3 354 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 KIF2AO00139 706 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 ZRSR1Q15695 479 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 MIEF2Q96C03 454 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 PDRG1Q9NUG6 133 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 CAND2O75155 1236 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 ZRANB2O95218 330 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 ERCC6LQ2NKX8 1250 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 JAKMIP3Q5VZ66 844 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 USP48Q86UV5 1035 aa14.25□□□□□ -0.13
SMARCA4-217ENST00000591595 ANKRD33BA6NCL7 494 aa14.24□□□□□ -0.13
SMARCA4-217ENST00000591595 SRGAP3O43295 1099 aa14.24□□□□□ -0.13
SMARCA4-217ENST00000591595 CCDC186Q7Z3E2 898 aa14.24□□□□□ -0.13
SMARCA4-217ENST00000591595 GIMAP7Q8NHV1 300 aa14.24□□□□□ -0.13
SMARCA4-217ENST00000591595 PIK3R5Q8WYR1 880 aa14.24□□□□□ -0.13
SMARCA4-217ENST00000591595 MAFGO15525 162 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 PPP1R42Q7Z4L9 355 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 ARGLU1Q9NWB6 273 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 IRAK4Q9NWZ3 460 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 PLEKHG3A1L390 1219 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 FIBPO43427 364 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 CWC27Q6UX04 472 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 UBXN6Q9BZV1 441 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 C21orf2O43822 256 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 DTNBO60941 627 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 EFCAB13Q8IY85 973 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 USP44Q9H0E7 712 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 FLT4P35916 1363 aa14.23□□□□□ -0.13
SMARCA4-217ENST00000591595 CCDC183Q5T5S1 534 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 IL25Q9H293 177 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 PHAXQ9H814 394 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 ADAM21Q9UKJ8 722 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 ANKRD65E5RJM6 399 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 MTA1Q13330 715 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 PRPF38AQ8NAV1 312 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 SMC3Q9UQE7 1217 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 SOS1Q07889 1333 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 USP6P35125 1406 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 CCT2P78371 535 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 TADA2BQ86TJ2 420 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 TACO1Q9BSH4 297 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 ETAA1Q9NY74 926 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 SPG7Q9UQ90 795 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 CNPY2Q9Y2B0 182 aa14.22□□□□□ -0.13
SMARCA4-217ENST00000591595 SALL3Q9BXA9 1300 aa14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 PTPN14Q15678 1187 aa14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 CNTROBQ8N137 903 aa14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 USHBP1Q8N6Y0 703 aa14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 ARHGEF10O15013 1369 aa14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 USP8P40818 1118 aa14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 SMC1AQ14683 1233 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 AP1ARQ63HQ0 302 aa14.21□□□□□ -0.13
SMARCA4-217ENST00000591595 FOXR1Q6PIV2 292 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms