RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 TNRC6CQ9HCJ0 1690 aaKnown RBP21.39■■□□□ 1.01
RPRD1A-209ENST00000590898 HOXA10P31260 410 aaPredicted RBP21.38■■□□□ 1.01
RPRD1A-209ENST00000590898 C3orf67Q6ZVT6 689 aa21.38■■□□□ 1.01
RPRD1A-209ENST00000590898 NPR1P16066 1061 aa21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 AAMPQ13685 434 aa21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 C2CD5Q86YS7 1000 aa21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 MASTLQ96GX5 879 aa21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 SYT17Q9BSW7 474 aa21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 PPP4R2Q9NY27 417 aa21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 EPHA10Q5JZY3 1008 aa21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 BICC1Q9H694 974 aaKnown RBP21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 RTL9Q8NET4 1388 aa21.37■■□□□ 1.01
RPRD1A-209ENST00000590898 KIAA1551Q9HCM1 1747 aa21.36■■□□□ 1.01
RPRD1A-209ENST00000590898 DLEC1Q9Y238 1755 aa21.36■■□□□ 1.01
RPRD1A-209ENST00000590898 STYK1Q6J9G0 422 aa21.36■■□□□ 1.01
RPRD1A-209ENST00000590898 LMBR1LQ6UX01 489 aa21.36■■□□□ 1.01
RPRD1A-209ENST00000590898 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
RPRD1A-209ENST00000590898 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
RPRD1A-209ENST00000590898 RPGRQ92834 1020 aaKnown RBP21.36■■□□□ 1.01
RPRD1A-209ENST00000590898 ALDH1B1P30837 517 aa21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 B4GALNT3Q6L9W6 998 aa21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 RBM17Q96I25 401 aaKnown RBP21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 CRAMP1Q96RY5 1269 aa21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 CRBNQ96SW2 442 aa21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 DPEP1P16444 411 aa21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 KCNA3P22001 575 aa21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 DDX46Q7L014 1031 aaKnown RBP21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 ANKRD44Q8N8A2 993 aa21.35■■□□□ 1.01
RPRD1A-209ENST00000590898 COL11A2P13942 1736 aaPredicted RBP21.34■■□□□ 1.01
RPRD1A-209ENST00000590898 A0A0G2JLW4 131 aa21.34■■□□□ 1.01
RPRD1A-209ENST00000590898 CHRNA5P30532 468 aa21.34■■□□□ 1.01
RPRD1A-209ENST00000590898 MTX1Q13505 466 aa21.34■■□□□ 1.01
RPRD1A-209ENST00000590898 BRCA1P38398 1863 aaKnown RBP21.34■■□□□ 1.01
RPRD1A-209ENST00000590898 CNKSR1Q969H4 720 aa21.33■■□□□ 1.01
RPRD1A-209ENST00000590898 GREM2Q9H772 168 aa21.33■■□□□ 1
RPRD1A-209ENST00000590898 ZNF622Q969S3 477 aaKnown RBP eCLIP21.32■■□□□ 14e-10■□□□□ 8.9
RPRD1A-209ENST00000590898 PIM2Q9P1W9 311 aa21.32■■□□□ 1
RPRD1A-209ENST00000590898 GOLGB1Q14789 3259 aaKnown RBP21.32■■□□□ 1
RPRD1A-209ENST00000590898 TAF1P21675 1872 aa21.32■■□□□ 1
RPRD1A-209ENST00000590898 NLGN2Q8NFZ4 835 aa21.31■■□□□ 1
RPRD1A-209ENST00000590898 BBOX1O75936 387 aa21.31■■□□□ 1
RPRD1A-209ENST00000590898 ITGA6P23229 1130 aa21.31■■□□□ 1
RPRD1A-209ENST00000590898 IFIT5Q13325 482 aaKnown RBP21.31■■□□□ 1
RPRD1A-209ENST00000590898 CCDC57Q2TAC2 916 aa21.31■■□□□ 1
RPRD1A-209ENST00000590898 RPAP2Q8IXW5 612 aaPredicted RBP21.31■■□□□ 1
RPRD1A-209ENST00000590898 CDC5LQ99459 802 aaKnown RBP21.31■■□□□ 1
RPRD1A-209ENST00000590898 ATP8B2P98198 1209 aa21.3■■□□□ 1
RPRD1A-209ENST00000590898 GRAPQ13588 217 aa21.3■■□□□ 1
RPRD1A-209ENST00000590898 FAM161AQ3B820 660 aa21.3■■□□□ 1
RPRD1A-209ENST00000590898 TTLL6Q8N841 843 aa21.3■■□□□ 1
RPRD1A-209ENST00000590898 GRAPLQ8TC17 118 aaPredicted RBP21.3■■□□□ 1
RPRD1A-209ENST00000590898 CCDC85AQ96PX6 553 aaPredicted RBP21.3■■□□□ 1
RPRD1A-209ENST00000590898 CHMP3Q9Y3E7 222 aa21.3■■□□□ 1
RPRD1A-209ENST00000590898 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
RPRD1A-209ENST00000590898 SEC31BQ9NQW1 1179 aa21.29■■□□□ 1
RPRD1A-209ENST00000590898 RPS8P62241 208 aaKnown RBP21.29■■□□□ 1
RPRD1A-209ENST00000590898 TMC4Q7Z404 712 aa21.29■■□□□ 1
RPRD1A-209ENST00000590898 C1orf115Q9H7X2 142 aa21.29■■□□□ 1
RPRD1A-209ENST00000590898 CACNA1SQ13698 1873 aa21.28■■□□□ 1
RPRD1A-209ENST00000590898 SLX4Q8IY92 1834 aa21.28■■□□□ 1
RPRD1A-209ENST00000590898 SRGAP3O43295 1099 aa21.27■■□□□ 1
RPRD1A-209ENST00000590898 CEP85Q6P2H3 762 aa21.27■■□□□ 1
RPRD1A-209ENST00000590898 DALRD3Q5D0E6 543 aaKnown RBP21.27■■□□□ 1
RPRD1A-209ENST00000590898 ANKRD18AQ8IVF6 992 aa21.27■■□□□ 1
RPRD1A-209ENST00000590898 CELF1Q92879 486 aaKnown RBP21.27■■□□□ 1
RPRD1A-209ENST00000590898 SSH3Q8TE77 659 aa21.26■□□□□ 0.99
RPRD1A-209ENST00000590898 IGHMBP2P38935 993 aaKnown RBP21.25■□□□□ 0.99
RPRD1A-209ENST00000590898 RFX5P48382 616 aaPredicted RBP21.25■□□□□ 0.99
RPRD1A-209ENST00000590898 PRPF40BQ6NWY9 871 aaKnown RBP21.25■□□□□ 0.99
RPRD1A-209ENST00000590898 PNMA6EA0A0J9YXQ4 647 aa21.25■□□□□ 0.99
RPRD1A-209ENST00000590898 POLA2Q14181 598 aa21.25■□□□□ 0.99
RPRD1A-209ENST00000590898 BSDC1Q9NW68 430 aaPredicted RBP21.25■□□□□ 0.99
RPRD1A-209ENST00000590898 FBXO3Q9UK99 471 aa21.25■□□□□ 0.99
RPRD1A-209ENST00000590898 ARFGEF1Q9Y6D6 1849 aa21.24■□□□□ 0.99
RPRD1A-209ENST00000590898 PTPN12Q05209 780 aaKnown RBP21.24■□□□□ 0.99
RPRD1A-209ENST00000590898 TAF7LQ5H9L4 462 aa21.24■□□□□ 0.99
RPRD1A-209ENST00000590898 COPRSQ9NQ92 184 aa21.24■□□□□ 0.99
RPRD1A-209ENST00000590898 HMMRO75330 724 aa21.23■□□□□ 0.99
RPRD1A-209ENST00000590898 CC2D2BQ6DHV5 1058 aa21.23■□□□□ 0.99
RPRD1A-209ENST00000590898 SP8Q8IXZ3 490 aa21.23■□□□□ 0.99
RPRD1A-209ENST00000590898 C7orf43Q8WVR3 580 aa21.23■□□□□ 0.99
RPRD1A-209ENST00000590898 MPHOSPH8Q99549 860 aa21.23■□□□□ 0.99
RPRD1A-209ENST00000590898 ATP6V0A2Q9Y487 856 aa21.23■□□□□ 0.99
RPRD1A-209ENST00000590898 PPEF1O14829 653 aaPredicted RBP21.22■□□□□ 0.99
RPRD1A-209ENST00000590898 GRIPAP1Q4V328 841 aa21.22■□□□□ 0.99
RPRD1A-209ENST00000590898 LDHAL6AQ6ZMR3 332 aa21.22■□□□□ 0.99
RPRD1A-209ENST00000590898 SIRT2Q8IXJ6 389 aa21.22■□□□□ 0.99
RPRD1A-209ENST00000590898 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
RPRD1A-209ENST00000590898 PCDHB15Q9Y5E8 787 aa21.22■□□□□ 0.99
RPRD1A-209ENST00000590898 SOGA3Q5TF21 947 aa21.21■□□□□ 0.99
RPRD1A-209ENST00000590898 ZNF594Q96JF6 807 aaPredicted RBP21.21■□□□□ 0.99
RPRD1A-209ENST00000590898 TMX4Q9H1E5 349 aaPredicted RBP21.21■□□□□ 0.99
RPRD1A-209ENST00000590898 SPEF2Q9C093 1822 aa21.21■□□□□ 0.99
RPRD1A-209ENST00000590898 BCS1LQ9Y276 419 aa21.21■□□□□ 0.99
RPRD1A-209ENST00000590898 COL4A1P02462 1669 aa21.21■□□□□ 0.99
RPRD1A-209ENST00000590898 NOP58Q9Y2X3 529 aaKnown RBP21.19■□□□□ 0.98
RPRD1A-209ENST00000590898 RIPOR2Q9Y4F9 1068 aa21.19■□□□□ 0.98
RPRD1A-209ENST00000590898 EYA2O00167 538 aa21.19■□□□□ 0.98
RPRD1A-209ENST00000590898 CIAO1O76071 339 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms